RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 SRP68Q9UHB9 627 aaKnown RBP17.32■□□□□ 0.36
ATRX-208ENST00000622960 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
ATRX-208ENST00000622960 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
ATRX-208ENST00000622960 DDX10Q13206 875 aaKnown RBP17.31■□□□□ 0.36
ATRX-208ENST00000622960 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
ATRX-208ENST00000622960 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
ATRX-208ENST00000622960 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
ATRX-208ENST00000622960 USPL1Q5W0Q7 1092 aa17.3■□□□□ 0.36
ATRX-208ENST00000622960 MCM10Q7L590 875 aa17.3■□□□□ 0.36
ATRX-208ENST00000622960 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
ATRX-208ENST00000622960 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
ATRX-208ENST00000622960 FKBP8Q14318 412 aa17.29■□□□□ 0.36
ATRX-208ENST00000622960 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
ATRX-208ENST00000622960 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
ATRX-208ENST00000622960 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
ATRX-208ENST00000622960 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
ATRX-208ENST00000622960 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
ATRX-208ENST00000622960 PNISRQ8TF01 805 aaKnown RBP17.26■□□□□ 0.35
ATRX-208ENST00000622960 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
ATRX-208ENST00000622960 IL6STP40189 918 aaPredicted RBP17.25■□□□□ 0.35
ATRX-208ENST00000622960 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
ATRX-208ENST00000622960 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
ATRX-208ENST00000622960 SCN7AQ01118 1682 aa17.25■□□□□ 0.35
ATRX-208ENST00000622960 A0A0G2JLW4 131 aa17.24■□□□□ 0.35
ATRX-208ENST00000622960 POLRMTO00411 1230 aaKnown RBP17.24■□□□□ 0.35
ATRX-208ENST00000622960 NPHP1O15259 732 aa17.24■□□□□ 0.35
ATRX-208ENST00000622960 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
ATRX-208ENST00000622960 EIF5P55010 431 aaKnown RBP17.24■□□□□ 0.35
ATRX-208ENST00000622960 DDR1Q08345 913 aa17.24■□□□□ 0.35
ATRX-208ENST00000622960 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
ATRX-208ENST00000622960 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATRX-208ENST00000622960 DPEP1P16444 411 aa17.23■□□□□ 0.35
ATRX-208ENST00000622960 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
ATRX-208ENST00000622960 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
ATRX-208ENST00000622960 KIAA1551Q9HCM1 1747 aa17.23■□□□□ 0.35
ATRX-208ENST00000622960 DLG5Q8TDM6 1919 aa17.23■□□□□ 0.35
ATRX-208ENST00000622960 TM4SF1P30408 202 aa17.22■□□□□ 0.35
ATRX-208ENST00000622960 NFIXQ14938 502 aa17.22■□□□□ 0.35
ATRX-208ENST00000622960 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
ATRX-208ENST00000622960 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.35
ATRX-208ENST00000622960 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
ATRX-208ENST00000622960 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
ATRX-208ENST00000622960 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
ATRX-208ENST00000622960 CARMIL3Q8ND23 1372 aa17.2■□□□□ 0.34
ATRX-208ENST00000622960 KCNQ3O43525 872 aa17.2■□□□□ 0.34
ATRX-208ENST00000622960 A1BGP04217 495 aa17.2■□□□□ 0.34
ATRX-208ENST00000622960 SERPINB2P05120 415 aa17.2■□□□□ 0.34
ATRX-208ENST00000622960 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
ATRX-208ENST00000622960 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
ATRX-208ENST00000622960 TBC1D2BQ9UPU7 963 aa17.2■□□□□ 0.34
ATRX-208ENST00000622960 ATP10DQ9P241 1426 aa17.19■□□□□ 0.34
ATRX-208ENST00000622960 KDM3BQ7LBC6 1761 aa17.18■□□□□ 0.34
ATRX-208ENST00000622960 ARHGAP27Q6ZUM4 889 aa17.18■□□□□ 0.34
ATRX-208ENST00000622960 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
ATRX-208ENST00000622960 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
ATRX-208ENST00000622960 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
ATRX-208ENST00000622960 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
ATRX-208ENST00000622960 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
ATRX-208ENST00000622960 BRCA1P38398 1863 aaKnown RBP17.18■□□□□ 0.34
ATRX-208ENST00000622960 BCORQ6W2J9 1755 aa17.17■□□□□ 0.34
ATRX-208ENST00000622960 ARFGEF1Q9Y6D6 1849 aa17.17■□□□□ 0.34
ATRX-208ENST00000622960 RIPK4P57078 832 aa17.17■□□□□ 0.34
ATRX-208ENST00000622960 BCL2L12Q9HB09 334 aa17.17■□□□□ 0.34
ATRX-208ENST00000622960 UTRNP46939 3433 aa17.17■□□□□ 0.34
ATRX-208ENST00000622960 ST5P78524 1137 aa17.16■□□□□ 0.34
ATRX-208ENST00000622960 TBC1D9BQ66K14 1250 aa17.16■□□□□ 0.34
ATRX-208ENST00000622960 MIS18AQ9NYP9 233 aa17.16■□□□□ 0.34
ATRX-208ENST00000622960 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
ATRX-208ENST00000622960 H0YIN7 160 aa17.15■□□□□ 0.34
ATRX-208ENST00000622960 CHRNA5P30532 468 aa17.15■□□□□ 0.34
ATRX-208ENST00000622960 PDE6BP35913 854 aa17.15■□□□□ 0.34
ATRX-208ENST00000622960 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
ATRX-208ENST00000622960 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
ATRX-208ENST00000622960 ADCY9O60503 1353 aa17.15■□□□□ 0.34
ATRX-208ENST00000622960 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
ATRX-208ENST00000622960 CAMTA2O94983 1202 aa17.14■□□□□ 0.33
ATRX-208ENST00000622960 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
ATRX-208ENST00000622960 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
ATRX-208ENST00000622960 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
ATRX-208ENST00000622960 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
ATRX-208ENST00000622960 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
ATRX-208ENST00000622960 PRKRIP1Q9H875 184 aaPredicted RBP17.14■□□□□ 0.33
ATRX-208ENST00000622960 DLEC1Q9Y238 1755 aa17.13■□□□□ 0.33
ATRX-208ENST00000622960 KCNA3P22001 575 aa17.13■□□□□ 0.33
ATRX-208ENST00000622960 TMPOP42166 694 aaKnown RBP17.13■□□□□ 0.33
ATRX-208ENST00000622960 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
ATRX-208ENST00000622960 GOLGB1Q14789 3259 aaKnown RBP17.12■□□□□ 0.33
ATRX-208ENST00000622960 RGL2O15211 777 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 KIF6Q6ZMV9 814 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
ATRX-208ENST00000622960 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 TTLL6Q8N841 843 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 BRIP1Q9BX63 1249 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 BABAM1Q9NWV8 329 aa17.12■□□□□ 0.33
ATRX-208ENST00000622960 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
ATRX-208ENST00000622960 PRR5LQ6MZQ0 368 aa17.1■□□□□ 0.33
ATRX-208ENST00000622960 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.331e-11■■■■□ 24.3
ATRX-208ENST00000622960 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms