RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CPLX2Q6PUV4 134 aaKnown RBP11.04□□□□□ -0.64
HDAC9-229ENST00000622668 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-229ENST00000622668 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
HDAC9-229ENST00000622668 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
HDAC9-229ENST00000622668 AGLP35573 1532 aa11.04□□□□□ -0.64
HDAC9-229ENST00000622668 PHKG2P15735 406 aa11.04□□□□□ -0.64
HDAC9-229ENST00000622668 CRACR2BQ8N4Y2 399 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-229ENST00000622668 FAM135BQ49AJ0 1406 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 WDR78Q5VTH9 848 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 EXOC6BQ9Y2D4 811 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 ADGBQ8N7X0 1667 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 IL13P35225 146 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 R3HDM1Q15032 1099 aaKnown RBP11.03□□□□□ -0.64
HDAC9-229ENST00000622668 NLGN1Q8N2Q7 840 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 ZNF408Q9H9D4 720 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.03□□□□□ -0.64
HDAC9-229ENST00000622668 ERVV-2B6SEH9 535 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 SLC5A1P13866 664 aa11.03□□□□□ -0.64
HDAC9-229ENST00000622668 MYO1BO43795 1136 aa11.02□□□□□ -0.64
HDAC9-229ENST00000622668 SLC3A2P08195 630 aaKnown RBP11.02□□□□□ -0.64
HDAC9-229ENST00000622668 HCLS1P14317 486 aaPredicted RBP11.02□□□□□ -0.64
HDAC9-229ENST00000622668 THRAP3Q9Y2W1 955 aaKnown RBP11.02□□□□□ -0.64
HDAC9-229ENST00000622668 AKAP2Q9Y2D5 859 aa11.02□□□□□ -0.65
HDAC9-229ENST00000622668 CDC42BPBQ9Y5S2 1711 aa11.02□□□□□ -0.65
HDAC9-229ENST00000622668 IRS4O14654 1257 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-229ENST00000622668 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-229ENST00000622668 LARGE2Q8N3Y3 721 aa11.02□□□□□ -0.65
HDAC9-229ENST00000622668 ASXL1Q8IXJ9 1541 aa11.02□□□□□ -0.65
HDAC9-229ENST00000622668 POLR3AO14802 1390 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-229ENST00000622668 CPLX1O14810 134 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 USP6P35125 1406 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 MADDQ8WXG6 1647 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 DEFB132Q7Z7B7 95 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 FAM89AQ96GI7 184 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 NACAP1Q9BZK3 213 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 USP5P45974 858 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 RNF20Q5VTR2 975 aa11.01□□□□□ -0.65
HDAC9-229ENST00000622668 LRRFIP2Q9Y608 721 aaKnown RBP11.01□□□□□ -0.65
HDAC9-229ENST00000622668 ZFYVE9O95405 1425 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 SLFN5Q08AF3 891 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 LRRCC1Q9C099 1032 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 HDAC9Q9UKV0 1011 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 SH3TC1Q8TE82 1336 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 CNTROBQ8N137 903 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 HELBQ8NG08 1087 aaPredicted RBP11□□□□□ -0.65
HDAC9-229ENST00000622668 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
HDAC9-229ENST00000622668 C8orf58Q8NAV2 365 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 PLA2R1Q13018 1463 aa11□□□□□ -0.65
HDAC9-229ENST00000622668 TDO2P48775 406 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 RSPH6AQ9H0K4 717 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 VEZTQ9HBM0 779 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 MAP4K4O95819 1239 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-229ENST00000622668 USPL1Q5W0Q7 1092 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 KSR2Q6VAB6 950 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 EYA3Q99504 573 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 INSRP06213 1382 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 ABCA6Q8N139 1617 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 TNS3Q68CZ2 1445 aa10.99□□□□□ -0.65
HDAC9-229ENST00000622668 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-229ENST00000622668 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
HDAC9-229ENST00000622668 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-229ENST00000622668 RBM17Q96I25 401 aaKnown RBP10.99□□□□□ -0.65
HDAC9-229ENST00000622668 NF2P35240 595 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 VPS72Q15906 364 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 DDX21Q9NR30 783 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDAC9-229ENST00000622668 SNRKQ9NRH2 765 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 GCC2Q8IWJ2 1684 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 PLXNC1O60486 1568 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 ECM2O94769 699 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-229ENST00000622668 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-229ENST00000622668 CWF19L2Q2TBE0 894 aaKnown RBP10.98□□□□□ -0.65
HDAC9-229ENST00000622668 CENPQQ7L2Z9 268 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-229ENST00000622668 SPON1Q9HCB6 807 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 TXNRD1Q16881 649 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 CCDC8Q9H0W5 538 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-229ENST00000622668 CEP170BQ9Y4F5 1589 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-229ENST00000622668 ADGRB3O60242 1522 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 KCNQ2O43526 872 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 PARP10Q53GL7 1025 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 C2CD5Q86YS7 1000 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 JAG2Q9Y219 1238 aa10.98□□□□□ -0.65
HDAC9-229ENST00000622668 TET3O43151 1660 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 AIDAQ96BJ3 306 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 USP16Q9Y5T5 823 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 REC8O95072 547 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 FAM184AQ8NB25 1140 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 BEGAINQ9BUH8 593 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 ANKARQ7Z5J8 1434 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 KDM4AO75164 1064 aa10.97□□□□□ -0.65
HDAC9-229ENST00000622668 CRKLP46109 303 aaKnown RBP10.97□□□□□ -0.65
HDAC9-229ENST00000622668 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
HDAC9-229ENST00000622668 DPP8Q6V1X1 898 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-229ENST00000622668 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms