RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ARHGEF1Q92888 912 aaKnown RBP6.47□□□□□ -1.37
SNCA-213ENST00000618500 POTECB2RU33 542 aa6.47□□□□□ -1.37
SNCA-213ENST00000618500 FYB1O15117 783 aa6.47□□□□□ -1.37
SNCA-213ENST00000618500 ATP6V1AP38606 617 aa6.47□□□□□ -1.37
SNCA-213ENST00000618500 MPRIPQ6WCQ1 1025 aa6.47□□□□□ -1.37
SNCA-213ENST00000618500 LAMB4A4D0S4 1761 aa6.47□□□□□ -1.37
SNCA-213ENST00000618500 PHF14O94880 888 aa6.47□□□□□ -1.37
SNCA-213ENST00000618500 RASSF10A6NK89 507 aa6.46□□□□□ -1.38
SNCA-213ENST00000618500 DDR1Q08345 913 aa6.46□□□□□ -1.38
SNCA-213ENST00000618500 WBP1LQ9NX94 342 aa6.46□□□□□ -1.38
SNCA-213ENST00000618500 SOS1Q07889 1333 aaPredicted RBP6.46□□□□□ -1.38
SNCA-213ENST00000618500 RIC1Q4ADV7 1423 aa6.46□□□□□ -1.38
SNCA-213ENST00000618500 RBBP6Q7Z6E9 1792 aaKnown RBP6.46□□□□□ -1.38
SNCA-213ENST00000618500 SOGA3Q5TF21 947 aa6.46□□□□□ -1.38
SNCA-213ENST00000618500 SLC4A9Q96Q91 983 aa6.46□□□□□ -1.38
SNCA-213ENST00000618500 FOXN1O15353 648 aa6.45□□□□□ -1.38
SNCA-213ENST00000618500 RFC4P35249 363 aa6.45□□□□□ -1.38
SNCA-213ENST00000618500 LDHDQ86WU2 507 aa6.45□□□□□ -1.38
SNCA-213ENST00000618500 LTV1Q96GA3 475 aaPredicted RBP6.45□□□□□ -1.38
SNCA-213ENST00000618500 HSPA8P11142 646 aaKnown RBP6.45□□□□□ -1.38
SNCA-213ENST00000618500 DDX60Q8IY21 1712 aaKnown RBP6.45□□□□□ -1.38
SNCA-213ENST00000618500 AIDAQ96BJ3 306 aa6.45□□□□□ -1.38
SNCA-213ENST00000618500 ASAP1Q9ULH1 1129 aa6.45□□□□□ -1.38
SNCA-213ENST00000618500 AMOTQ4VCS5 1084 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 CDCA8Q53HL2 280 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 SP7Q8TDD2 431 aaPredicted RBP6.44□□□□□ -1.38
SNCA-213ENST00000618500 CARD11Q9BXL7 1154 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 SNED1Q8TER0 1413 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 TMC1Q8TDI8 760 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 IQCA1LA6NCM1 817 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 NFKBIEO00221 500 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 HTRA3P83110 453 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 VSIG10Q8N0Z9 540 aa6.44□□□□□ -1.38
SNCA-213ENST00000618500 SLX4Q8IY92 1834 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 CEP350Q5VT06 3117 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 MAP2K1Q02750 393 aaPredicted RBP6.43□□□□□ -1.38
SNCA-213ENST00000618500 HSP90AB2PQ58FF8 381 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 STYK1Q6J9G0 422 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 USHBP1Q8N6Y0 703 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 ABHD8Q96I13 439 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 DPY19L2Q6NUT2 758 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 INTS5Q6P9B9 1019 aaKnown RBP6.43□□□□□ -1.38
SNCA-213ENST00000618500 TTLL6Q8N841 843 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 HHIPL1Q96JK4 782 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 NARFQ9UHQ1 456 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 COL15A1P39059 1388 aa6.43□□□□□ -1.38
SNCA-213ENST00000618500 TMEM88BA6NKF7 163 aa6.42□□□□□ -1.38
SNCA-213ENST00000618500 CA12O43570 354 aa6.42□□□□□ -1.38
SNCA-213ENST00000618500 CRKLP46109 303 aaKnown RBP6.42□□□□□ -1.38
SNCA-213ENST00000618500 RRS1Q15050 365 aaKnown RBP6.42□□□□□ -1.38
SNCA-213ENST00000618500 SPINK5Q9NQ38 1064 aaPredicted RBP6.42□□□□□ -1.38
SNCA-213ENST00000618500 RASSF7Q02833 373 aa6.42□□□□□ -1.38
SNCA-213ENST00000618500 MLLT1Q03111 559 aaPredicted RBP6.42□□□□□ -1.38
SNCA-213ENST00000618500 EYA1Q99502 592 aa6.42□□□□□ -1.38
SNCA-213ENST00000618500 A0A087WZG4 1122 aa6.42□□□□□ -1.38
SNCA-213ENST00000618500 FKBP8Q14318 412 aa6.42□□□□□ -1.38
SNCA-213ENST00000618500 LRRC37AA6NMS7 1700 aa6.41□□□□□ -1.38
SNCA-213ENST00000618500 CARMIL3Q8ND23 1372 aa6.41□□□□□ -1.38
SNCA-213ENST00000618500 ITGBL1O95965 494 aaPredicted RBP6.41□□□□□ -1.38
SNCA-213ENST00000618500 PLEKHO1Q53GL0 409 aaPredicted RBP6.41□□□□□ -1.38
SNCA-213ENST00000618500 U3KPZ7 1027 aaPredicted RBP6.41□□□□□ -1.38
SNCA-213ENST00000618500 PDE6BP35913 854 aa6.4□□□□□ -1.38
SNCA-213ENST00000618500 GRIPAP1Q4V328 841 aa6.4□□□□□ -1.38
SNCA-213ENST00000618500 BRIP1Q9BX63 1249 aa6.4□□□□□ -1.38
SNCA-213ENST00000618500 IBTKQ9P2D0 1353 aaPredicted RBP6.4□□□□□ -1.38
SNCA-213ENST00000618500 ANKRD36CQ5JPF3 1778 aa6.4□□□□□ -1.38
SNCA-213ENST00000618500 VEGFBP49765 207 aa6.4□□□□□ -1.39
SNCA-213ENST00000618500 KLRG2A4D1S0 409 aaPredicted RBP6.39□□□□□ -1.39
SNCA-213ENST00000618500 CHRNA5P30532 468 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 PNMA8AQ86V59 439 aaPredicted RBP6.39□□□□□ -1.39
SNCA-213ENST00000618500 TAF1DQ9H5J8 278 aaPredicted RBP6.39□□□□□ -1.39
SNCA-213ENST00000618500 H0YIN7 160 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 CYP19A1P11511 503 aaPredicted RBP6.39□□□□□ -1.39
SNCA-213ENST00000618500 FAM161AQ3B820 660 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 MAP2K2P36507 400 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 ECE1P42892 770 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 EIF4A2Q14240 407 aaKnown RBP6.39□□□□□ -1.39
SNCA-213ENST00000618500 NFIXQ14938 502 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 SMIM5Q71RC9 77 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 C2CD5Q86YS7 1000 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 GGNBP2Q9H3C7 697 aa6.39□□□□□ -1.39
SNCA-213ENST00000618500 WDR33Q9C0J8 1336 aaKnown RBP6.38□□□□□ -1.39
SNCA-213ENST00000618500 ZPR1O75312 459 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 SERPINB2P05120 415 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 CABP4P57796 275 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 CNKSR1Q969H4 720 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 POLKQ9UBT6 870 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 EMILIN1Q9Y6C2 1016 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 C7orf43Q8WVR3 580 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 RBM42Q9BTD8 480 aaKnown RBP6.38□□□□□ -1.39
SNCA-213ENST00000618500 VPS33BQ9H267 617 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 TAOK3Q9H2K8 898 aa6.38□□□□□ -1.39
SNCA-213ENST00000618500 SRP68Q9UHB9 627 aaKnown RBP6.38□□□□□ -1.39
SNCA-213ENST00000618500 LBX1P52954 281 aa6.37□□□□□ -1.39
SNCA-213ENST00000618500 CHRDL2Q6WN34 429 aa6.37□□□□□ -1.39
SNCA-213ENST00000618500 CARD14Q9BXL6 1004 aa6.37□□□□□ -1.39
SNCA-213ENST00000618500 SAGE1Q9NXZ1 904 aa6.37□□□□□ -1.39
SNCA-213ENST00000618500 PSME4Q14997 1843 aa6.37□□□□□ -1.39
SNCA-213ENST00000618500 CDHR2Q9BYE9 1310 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms