RNA–Protein interactions for RNA: ENST00000621128.4

NCAM1-228, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-228ENST00000621128 CCDC47Q96A33 483 aaKnown RBP10.99□□□□□ -0.65
NCAM1-228ENST00000621128 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
NCAM1-228ENST00000621128 BRMS1Q9HCU9 246 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 ATP7BP35670 1465 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 KSR2Q6VAB6 950 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 ANKRD20A12PQ8NF67 263 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 U3KPZ7 1027 aaPredicted RBP10.99□□□□□ -0.65
NCAM1-228ENST00000621128 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
NCAM1-228ENST00000621128 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
NCAM1-228ENST00000621128 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
NCAM1-228ENST00000621128 KIAA0232Q92628 1395 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 BOLA2Q9H3K6 86 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 CDC42BPBQ9Y5S2 1711 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 MAP3K4Q9Y6R4 1608 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 MARCH6O60337 910 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 MPHOSPH8Q99549 860 aa10.99□□□□□ -0.65
NCAM1-228ENST00000621128 BCORL1Q5H9F3 1711 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 A0A087WZG4 1122 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 CHPF2Q9P2E5 772 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 SSFA2P28290 1259 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
NCAM1-228ENST00000621128 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
NCAM1-228ENST00000621128 C19orf44Q9H6X5 657 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 ARHGEF10O15013 1369 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 FOSBP53539 338 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 STK38Q15208 465 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
NCAM1-228ENST00000621128 CDKL5O76039 1030 aa10.97□□□□□ -0.65
NCAM1-228ENST00000621128 SLC3A2P08195 630 aaKnown RBP10.97□□□□□ -0.65
NCAM1-228ENST00000621128 LINS1Q8NG48 757 aa10.97□□□□□ -0.65
NCAM1-228ENST00000621128 CLTCL1P53675 1640 aa10.97□□□□□ -0.65
NCAM1-228ENST00000621128 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
NCAM1-228ENST00000621128 DHX8Q14562 1220 aaKnown RBP10.97□□□□□ -0.65
NCAM1-228ENST00000621128 ESYT1Q9BSJ8 1104 aa10.97□□□□□ -0.65
NCAM1-228ENST00000621128 TPM2P07951 284 aa10.97□□□□□ -0.65
NCAM1-228ENST00000621128 ANKRD13DQ6ZTN6 518 aa10.97□□□□□ -0.65
NCAM1-228ENST00000621128 PLEKHF1Q96S99 279 aa10.97□□□□□ -0.65
NCAM1-228ENST00000621128 CCDC8Q9H0W5 538 aaPredicted RBP10.97□□□□□ -0.65
NCAM1-228ENST00000621128 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
NCAM1-228ENST00000621128 GCP02774 474 aa10.96□□□□□ -0.65
NCAM1-228ENST00000621128 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.65
NCAM1-228ENST00000621128 STK3Q13188 491 aa10.96□□□□□ -0.65
NCAM1-228ENST00000621128 OLFM4Q6UX06 510 aa10.96□□□□□ -0.65
NCAM1-228ENST00000621128 TNMDQ9H2S6 317 aa10.96□□□□□ -0.65
NCAM1-228ENST00000621128 HMG20BQ9P0W2 317 aa10.96□□□□□ -0.65
NCAM1-228ENST00000621128 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.65
NCAM1-228ENST00000621128 SPATA32Q96LK8 384 aa10.96□□□□□ -0.65
NCAM1-228ENST00000621128 MSH6P52701 1360 aa10.96□□□□□ -0.65
NCAM1-228ENST00000621128 TTC41PQ6P2S7 1318 aa10.96□□□□□ -0.66
NCAM1-228ENST00000621128 GRM8O00222 908 aa10.96□□□□□ -0.66
NCAM1-228ENST00000621128 IFIT1P09914 478 aaKnown RBP10.96□□□□□ -0.66
NCAM1-228ENST00000621128 KRT24Q2M2I5 525 aa10.96□□□□□ -0.66
NCAM1-228ENST00000621128 TRIM22Q8IYM9 498 aa10.96□□□□□ -0.66
NCAM1-228ENST00000621128 TRIM5Q9C035 493 aa10.96□□□□□ -0.66
NCAM1-228ENST00000621128 SCAND2PQ9GZW5 306 aaPredicted RBP10.96□□□□□ -0.66
NCAM1-228ENST00000621128 KLHL40Q2TBA0 621 aa10.96□□□□□ -0.66
NCAM1-228ENST00000621128 LAMC1P11047 1609 aa10.95□□□□□ -0.66
NCAM1-228ENST00000621128 CCDC83Q8IWF9 413 aa10.95□□□□□ -0.66
NCAM1-228ENST00000621128 CWC25Q9NXE8 425 aaPredicted RBP10.95□□□□□ -0.66
NCAM1-228ENST00000621128 SPHKAPQ2M3C7 1700 aa10.95□□□□□ -0.66
NCAM1-228ENST00000621128 ESPNB1AK53 854 aa10.95□□□□□ -0.66
NCAM1-228ENST00000621128 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
NCAM1-228ENST00000621128 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
NCAM1-228ENST00000621128 IFIT5Q13325 482 aaKnown RBP10.95□□□□□ -0.66
NCAM1-228ENST00000621128 METTL24Q5JXM2 366 aa10.95□□□□□ -0.66
NCAM1-228ENST00000621128 NUP62CLQ9H1M0 184 aa10.95□□□□□ -0.66
NCAM1-228ENST00000621128 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
NCAM1-228ENST00000621128 FAM177BA6PVY3 158 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 SEC24BO95487 1268 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 HMGN5P82970 282 aaKnown RBP10.94□□□□□ -0.66
NCAM1-228ENST00000621128 CREBRFQ8IUR6 639 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 ABCC4O15439 1325 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 PLEKHG1Q9ULL1 1385 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 ABCA9Q8IUA7 1624 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 ANXA1P04083 346 aa10.94□□□□□ -0.66
NCAM1-228ENST00000621128 IGHMBP2P38935 993 aaKnown RBP10.94□□□□□ -0.66
NCAM1-228ENST00000621128 MEX3CQ5U5Q3 659 aaKnown RBP10.94□□□□□ -0.66
NCAM1-228ENST00000621128 CCDC183Q5T5S1 534 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 UBE3BQ7Z3V4 1068 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 C16orf71Q8IYS4 520 aaPredicted RBP10.93□□□□□ -0.66
NCAM1-228ENST00000621128 TMX3Q96JJ7 454 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 MADDQ8WXG6 1647 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 ME1P48163 572 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 XAGE3Q8WTP9 111 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 ZNF652Q9Y2D9 606 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 RNMTO43148 476 aaKnown RBP10.93□□□□□ -0.66
NCAM1-228ENST00000621128 MTERF4Q7Z6M4 381 aaKnown RBP10.93□□□□□ -0.66
NCAM1-228ENST00000621128 AOX1Q06278 1338 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 CCDC69A6NI79 296 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
NCAM1-228ENST00000621128 WASF1Q92558 559 aa10.93□□□□□ -0.66
NCAM1-228ENST00000621128 COPS6Q7L5N1 327 aa10.92□□□□□ -0.66
NCAM1-228ENST00000621128 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
NCAM1-228ENST00000621128 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
NCAM1-228ENST00000621128 LTKP29376 864 aa10.92□□□□□ -0.66
NCAM1-228ENST00000621128 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
NCAM1-228ENST00000621128 TSHZ3Q63HK5 1081 aa10.92□□□□□ -0.66
NCAM1-228ENST00000621128 ZCRB1Q8TBF4 217 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms