RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
TARDBP-227ENST00000622057 IL17REQ8NFR9 667 aa12.54□□□□□ -0.4
TARDBP-227ENST00000622057 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
TARDBP-227ENST00000622057 STARD3NLO95772 234 aa12.53□□□□□ -0.4
TARDBP-227ENST00000622057 SERPINB2P05120 415 aa12.53□□□□□ -0.4
TARDBP-227ENST00000622057 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
TARDBP-227ENST00000622057 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
TARDBP-227ENST00000622057 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-227ENST00000622057 TOMM70O94826 608 aa12.52□□□□□ -0.41
TARDBP-227ENST00000622057 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
TARDBP-227ENST00000622057 COL15A1P39059 1388 aa12.52□□□□□ -0.41
TARDBP-227ENST00000622057 TJP1Q07157 1748 aa12.51□□□□□ -0.41
TARDBP-227ENST00000622057 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
TARDBP-227ENST00000622057 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
TARDBP-227ENST00000622057 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-227ENST00000622057 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-227ENST00000622057 CFAP53Q96M91 514 aa12.51□□□□□ -0.41
TARDBP-227ENST00000622057 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
TARDBP-227ENST00000622057 A0A087WZG4 1122 aa12.5□□□□□ -0.41
TARDBP-227ENST00000622057 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
TARDBP-227ENST00000622057 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
TARDBP-227ENST00000622057 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
TARDBP-227ENST00000622057 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
TARDBP-227ENST00000622057 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-227ENST00000622057 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
TARDBP-227ENST00000622057 NPC1L1Q9UHC9 1359 aa12.5□□□□□ -0.41
TARDBP-227ENST00000622057 KIAA1551Q9HCM1 1747 aa12.5□□□□□ -0.41
TARDBP-227ENST00000622057 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
TARDBP-227ENST00000622057 MRC1P22897 1456 aa12.49□□□□□ -0.41
TARDBP-227ENST00000622057 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
TARDBP-227ENST00000622057 C2CD5Q86YS7 1000 aa12.49□□□□□ -0.41
TARDBP-227ENST00000622057 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
TARDBP-227ENST00000622057 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
TARDBP-227ENST00000622057 NUDCQ9Y266 331 aa12.49□□□□□ -0.41
TARDBP-227ENST00000622057 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 H0YIN7 160 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 KCNQ3O43525 872 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 A1BGP04217 495 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-227ENST00000622057 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.413e-7■■■□□ 15.3
TARDBP-227ENST00000622057 RASSF7Q02833 373 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 CCDC24Q8N4L8 307 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 TTLL6Q8N841 843 aa12.48□□□□□ -0.41
TARDBP-227ENST00000622057 KDM2BQ8NHM5 1336 aa12.47□□□□□ -0.41
TARDBP-227ENST00000622057 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-227ENST00000622057 APLP1P51693 650 aa12.47□□□□□ -0.41
TARDBP-227ENST00000622057 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
TARDBP-227ENST00000622057 ZNF622Q969S3 477 aaKnown RBP eCLIP12.47□□□□□ -0.413e-23■□□□□ 9.1
TARDBP-227ENST00000622057 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
TARDBP-227ENST00000622057 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-227ENST00000622057 CEP350Q5VT06 3117 aa12.46□□□□□ -0.41
TARDBP-227ENST00000622057 NPHP1O15259 732 aa12.46□□□□□ -0.41
TARDBP-227ENST00000622057 PPP2R1AP30153 589 aa12.46□□□□□ -0.41
TARDBP-227ENST00000622057 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-227ENST00000622057 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
TARDBP-227ENST00000622057 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
TARDBP-227ENST00000622057 MCM10Q7L590 875 aa12.45□□□□□ -0.42
TARDBP-227ENST00000622057 RBM46Q8TBY0 533 aaKnown RBP12.45□□□□□ -0.42
TARDBP-227ENST00000622057 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
TARDBP-227ENST00000622057 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
TARDBP-227ENST00000622057 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
TARDBP-227ENST00000622057 LMNB1P20700 586 aa12.44□□□□□ -0.42
TARDBP-227ENST00000622057 PDE6BP35913 854 aa12.44□□□□□ -0.42
TARDBP-227ENST00000622057 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
TARDBP-227ENST00000622057 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
TARDBP-227ENST00000622057 PRR5LQ6MZQ0 368 aa12.44□□□□□ -0.42
TARDBP-227ENST00000622057 DZIP3Q86Y13 1208 aaKnown RBP12.44□□□□□ -0.42
TARDBP-227ENST00000622057 BRIP1Q9BX63 1249 aa12.44□□□□□ -0.42
TARDBP-227ENST00000622057 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
TARDBP-227ENST00000622057 C21orf2O43822 256 aa12.43□□□□□ -0.42
TARDBP-227ENST00000622057 PRELPP51888 382 aa12.43□□□□□ -0.42
TARDBP-227ENST00000622057 HTRA3P83110 453 aa12.43□□□□□ -0.42
TARDBP-227ENST00000622057 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
TARDBP-227ENST00000622057 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
TARDBP-227ENST00000622057 CAMTA2O94983 1202 aa12.42□□□□□ -0.42
TARDBP-227ENST00000622057 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
TARDBP-227ENST00000622057 FSTL1Q12841 308 aa12.42□□□□□ -0.42
TARDBP-227ENST00000622057 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
TARDBP-227ENST00000622057 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
TARDBP-227ENST00000622057 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
TARDBP-227ENST00000622057 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
TARDBP-227ENST00000622057 NFKBIEO00221 500 aa12.41□□□□□ -0.42
TARDBP-227ENST00000622057 ST5P78524 1137 aa12.41□□□□□ -0.42
TARDBP-227ENST00000622057 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
TARDBP-227ENST00000622057 MIS18AQ9NYP9 233 aa12.41□□□□□ -0.42
TARDBP-227ENST00000622057 NEFMP07197 916 aa12.4□□□□□ -0.42
TARDBP-227ENST00000622057 DPY19L2Q6NUT2 758 aa12.4□□□□□ -0.42
TARDBP-227ENST00000622057 AFDNP55196 1824 aaKnown RBP12.39□□□□□ -0.43
TARDBP-227ENST00000622057 VIRMAQ69YN4 1812 aaKnown RBP12.39□□□□□ -0.43
TARDBP-227ENST00000622057 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
TARDBP-227ENST00000622057 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
TARDBP-227ENST00000622057 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-227ENST00000622057 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-227ENST00000622057 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-227ENST00000622057 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
TARDBP-227ENST00000622057 CNKSR1Q969H4 720 aa12.39□□□□□ -0.43
TARDBP-227ENST00000622057 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
TARDBP-227ENST00000622057 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
TARDBP-227ENST00000622057 NRXN2Q9P2S2 1712 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms