RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 NEK11Q8NG66 645 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 MBIPQ9NS73 344 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 RIMS2Q9UQ26 1411 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 PDE1AP54750 535 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 HNRNPH2P55795 449 aaKnown RBP11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 TEX35Q5T0J7 233 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 DEPDC5O75140 1603 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 KMT5BQ4FZB7 885 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 PAXBP1Q9Y5B6 917 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 FAM200AQ8TCP9 573 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 ESYT1Q9BSJ8 1104 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 FAM177A1Q8N128 213 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 DNAJC25Q9H1X3 360 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 ZNF165P49910 485 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 TYRO3Q06418 890 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 ARID5BQ14865 1188 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 FMNL2Q96PY5 1086 aa11.6□□□□□ -0.55
TNFAIP3-210ENST00000620204 CTIFO43310 598 aaKnown RBP11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 SKILP12757 684 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 NECAB1Q8N987 351 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 CLTCQ00610 1675 aaKnown RBP11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 F13A1P00488 732 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 LTKP29376 864 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 ERCC6LQ2NKX8 1250 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 ZSCAN25Q6NSZ9 544 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 ERVK-7P63135 1459 aa11.59□□□□□ -0.55
TNFAIP3-210ENST00000620204 ANKRD36BQ8N2N9 1353 aa11.58□□□□□ -0.55
TNFAIP3-210ENST00000620204 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.55
TNFAIP3-210ENST00000620204 GJB2P29033 226 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 CEP85Q6P2H3 762 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 NUTM1Q86Y26 1132 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 TERF2IPQ9NYB0 399 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 SPG7Q9UQ90 795 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 MADDQ8WXG6 1647 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 LARP1BQ659C4 914 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 CASTP20810 708 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 INTS4Q96HW7 963 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 PLEKHF1Q96S99 279 aa11.58□□□□□ -0.56
TNFAIP3-210ENST00000620204 SYNMO15061 1565 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 OS9Q13438 667 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 CWC27Q6UX04 472 aaKnown RBP11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 USP16Q9Y5T5 823 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 STK3Q13188 491 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 BMS1Q14692 1282 aaKnown RBP11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 THEMISQ8N1K5 641 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 CBX8Q9HC52 389 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 MORC2Q9Y6X9 1032 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 USP27XA6NNY8 438 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 LIG1P18858 919 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 MNS1Q8NEH6 495 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
TNFAIP3-210ENST00000620204 KIF13AQ9H1H9 1805 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 A0A087WWV3 80 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 CAPN2P17655 700 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 AK2P54819 239 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 KRT85P78386 507 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 NUTM2GQ5VZR2 741 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 IL16Q14005 1332 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 ARHGAP45Q92619 1136 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 CUL4AQ13619 759 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 ARHGAP29Q52LW3 1261 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 GPATCH11Q8N954 259 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 LRRCC1Q9C099 1032 aa11.56□□□□□ -0.56
TNFAIP3-210ENST00000620204 FCHSD2O94868 740 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 SLU7O95391 586 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 GPS2Q13227 327 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 NFE2L2Q16236 605 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 LMTK2Q8IWU2 1503 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 TMCO3Q6UWJ1 677 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 UBXN4Q92575 508 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 CCDC34Q96HJ3 373 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 SPATA32Q96LK8 384 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 CHMLP26374 656 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 JAKMIP1Q96N16 626 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-210ENST00000620204 ZNF75DP51815 510 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 AMOTL2Q9Y2J4 779 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 ADGRB3O60242 1522 aa11.54□□□□□ -0.56
TNFAIP3-210ENST00000620204 APPP05067 770 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms