RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
CD40-207ENST00000620709 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
CD40-207ENST00000620709 KIF13BQ9NQT8 1826 aa21.42■■□□□ 1.02
CD40-207ENST00000620709 ATP10DQ9P241 1426 aa21.42■■□□□ 1.02
CD40-207ENST00000620709 SOS1Q07889 1333 aaPredicted RBP21.42■■□□□ 1.02
CD40-207ENST00000620709 ZBTB1Q9Y2K1 713 aa21.41■■□□□ 1.02
CD40-207ENST00000620709 DDR1Q08345 913 aa21.4■■□□□ 1.02
CD40-207ENST00000620709 RSPH6AQ9H0K4 717 aa21.4■■□□□ 1.02
CD40-207ENST00000620709 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.02
CD40-207ENST00000620709 FCHSD2O94868 740 aa21.39■■□□□ 1.02
CD40-207ENST00000620709 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.02
CD40-207ENST00000620709 COL15A1P39059 1388 aa21.39■■□□□ 1.01
CD40-207ENST00000620709 KIAA1551Q9HCM1 1747 aa21.39■■□□□ 1.01
CD40-207ENST00000620709 STARD3NLO95772 234 aa21.39■■□□□ 1.01
CD40-207ENST00000620709 ZNF330Q9Y3S2 320 aaPredicted RBP21.39■■□□□ 1.01
CD40-207ENST00000620709 ZNF790Q6PG37 636 aa21.38■■□□□ 1.01
CD40-207ENST00000620709 ARHGAP27Q6ZUM4 889 aa21.38■■□□□ 1.01
CD40-207ENST00000620709 ZNF496Q96IT1 587 aaPredicted RBP21.38■■□□□ 1.01
CD40-207ENST00000620709 GPBP1L1Q9HC44 474 aaPredicted RBP21.38■■□□□ 1.01
CD40-207ENST00000620709 UBR2Q8IWV8 1755 aa21.37■■□□□ 1.01
CD40-207ENST00000620709 NARFQ9UHQ1 456 aa21.37■■□□□ 1.01
CD40-207ENST00000620709 RTF1Q92541 710 aaKnown RBP21.36■■□□□ 1.01
CD40-207ENST00000620709 BTBD11A6QL63 1104 aa21.35■■□□□ 1.01
CD40-207ENST00000620709 POLRMTO00411 1230 aaKnown RBP21.35■■□□□ 1.01
CD40-207ENST00000620709 TM4SF1P30408 202 aa21.35■■□□□ 1.01
CD40-207ENST00000620709 HEG1Q9ULI3 1381 aa21.35■■□□□ 1.01
CD40-207ENST00000620709 CHRNA5P30532 468 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 FMNL2Q96PY5 1086 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 PIM2Q9P1W9 311 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 SIPA1L3O60292 1781 aaPredicted RBP21.34■■□□□ 1.01
CD40-207ENST00000620709 KCNQ3O43525 872 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 NFIXQ14938 502 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 RALBP1Q15311 655 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 BICDL1Q6ZP65 573 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 MCM10Q7L590 875 aa21.34■■□□□ 1.01
CD40-207ENST00000620709 TEX13AQ9BXU3 409 aaPredicted RBP21.33■■□□□ 1
CD40-207ENST00000620709 A0A087WZG4 1122 aa21.32■■□□□ 1
CD40-207ENST00000620709 ADCY9O60503 1353 aa21.32■■□□□ 1
CD40-207ENST00000620709 KCNA3P22001 575 aa21.32■■□□□ 1
CD40-207ENST00000620709 DALRD3Q5D0E6 543 aaKnown RBP21.32■■□□□ 1
CD40-207ENST00000620709 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
CD40-207ENST00000620709 CEMIPQ8WUJ3 1361 aa21.31■■□□□ 1
CD40-207ENST00000620709 DCTN1Q14203 1278 aa21.31■■□□□ 1
CD40-207ENST00000620709 BCL2L12Q9HB09 334 aa21.31■■□□□ 1
CD40-207ENST00000620709 A1BGP04217 495 aa21.3■■□□□ 1
CD40-207ENST00000620709 EIF5P55010 431 aaKnown RBP21.3■■□□□ 1
CD40-207ENST00000620709 TBC1D2BQ9UPU7 963 aa21.3■■□□□ 1
CD40-207ENST00000620709 SERPINB2P05120 415 aa21.29■■□□□ 1
CD40-207ENST00000620709 NEFMP07197 916 aa21.29■■□□□ 1
CD40-207ENST00000620709 BRCA1P38398 1863 aaKnown RBP21.29■■□□□ 1
CD40-207ENST00000620709 AFDNP55196 1824 aaKnown RBP21.28■■□□□ 1
CD40-207ENST00000620709 PIP4K2AP48426 406 aaPredicted RBP21.27■■□□□ 1
CD40-207ENST00000620709 MYBBP1AQ9BQG0 1328 aaKnown RBP21.26■□□□□ 0.99
CD40-207ENST00000620709 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
CD40-207ENST00000620709 PRAMEF22A3QJZ6 481 aa21.25■□□□□ 0.99
CD40-207ENST00000620709 IL6STP40189 918 aaPredicted RBP21.25■□□□□ 0.99
CD40-207ENST00000620709 TBC1D9BQ66K14 1250 aa21.25■□□□□ 0.99
CD40-207ENST00000620709 ARFGEF1Q9Y6D6 1849 aa21.25■□□□□ 0.99
CD40-207ENST00000620709 C9orf131Q5VYM1 1079 aa21.24■□□□□ 0.99
CD40-207ENST00000620709 USP16Q9Y5T5 823 aa21.24■□□□□ 0.99
CD40-207ENST00000620709 NPHP1O15259 732 aa21.24■□□□□ 0.99
CD40-207ENST00000620709 C2CD5Q86YS7 1000 aa21.24■□□□□ 0.99
CD40-207ENST00000620709 MIS18AQ9NYP9 233 aa21.24■□□□□ 0.99
CD40-207ENST00000620709 HTATSF1O43719 755 aaKnown RBP21.23■□□□□ 0.99
CD40-207ENST00000620709 SNRPA1P09661 255 aaKnown RBP21.23■□□□□ 0.99
CD40-207ENST00000620709 CCDC24Q8N4L8 307 aa21.23■□□□□ 0.99
CD40-207ENST00000620709 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
CD40-207ENST00000620709 H0YIN7 160 aa21.22■□□□□ 0.99
CD40-207ENST00000620709 DZIP3Q86Y13 1208 aaKnown RBP21.22■□□□□ 0.99
CD40-207ENST00000620709 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
CD40-207ENST00000620709 CARMIL3Q8ND23 1372 aa21.21■□□□□ 0.99
CD40-207ENST00000620709 TAF7Q15545 349 aaPredicted RBP21.21■□□□□ 0.99
CD40-207ENST00000620709 RNF181Q9P0P0 153 aa21.21■□□□□ 0.99
CD40-207ENST00000620709 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
CD40-207ENST00000620709 SETDB2Q96T68 719 aa21.2■□□□□ 0.98
CD40-207ENST00000620709 MAPK8IP3Q9UPT6 1336 aa21.2■□□□□ 0.98
CD40-207ENST00000620709 CCDC184Q52MB2 194 aa21.19■□□□□ 0.98
CD40-207ENST00000620709 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
CD40-207ENST00000620709 CAMTA2O94983 1202 aa21.19■□□□□ 0.98
CD40-207ENST00000620709 TTLL6Q8N841 843 aa21.19■□□□□ 0.98
CD40-207ENST00000620709 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
CD40-207ENST00000620709 KIF3CO14782 793 aa21.18■□□□□ 0.98
CD40-207ENST00000620709 RASSF7Q02833 373 aa21.18■□□□□ 0.98
CD40-207ENST00000620709 PNNQ9H307 717 aaKnown RBP21.18■□□□□ 0.98
CD40-207ENST00000620709 NFE2L2Q16236 605 aa21.17■□□□□ 0.98
CD40-207ENST00000620709 PRR5LQ6MZQ0 368 aa21.17■□□□□ 0.98
CD40-207ENST00000620709 THUMPD2Q9BTF0 503 aaKnown RBP21.17■□□□□ 0.98
CD40-207ENST00000620709 ZNF219Q9P2Y4 722 aaPredicted RBP21.17■□□□□ 0.98
CD40-207ENST00000620709 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
CD40-207ENST00000620709 PLEKHF1Q96S99 279 aa21.16■□□□□ 0.98
CD40-207ENST00000620709 NMRK2Q9NPI5 230 aa21.16■□□□□ 0.98
CD40-207ENST00000620709 CEP350Q5VT06 3117 aa21.16■□□□□ 0.98
CD40-207ENST00000620709 CENPBP07199 599 aaPredicted RBP21.15■□□□□ 0.98
CD40-207ENST00000620709 PDE6BP35913 854 aa21.15■□□□□ 0.98
CD40-207ENST00000620709 DLEC1Q9Y238 1755 aa21.15■□□□□ 0.98
CD40-207ENST00000620709 ST5P78524 1137 aa21.14■□□□□ 0.98
CD40-207ENST00000620709 NGEFQ8N5V2 710 aa21.14■□□□□ 0.98
CD40-207ENST00000620709 PNISRQ8TF01 805 aaKnown RBP21.14■□□□□ 0.98
CD40-207ENST00000620709 BRIP1Q9BX63 1249 aa21.14■□□□□ 0.98
CD40-207ENST00000620709 NBPF26B4DH59 902 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms