RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 MVPQ14764 893 aaKnown RBP23.69■■□□□ 1.38
SEMA6C-210ENST00000621728 ABCC4O15439 1325 aa23.68■■□□□ 1.38
SEMA6C-210ENST00000621728 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
SEMA6C-210ENST00000621728 SNRPA1P09661 255 aaKnown RBP23.68■■□□□ 1.38
SEMA6C-210ENST00000621728 FLIIQ13045 1269 aa23.68■■□□□ 1.38
SEMA6C-210ENST00000621728 ITPRIPQ8IWB1 547 aa23.68■■□□□ 1.38
SEMA6C-210ENST00000621728 MS4A1P11836 297 aa23.67■■□□□ 1.38
SEMA6C-210ENST00000621728 SEPT12Q8IYM1 358 aa23.67■■□□□ 1.38
SEMA6C-210ENST00000621728 API5Q9BZZ5 524 aaKnown RBP23.67■■□□□ 1.38
SEMA6C-210ENST00000621728 KCNQ2O43526 872 aa23.67■■□□□ 1.38
SEMA6C-210ENST00000621728 F6X3S4 739 aa23.66■■□□□ 1.38
SEMA6C-210ENST00000621728 ONECUT3O60422 494 aaPredicted RBP23.66■■□□□ 1.38
SEMA6C-210ENST00000621728 PIP4K2AP48426 406 aaPredicted RBP23.66■■□□□ 1.38
SEMA6C-210ENST00000621728 CCDC136Q96JN2 1154 aa23.66■■□□□ 1.38
SEMA6C-210ENST00000621728 PTPRCP08575 1304 aa23.66■■□□□ 1.38
SEMA6C-210ENST00000621728 PDIA6Q15084 440 aa23.65■■□□□ 1.38
SEMA6C-210ENST00000621728 FKBP5Q13451 457 aaPredicted RBP23.64■■□□□ 1.37
SEMA6C-210ENST00000621728 RBM42Q9BTD8 480 aaKnown RBP23.64■■□□□ 1.37
SEMA6C-210ENST00000621728 DBF4Q9UBU7 674 aaPredicted RBP23.64■■□□□ 1.37
SEMA6C-210ENST00000621728 PTF1AQ7RTS3 328 aa23.63■■□□□ 1.37
SEMA6C-210ENST00000621728 BRWD3Q6RI45 1802 aa23.63■■□□□ 1.37
SEMA6C-210ENST00000621728 MYL6BP14649 208 aa23.62■■□□□ 1.37
SEMA6C-210ENST00000621728 SLC4A9Q96Q91 983 aa23.62■■□□□ 1.37
SEMA6C-210ENST00000621728 DDX21Q9NR30 783 aaKnown RBP eCLIP23.61■■□□□ 1.37
SEMA6C-210ENST00000621728 SLC4A10Q6U841 1118 aa23.6■■□□□ 1.37
SEMA6C-210ENST00000621728 CHMP4AQ9BY43 222 aa23.6■■□□□ 1.37
SEMA6C-210ENST00000621728 ZNF772Q68DY9 489 aaPredicted RBP23.59■■□□□ 1.37
SEMA6C-210ENST00000621728 DNAJC10Q8IXB1 793 aa23.59■■□□□ 1.37
SEMA6C-210ENST00000621728 DDX19BQ9UMR2 479 aa23.59■■□□□ 1.37
SEMA6C-210ENST00000621728 TJP1Q07157 1748 aa23.58■■□□□ 1.36
SEMA6C-210ENST00000621728 A1BGP04217 495 aa23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 AIMP1Q12904 312 aaKnown RBP23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 INTS3Q68E01 1043 aaKnown RBP23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 SBF2Q86WG5 1849 aa23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 NBPF26B4DH59 902 aa23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 NBPF14Q5TI25 921 aa23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 NBPF10Q6P3W6 841 aaKnown RBP23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 LRP10Q7Z4F1 713 aa23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 NBPF15Q8N660 670 aa23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 HYPKQ9NX55 129 aa23.57■■□□□ 1.36
SEMA6C-210ENST00000621728 NHSQ6T4R5 1651 aa23.56■■□□□ 1.36
SEMA6C-210ENST00000621728 ADCY9O60503 1353 aa23.56■■□□□ 1.36
SEMA6C-210ENST00000621728 RGS17Q9UGC6 210 aaPredicted RBP23.56■■□□□ 1.36
SEMA6C-210ENST00000621728 PCDHB15Q9Y5E8 787 aa23.56■■□□□ 1.36
SEMA6C-210ENST00000621728 BTAF1O14981 1849 aa23.55■■□□□ 1.36
SEMA6C-210ENST00000621728 ZBTB7BO15156 539 aaPredicted RBP23.55■■□□□ 1.36
SEMA6C-210ENST00000621728 PI4KAP2A4QPH2 592 aa23.55■■□□□ 1.36
SEMA6C-210ENST00000621728 RBM6P78332 1123 aaKnown RBP23.55■■□□□ 1.36
SEMA6C-210ENST00000621728 PI4KAP1Q8N8J0 262 aa23.55■■□□□ 1.36
SEMA6C-210ENST00000621728 XAGE3Q8WTP9 111 aa23.55■■□□□ 1.36
SEMA6C-210ENST00000621728 ZBTB40Q9NUA8 1239 aa23.55■■□□□ 1.36
SEMA6C-210ENST00000621728 EP400Q96L91 3159 aa23.54■■□□□ 1.36
SEMA6C-210ENST00000621728 N4BP2Q86UW6 1770 aaPredicted RBP23.54■■□□□ 1.36
SEMA6C-210ENST00000621728 VSIG10Q8N0Z9 540 aa23.54■■□□□ 1.36
SEMA6C-210ENST00000621728 C1orf115Q9H7X2 142 aa23.53■■□□□ 1.36
SEMA6C-210ENST00000621728 PALLDQ8WX93 1383 aa23.53■■□□□ 1.36
SEMA6C-210ENST00000621728 COPS6Q7L5N1 327 aa23.53■■□□□ 1.36
SEMA6C-210ENST00000621728 DNAAF4Q8WXU2 420 aa23.51■■□□□ 1.35
SEMA6C-210ENST00000621728 MAP3K2Q9Y2U5 619 aa23.51■■□□□ 1.35
SEMA6C-210ENST00000621728 PXDNLA1KZ92 1463 aa23.5■■□□□ 1.35
SEMA6C-210ENST00000621728 IGHDP01880 384 aa23.5■■□□□ 1.35
SEMA6C-210ENST00000621728 CCT4P50991 539 aaKnown RBP23.5■■□□□ 1.35
SEMA6C-210ENST00000621728 KRT27Q7Z3Y8 459 aa23.5■■□□□ 1.35
SEMA6C-210ENST00000621728 MEIS3Q99687 375 aa23.5■■□□□ 1.35
SEMA6C-210ENST00000621728 LOC102724428A0A0B4J2F2 783 aa23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 CYP19A1P11511 503 aaPredicted RBP23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 SIK1P57059 783 aa23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 POTEAQ6S8J7 498 aa23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 KSR2Q6VAB6 950 aa23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 ERBB4Q15303 1308 aa23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 ITPK1Q13572 414 aa23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 TEX13AQ9BXU3 409 aaPredicted RBP23.49■■□□□ 1.35
SEMA6C-210ENST00000621728 ATP6V1AP38606 617 aa23.48■■□□□ 1.35
SEMA6C-210ENST00000621728 KCNQ4P56696 695 aa23.48■■□□□ 1.35
SEMA6C-210ENST00000621728 KDM2BQ8NHM5 1336 aa23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 STARD3NLO95772 234 aa23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 RXRBP28702 533 aa23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 AAMPQ13685 434 aa23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 TTLL7Q6ZT98 887 aa23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 BEND3Q5T5X7 828 aa23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 SMARCC1Q92922 1105 aaPredicted RBP23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 ZNF330Q9Y3S2 320 aaPredicted RBP23.47■■□□□ 1.35
SEMA6C-210ENST00000621728 DDX58O95786 925 aaKnown RBP23.45■■□□□ 1.35
SEMA6C-210ENST00000621728 RIC3Q7Z5B4 369 aa23.45■■□□□ 1.35
SEMA6C-210ENST00000621728 ZBTB1Q9Y2K1 713 aa23.45■■□□□ 1.35
SEMA6C-210ENST00000621728 SRCIN1Q9C0H9 1055 aa23.45■■□□□ 1.34
SEMA6C-210ENST00000621728 CICQ96RK0 1608 aaPredicted RBP23.44■■□□□ 1.34
SEMA6C-210ENST00000621728 NUP188Q5SRE5 1749 aa23.43■■□□□ 1.34
SEMA6C-210ENST00000621728 CWF19L2Q2TBE0 894 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-210ENST00000621728 ANKRD13DQ6ZTN6 518 aa23.43■■□□□ 1.34
SEMA6C-210ENST00000621728 ATP10DQ9P241 1426 aa23.43■■□□□ 1.34
SEMA6C-210ENST00000621728 COL5A3P25940 1745 aaPredicted RBP23.43■■□□□ 1.34
SEMA6C-210ENST00000621728 MYH14Q7Z406 1995 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-210ENST00000621728 SKAP1Q86WV1 359 aa23.43■■□□□ 1.34
SEMA6C-210ENST00000621728 FAM196AQ6ZSG2 479 aa23.41■■□□□ 1.34
SEMA6C-210ENST00000621728 USP44Q9H0E7 712 aa23.41■■□□□ 1.34
SEMA6C-210ENST00000621728 INTS5Q6P9B9 1019 aaKnown RBP23.41■■□□□ 1.34
SEMA6C-210ENST00000621728 MYD88Q99836 296 aa23.41■■□□□ 1.34
SEMA6C-210ENST00000621728 CHMP4BQ9H444 224 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms