RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 UVSSAQ2YD98 709 aa8.32□□□□□ -1.08
COLCA1-205ENST00000620864 FKBP15Q5T1M5 1219 aa8.32□□□□□ -1.08
COLCA1-205ENST00000620864 SPATA32Q96LK8 384 aa8.32□□□□□ -1.08
COLCA1-205ENST00000620864 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.32□□□□□ -1.08
COLCA1-205ENST00000620864 PHAXQ9H814 394 aaKnown RBP8.32□□□□□ -1.08
COLCA1-205ENST00000620864 ANAPC15P60006 121 aa8.32□□□□□ -1.08
COLCA1-205ENST00000620864 CCDC50Q8IVM0 306 aa8.32□□□□□ -1.08
COLCA1-205ENST00000620864 ZNF408Q9H9D4 720 aa8.32□□□□□ -1.08
COLCA1-205ENST00000620864 KIF20AO95235 890 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
COLCA1-205ENST00000620864 NEUROD6Q96NK8 337 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 RRP7AQ9Y3A4 280 aaKnown RBP8.31□□□□□ -1.08
COLCA1-205ENST00000620864 FSD2A1L4K1 749 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 PYM1Q9BRP8 204 aaKnown RBP8.31□□□□□ -1.08
COLCA1-205ENST00000620864 TANGO6Q9C0B7 1094 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 TEX14Q8IWB6 1497 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 KIF5BP33176 963 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 CBX1P83916 185 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 IFI16Q16666 785 aaKnown RBP8.31□□□□□ -1.08
COLCA1-205ENST00000620864 EAPPQ56P03 285 aaPredicted RBP8.31□□□□□ -1.08
COLCA1-205ENST00000620864 SSFA2P28290 1259 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 ZSCAN25Q6NSZ9 544 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 RUSC2Q8N2Y8 1516 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 NEBLO76041 1014 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 MSL1Q68DK7 614 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 RIC3Q7Z5B4 369 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
COLCA1-205ENST00000620864 OPA1O60313 960 aa8.31□□□□□ -1.08
COLCA1-205ENST00000620864 SCAND2PQ9GZW5 306 aaPredicted RBP8.31□□□□□ -1.08
COLCA1-205ENST00000620864 KIF22Q14807 665 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 SLC4A8Q2Y0W8 1093 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 TTC31Q49AM3 519 aaPredicted RBP8.3□□□□□ -1.08
COLCA1-205ENST00000620864 DIAPH1O60610 1272 aaKnown RBP8.3□□□□□ -1.08
COLCA1-205ENST00000620864 LIG1P18858 919 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 FSD1Q9BTV5 496 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 USP47Q96K76 1375 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 SOCS7O14512 581 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 TACC1O75410 805 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 SARNPP82979 210 aaKnown RBP8.3□□□□□ -1.08
COLCA1-205ENST00000620864 FKBP5Q13451 457 aaPredicted RBP8.3□□□□□ -1.08
COLCA1-205ENST00000620864 KIF4BQ2VIQ3 1234 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 CCDC150Q8NCX0 1101 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 CCDC110Q8TBZ0 833 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 FERMT1Q9BQL6 677 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 LNPKQ9C0E8 428 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 HSF2BPO75031 334 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 WASHC4Q2M389 1173 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 SH2D4BQ5SQS7 431 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 MIPOL1Q8TD10 442 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 FAM114A2Q9NRY5 505 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 GOLIM4O00461 696 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 ZSCAN29Q8IWY8 852 aaPredicted RBP8.3□□□□□ -1.08
COLCA1-205ENST00000620864 CCDC155Q8N6L0 562 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
COLCA1-205ENST00000620864 GSTTP1A0A1W2PQM5 241 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 ZWINTO95229 277 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.08
COLCA1-205ENST00000620864 NACAP1Q9BZK3 213 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 PANK3Q9H999 370 aa8.3□□□□□ -1.08
COLCA1-205ENST00000620864 ECM2O94769 699 aaPredicted RBP8.29□□□□□ -1.08
COLCA1-205ENST00000620864 CFAP100Q494V2 611 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 L3MBTL2Q969R5 705 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 KIF4AO95239 1232 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 PLEKHO1Q53GL0 409 aaPredicted RBP8.29□□□□□ -1.08
COLCA1-205ENST00000620864 FBXO31Q5XUX0 539 aaPredicted RBP8.29□□□□□ -1.08
COLCA1-205ENST00000620864 CNPY4Q8N129 248 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 PLVAPQ9BX97 442 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 CTNNA3Q9UI47 895 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 MYOM3Q5VTT5 1437 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 SPECC1Q5M775 1068 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
COLCA1-205ENST00000620864 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
COLCA1-205ENST00000620864 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 YEATS4O95619 227 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 TSG101Q99816 390 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 BACH2Q9BYV9 841 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 HMOX1P09601 288 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 TSNARE1Q96NA8 513 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 ANAPC4Q9UJX5 808 aa8.29□□□□□ -1.08
COLCA1-205ENST00000620864 FOXO3O43524 673 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 CCDC113Q9H0I3 377 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 SLC52A1Q9NWF4 448 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 DENND4BO75064 1496 aaPredicted RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 TOP1P11387 765 aaKnown RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 LMAN1P49257 510 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 ZPR1O75312 459 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 DPY19L2Q6NUT2 758 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 FAM177A1Q8N128 213 aaPredicted RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 WDR78Q5VTH9 848 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 GBP6Q6ZN66 633 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 ARFGAP3Q9NP61 516 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 STIM2Q9P246 746 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 LUC7L2Q9Y383 392 aaKnown RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 MAP4K4O95819 1239 aaPredicted RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 ARFGAP2Q8N6H7 521 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 GGNBP2Q9H3C7 697 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms