RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 A0A0G2JLW4 131 aa29.37■■■□□ 2.29
SYNGR3-206ENST00000618464 N4BP2Q86UW6 1770 aaPredicted RBP29.36■■■□□ 2.29
SYNGR3-206ENST00000618464 BTBD11A6QL63 1104 aa29.36■■■□□ 2.29
SYNGR3-206ENST00000618464 TGFB2P61812 414 aa29.36■■■□□ 2.29
SYNGR3-206ENST00000618464 FKBP8Q14318 412 aa29.36■■■□□ 2.29
SYNGR3-206ENST00000618464 C10orf71Q711Q0 1435 aa29.36■■■□□ 2.29
SYNGR3-206ENST00000618464 DCTN1Q14203 1278 aa29.35■■■□□ 2.29
SYNGR3-206ENST00000618464 ZNF526Q8TF50 670 aaPredicted RBP29.35■■■□□ 2.29
SYNGR3-206ENST00000618464 PARP3Q9Y6F1 533 aa29.35■■■□□ 2.29
SYNGR3-206ENST00000618464 HEG1Q9ULI3 1381 aa29.35■■■□□ 2.29
SYNGR3-206ENST00000618464 KCNQ3O43525 872 aa29.34■■■□□ 2.29
SYNGR3-206ENST00000618464 CANXP27824 592 aaKnown RBP29.34■■■□□ 2.29
SYNGR3-206ENST00000618464 RALBP1Q15311 655 aa29.34■■■□□ 2.29
SYNGR3-206ENST00000618464 GPBP1L1Q9HC44 474 aaPredicted RBP29.34■■■□□ 2.29
SYNGR3-206ENST00000618464 COL15A1P39059 1388 aa29.33■■■□□ 2.29
SYNGR3-206ENST00000618464 ZPR1O75312 459 aa29.32■■■□□ 2.28
SYNGR3-206ENST00000618464 STARD3NLO95772 234 aa29.32■■■□□ 2.28
SYNGR3-206ENST00000618464 NEFMP07197 916 aa29.32■■■□□ 2.28
SYNGR3-206ENST00000618464 USPL1Q5W0Q7 1092 aa29.32■■■□□ 2.28
SYNGR3-206ENST00000618464 FMNL2Q96PY5 1086 aa29.32■■■□□ 2.28
SYNGR3-206ENST00000618464 DPEP1P16444 411 aa29.31■■■□□ 2.28
SYNGR3-206ENST00000618464 BCS1LQ9Y276 419 aa29.31■■■□□ 2.28
SYNGR3-206ENST00000618464 DDR1Q08345 913 aa29.29■■■□□ 2.28
SYNGR3-206ENST00000618464 HTATSF1O43719 755 aaKnown RBP29.28■■■□□ 2.28
SYNGR3-206ENST00000618464 PLEKHF1Q96S99 279 aa29.28■■■□□ 2.28
SYNGR3-206ENST00000618464 TEX13AQ9BXU3 409 aaPredicted RBP29.27■■■□□ 2.28
SYNGR3-206ENST00000618464 NARFQ9UHQ1 456 aa29.27■■■□□ 2.28
SYNGR3-206ENST00000618464 KCNA3P22001 575 aa29.26■■■□□ 2.27
SYNGR3-206ENST00000618464 ZNF330Q9Y3S2 320 aaPredicted RBP29.26■■■□□ 2.27
SYNGR3-206ENST00000618464 MYBBP1AQ9BQG0 1328 aaKnown RBP29.24■■■□□ 2.27
SYNGR3-206ENST00000618464 MAPK8IP3Q9UPT6 1336 aa29.24■■■□□ 2.27
SYNGR3-206ENST00000618464 DLG5Q8TDM6 1919 aa29.24■■■□□ 2.27
SYNGR3-206ENST00000618464 A1BGP04217 495 aa29.23■■■□□ 2.27
SYNGR3-206ENST00000618464 TM4SF1P30408 202 aa29.23■■■□□ 2.27
SYNGR3-206ENST00000618464 EIF5P55010 431 aaKnown RBP29.23■■■□□ 2.27
SYNGR3-206ENST00000618464 NFE2L2Q16236 605 aa29.23■■■□□ 2.27
SYNGR3-206ENST00000618464 ARHGAP27Q6ZUM4 889 aa29.23■■■□□ 2.27
SYNGR3-206ENST00000618464 BRCA1P38398 1863 aaKnown RBP29.23■■■□□ 2.27
SYNGR3-206ENST00000618464 PRAMEF22A3QJZ6 481 aa29.22■■■□□ 2.27
SYNGR3-206ENST00000618464 POLRMTO00411 1230 aaKnown RBP29.22■■■□□ 2.27
SYNGR3-206ENST00000618464 PNNQ9H307 717 aaKnown RBP29.22■■■□□ 2.27
SYNGR3-206ENST00000618464 BCL2L12Q9HB09 334 aa29.22■■■□□ 2.27
SYNGR3-206ENST00000618464 MIS18AQ9NYP9 233 aa29.22■■■□□ 2.27
SYNGR3-206ENST00000618464 NFIXQ14938 502 aa29.21■■■□□ 2.27
SYNGR3-206ENST00000618464 A0A087WZG4 1122 aa29.2■■■□□ 2.26
SYNGR3-206ENST00000618464 TAF7Q15545 349 aaPredicted RBP29.2■■■□□ 2.26
SYNGR3-206ENST00000618464 THUMPD2Q9BTF0 503 aaKnown RBP29.2■■■□□ 2.26
SYNGR3-206ENST00000618464 USP16Q9Y5T5 823 aa29.2■■■□□ 2.26
SYNGR3-206ENST00000618464 PIP4K2AP48426 406 aaPredicted RBP29.19■■■□□ 2.26
SYNGR3-206ENST00000618464 PIM2Q9P1W9 311 aa29.18■■■□□ 2.26
SYNGR3-206ENST00000618464 TBC1D2BQ9UPU7 963 aa29.18■■■□□ 2.26
SYNGR3-206ENST00000618464 KIF3CO14782 793 aa29.17■■■□□ 2.26
SYNGR3-206ENST00000618464 SNRPA1P09661 255 aaKnown RBP29.17■■■□□ 2.26
SYNGR3-206ENST00000618464 CHRNA5P30532 468 aa29.17■■■□□ 2.26
SYNGR3-206ENST00000618464 IL6STP40189 918 aaPredicted RBP29.17■■■□□ 2.26
SYNGR3-206ENST00000618464 BICDL1Q6ZP65 573 aa29.16■■■□□ 2.26
SYNGR3-206ENST00000618464 NPM2Q86SE8 214 aaKnown RBP29.15■■■□□ 2.26
SYNGR3-206ENST00000618464 SCN7AQ01118 1682 aa29.14■■■□□ 2.26
SYNGR3-206ENST00000618464 AFDNP55196 1824 aaKnown RBP29.13■■■□□ 2.25
SYNGR3-206ENST00000618464 ARFGEF1Q9Y6D6 1849 aa29.13■■■□□ 2.25
SYNGR3-206ENST00000618464 SERPINB2P05120 415 aa29.13■■■□□ 2.25
SYNGR3-206ENST00000618464 DALRD3Q5D0E6 543 aaKnown RBP29.13■■■□□ 2.25
SYNGR3-206ENST00000618464 CEP350Q5VT06 3117 aa29.13■■■□□ 2.25
SYNGR3-206ENST00000618464 ZEB1P37275 1124 aaPredicted RBP29.12■■■□□ 2.25
SYNGR3-206ENST00000618464 TBC1D9BQ66K14 1250 aa29.12■■■□□ 2.25
SYNGR3-206ENST00000618464 CCDC146Q8IYE0 955 aa29.11■■■□□ 2.25
SYNGR3-206ENST00000618464 PNISRQ8TF01 805 aaKnown RBP29.11■■■□□ 2.25
SYNGR3-206ENST00000618464 PRKRIP1Q9H875 184 aaPredicted RBP29.11■■■□□ 2.25
SYNGR3-206ENST00000618464 KDM3BQ7LBC6 1761 aa29.11■■■□□ 2.25
SYNGR3-206ENST00000618464 HSPA6P17066 643 aa29.1■■■□□ 2.25
SYNGR3-206ENST00000618464 RIPK4P57078 832 aa29.1■■■□□ 2.25
SYNGR3-206ENST00000618464 DZIP3Q86Y13 1208 aaKnown RBP29.1■■■□□ 2.25
SYNGR3-206ENST00000618464 NRXN2Q9P2S2 1712 aa29.09■■■□□ 2.25
SYNGR3-206ENST00000618464 WDR43Q15061 677 aaKnown RBP eCLIP29.09■■■□□ 2.25
SYNGR3-206ENST00000618464 C9orf131Q5VYM1 1079 aa29.09■■■□□ 2.25
SYNGR3-206ENST00000618464 CAMTA2O94983 1202 aa29.08■■■□□ 2.25
SYNGR3-206ENST00000618464 RRP7AQ9Y3A4 280 aaKnown RBP29.08■■■□□ 2.25
SYNGR3-206ENST00000618464 TMPOP42166 694 aaKnown RBP29.07■■■□□ 2.24
SYNGR3-206ENST00000618464 CARMIL3Q8ND23 1372 aa29.06■■■□□ 2.24
SYNGR3-206ENST00000618464 NBPF26B4DH59 902 aa29.06■■■□□ 2.24
SYNGR3-206ENST00000618464 NBPF10Q6P3W6 841 aaKnown RBP29.06■■■□□ 2.24
SYNGR3-206ENST00000618464 NBPF15Q8N660 670 aa29.06■■■□□ 2.24
SYNGR3-206ENST00000618464 EIF4A1P60842 406 aaKnown RBP29.05■■■□□ 2.24
SYNGR3-206ENST00000618464 NEUROD2Q15784 382 aa29.05■■■□□ 2.24
SYNGR3-206ENST00000618464 NMRK2Q9NPI5 230 aa29.05■■■□□ 2.24
SYNGR3-206ENST00000618464 LAMB4A4D0S4 1761 aa29.05■■■□□ 2.24
SYNGR3-206ENST00000618464 BCORQ6W2J9 1755 aa29.05■■■□□ 2.24
SYNGR3-206ENST00000618464 CCDC24Q8N4L8 307 aa29.03■■■□□ 2.24
SYNGR3-206ENST00000618464 TSPYL4Q9UJ04 414 aa29.03■■■□□ 2.24
SYNGR3-206ENST00000618464 LMOD3Q0VAK6 560 aa29.02■■■□□ 2.24
SYNGR3-206ENST00000618464 SETDB2Q96T68 719 aa29.02■■■□□ 2.24
SYNGR3-206ENST00000618464 ADAMTS8Q9UP79 889 aa29.02■■■□□ 2.24
SYNGR3-206ENST00000618464 RUNDC1Q96C34 613 aa29.01■■■□□ 2.23
SYNGR3-206ENST00000618464 RNF181Q9P0P0 153 aa29.01■■■□□ 2.23
SYNGR3-206ENST00000618464 TOMM70O94826 608 aa29■■■□□ 2.23
SYNGR3-206ENST00000618464 C2CD5Q86YS7 1000 aa29■■■□□ 2.23
SYNGR3-206ENST00000618464 NPHP1O15259 732 aa28.99■■■□□ 2.23
SYNGR3-206ENST00000618464 NGEFQ8N5V2 710 aa28.99■■■□□ 2.23
SYNGR3-206ENST00000618464 PRR5LQ6MZQ0 368 aa28.98■■■□□ 2.23
SYNGR3-206ENST00000618464 ZNF652Q9Y2D9 606 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms