RNA–Protein interactions for RNA: ENST00000619645.1

RNF215-208, Transcript of ring finger protein 215, human

BASIC

Gene RNF215, Length 555 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF215-208	ENST00000619645	RGPD5	Q99666	1765 aa		13.6	□□□□□ -0.23
RNF215-208	ENST00000619645	SALL3	Q9BXA9	1300 aa		13.6	□□□□□ -0.23
RNF215-208	ENST00000619645	LARP1	Q6PKG0	1096 aa	Known RBP	13.59	□□□□□ -0.23
RNF215-208	ENST00000619645	ERC1	Q8IUD2	1116 aa		13.59	□□□□□ -0.23
RNF215-208	ENST00000619645	LINS1	Q8NG48	757 aa		13.59	□□□□□ -0.23
RNF215-208	ENST00000619645	KIF1BP	Q96EK5	621 aa		13.59	□□□□□ -0.23
RNF215-208	ENST00000619645	USP26	Q9BXU7	913 aa		13.59	□□□□□ -0.23
RNF215-208	ENST00000619645	SCN11A	Q9UI33	1791 aa		13.58	□□□□□ -0.23
RNF215-208	ENST00000619645	PNMA6E	A0A0J9YXQ4	647 aa		13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	ERC2	O15083	957 aa		13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	SMARCA5	O60264	1052 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	SNRPA1	P09661	255 aa	Known RBP	13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	PPP1R42	Q7Z4L9	355 aa		13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	UTY	O14607	1347 aa		13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	ERBB4	Q15303	1308 aa		13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	ADCY9	O60503	1353 aa		13.58	□□□□□ -0.24
RNF215-208	ENST00000619645	ERVV-2	B6SEH9	535 aa		13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	MX1	P20591	662 aa		13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	DEK	P35659	375 aa	Known RBP	13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	TTC5	Q8N0Z6	440 aa		13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	FMNL2	Q96PY5	1086 aa		13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	EXOC6B	Q9Y2D4	811 aa		13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	MAP3K2	Q9Y2U5	619 aa		13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	WDR17	Q8IZU2	1322 aa		13.57	□□□□□ -0.24
RNF215-208	ENST00000619645	CRYBG1	Q9Y4K1	1723 aa		13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	MRC1	P22897	1456 aa		13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	SURF6	O75683	361 aa	Known RBP	13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	NEXN	Q0ZGT2	675 aa		13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	NKX1-1	Q15270	411 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	NFATC2IP	Q8NCF5	419 aa		13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	KIF2C	Q99661	725 aa		13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	CARD10	Q9BWT7	1032 aa		13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	PRDM11	Q9NQV5	511 aa		13.56	□□□□□ -0.24
RNF215-208	ENST00000619645	XIRP1	Q702N8	1843 aa	Known RBP	13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	KDM4F	A0A1W2PPD8	638 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	SRGAP3	O43295	1099 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	PLEKHG5	O94827	1062 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	CABP4	P57796	275 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	PDIA6	Q15084	440 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	RHPN1	Q8TCX5	695 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	CABLES1	Q8TDN4	633 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	DDX17	Q92841	729 aa	Known RBP	13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	STRC	Q7RTU9	1775 aa		13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	KDM6A	O15550	1401 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF215-208	ENST00000619645	PKD1L3	Q7Z443	1732 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	APBB1	O00213	710 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	CYP27B1	O15528	508 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	PTMS	P20962	102 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	MCC	P23508	829 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	RIC3	Q7Z5B4	369 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	ZCRB1	Q8TBF4	217 aa	Known RBP	13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	TTC41P	Q6P2S7	1318 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	PCDH11X	Q9BZA7	1347 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	PCDH11Y	Q9BZA8	1340 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	USP42	Q9H9J4	1324 aa	Known RBP	13.54	□□□□□ -0.24
RNF215-208	ENST00000619645	MEGF6	O75095	1541 aa		13.54	□□□□□ -0.24
RNF215-208	ENST00000619645		K7ELQ4	463 aa	Predicted RBP	13.53	□□□□□ -0.24
RNF215-208	ENST00000619645	GRM8	O00222	908 aa		13.53	□□□□□ -0.24
RNF215-208	ENST00000619645	ANAPC15	P60006	121 aa		13.53	□□□□□ -0.24
RNF215-208	ENST00000619645	CHRNA2	Q15822	529 aa		13.53	□□□□□ -0.24
RNF215-208	ENST00000619645	METTL22	Q9BUU2	404 aa	Predicted RBP	13.53	□□□□□ -0.24
RNF215-208	ENST00000619645	SLK	Q9H2G2	1235 aa	Predicted RBP	13.53	□□□□□ -0.24
RNF215-208	ENST00000619645	ST18	O60284	1047 aa		13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	MCM2	P49736	904 aa		13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	ANKRD13D	Q6ZTN6	518 aa		13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	TOM1L2	Q6ZVM7	507 aa		13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	CLASRP	Q8N2M8	674 aa	Known RBP	13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	IL17RA	Q96F46	866 aa		13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	GPATCH3	Q96I76	525 aa		13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	COL15A1	P39059	1388 aa		13.52	□□□□□ -0.25
RNF215-208	ENST00000619645	FRAT2	O75474	233 aa	Predicted RBP	13.51	□□□□□ -0.25
RNF215-208	ENST00000619645	IL2RB	P14784	551 aa		13.51	□□□□□ -0.25
RNF215-208	ENST00000619645	GSE1	Q14687	1217 aa		13.51	□□□□□ -0.25
RNF215-208	ENST00000619645	ZNF496	Q96IT1	587 aa	Predicted RBP	13.51	□□□□□ -0.25
RNF215-208	ENST00000619645	GLRX3	O76003	335 aa	Known RBP	13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	ANXA1	P04083	346 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	CHML	P26374	656 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	DDIT3	P35638	169 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	EVA1C	P58658	441 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	SLC39A6	Q13433	755 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	PROSER3	Q2NL68	480 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	CNTROB	Q8N137	903 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	ESYT1	Q9BSJ8	1104 aa		13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	CWC22	Q9HCG8	908 aa	Known RBP	13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	PARP4	Q9UKK3	1724 aa	Known RBP	13.5	□□□□□ -0.25
RNF215-208	ENST00000619645	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.49	□□□□□ -0.25
RNF215-208	ENST00000619645	TRIM6-TRIM34	B2RNG4	842 aa		13.49	□□□□□ -0.25
RNF215-208	ENST00000619645	HSP90AA1	P07900	732 aa	Known RBP	13.49	□□□□□ -0.25
RNF215-208	ENST00000619645	OS9	Q13438	667 aa	Predicted RBP	13.49	□□□□□ -0.25
RNF215-208	ENST00000619645	COPS6	Q7L5N1	327 aa		13.49	□□□□□ -0.25
RNF215-208	ENST00000619645	XAGE3	Q8WTP9	111 aa		13.49	□□□□□ -0.25
RNF215-208	ENST00000619645	NEURL1B	A8MQ27	555 aa		13.48	□□□□□ -0.25
RNF215-208	ENST00000619645	GCKR	Q14397	625 aa		13.48	□□□□□ -0.25
RNF215-208	ENST00000619645	PLBD2	Q8NHP8	589 aa		13.48	□□□□□ -0.25
RNF215-208	ENST00000619645	RUFY2	Q8WXA3	655 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms