RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 ZNF397Q8NF99 534 aaPredicted RBP18■□□□□ 0.47
SRRT-217ENST00000618411 MRVI1Q9Y6F6 885 aa18■□□□□ 0.47
SRRT-217ENST00000618411 HECW2Q9P2P5 1572 aa18■□□□□ 0.47
SRRT-217ENST00000618411 SLC4A2P04920 1241 aa18■□□□□ 0.47
SRRT-217ENST00000618411 TYRO3Q06418 890 aa18■□□□□ 0.47
SRRT-217ENST00000618411 RUFY3Q7L099 469 aa18■□□□□ 0.47
SRRT-217ENST00000618411 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
SRRT-217ENST00000618411 MTMR6Q9Y217 621 aa18■□□□□ 0.47
SRRT-217ENST00000618411 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
SRRT-217ENST00000618411 FAM53CQ9NYF3 392 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 RAD50Q92878 1312 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 NAA30Q147X3 362 aaPredicted RBP17.99■□□□□ 0.47
SRRT-217ENST00000618411 GGT6Q6P531 493 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 UNC5CLQ8IV45 518 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 DRC7Q8IY82 874 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 NUP62CLQ9H1M0 184 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
SRRT-217ENST00000618411 AATKQ6ZMQ8 1374 aa17.99■□□□□ 0.47
SRRT-217ENST00000618411 KCNJ4P48050 445 aa17.98■□□□□ 0.47
SRRT-217ENST00000618411 PLA2G4DQ86XP0 818 aa17.98■□□□□ 0.47
SRRT-217ENST00000618411 TIGD1Q96MW7 591 aa17.98■□□□□ 0.47
SRRT-217ENST00000618411 ATP7BP35670 1465 aa17.98■□□□□ 0.47
SRRT-217ENST00000618411 CDK11BP21127 795 aaKnown RBP17.98■□□□□ 0.47
SRRT-217ENST00000618411 ZNF75DP51815 510 aa17.98■□□□□ 0.47
SRRT-217ENST00000618411 LUZP1Q86V48 1076 aa17.98■□□□□ 0.47
SRRT-217ENST00000618411 TPD52L1Q16890 204 aaPredicted RBP17.97■□□□□ 0.47
SRRT-217ENST00000618411 IL25Q9H293 177 aa17.97■□□□□ 0.47
SRRT-217ENST00000618411 IRX5P78411 483 aaPredicted RBP17.97■□□□□ 0.47
SRRT-217ENST00000618411 ATP8B2P98198 1209 aa17.97■□□□□ 0.47
SRRT-217ENST00000618411 SLC20A2Q08357 652 aa17.97■□□□□ 0.47
SRRT-217ENST00000618411 CEP135Q66GS9 1140 aa17.97■□□□□ 0.47
SRRT-217ENST00000618411 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
SRRT-217ENST00000618411 TRIM5Q9C035 493 aa17.97■□□□□ 0.47
SRRT-217ENST00000618411 NRBP1Q9UHY1 535 aa17.97■□□□□ 0.47
SRRT-217ENST00000618411 PDIA4P13667 645 aaKnown RBP17.96■□□□□ 0.47
SRRT-217ENST00000618411 CBX8Q9HC52 389 aa17.96■□□□□ 0.47
SRRT-217ENST00000618411 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
SRRT-217ENST00000618411 ELP1O95163 1332 aa17.96■□□□□ 0.47
SRRT-217ENST00000618411 SGSM2O43147 1006 aa17.96■□□□□ 0.47
SRRT-217ENST00000618411 GJB2P29033 226 aa17.96■□□□□ 0.47
SRRT-217ENST00000618411 IPO4Q8TEX9 1081 aaKnown RBP17.96■□□□□ 0.47
SRRT-217ENST00000618411 CCDC171Q6TFL3 1326 aa17.95■□□□□ 0.46
SRRT-217ENST00000618411 ZBTB22O15209 634 aa17.95■□□□□ 0.46
SRRT-217ENST00000618411 GNAI3P08754 354 aa17.95■□□□□ 0.46
SRRT-217ENST00000618411 KMT5BQ4FZB7 885 aa17.95■□□□□ 0.46
SRRT-217ENST00000618411 TDRD7Q8NHU6 1098 aaKnown RBP17.95■□□□□ 0.46
SRRT-217ENST00000618411 SLFNL1Q499Z3 407 aa17.95■□□□□ 0.46
SRRT-217ENST00000618411 ZSCAN31Q96LW9 406 aaPredicted RBP17.95■□□□□ 0.46
SRRT-217ENST00000618411 CACTINQ8WUQ7 758 aaKnown RBP17.94■□□□□ 0.46
SRRT-217ENST00000618411 KRT85P78386 507 aa17.94■□□□□ 0.46
SRRT-217ENST00000618411 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
SRRT-217ENST00000618411 SH2B1Q9NRF2 756 aaPredicted RBP17.94■□□□□ 0.46
SRRT-217ENST00000618411 SIGLEC1Q9BZZ2 1709 aa17.94■□□□□ 0.46
SRRT-217ENST00000618411 F6X3S4 739 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 CDC25BP30305 580 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 RASEFQ8IZ41 740 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 LSG1Q9H089 658 aaKnown RBP17.93■□□□□ 0.46
SRRT-217ENST00000618411 TNMDQ9H2S6 317 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 HYPKQ9NX55 129 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 NEMFO60524 1076 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 RBM43Q6ZSC3 357 aaKnown RBP17.93■□□□□ 0.46
SRRT-217ENST00000618411 TTC6Q86TZ1 520 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 POGZQ7Z3K3 1410 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 G2E3Q7L622 706 aa17.93■□□□□ 0.46
SRRT-217ENST00000618411 LIG1P18858 919 aa17.92■□□□□ 0.46
SRRT-217ENST00000618411 ERO1AQ96HE7 468 aa17.92■□□□□ 0.46
SRRT-217ENST00000618411 DNAJC2Q99543 621 aaKnown RBP17.92■□□□□ 0.46
SRRT-217ENST00000618411 LARP6Q9BRS8 491 aaKnown RBP17.92■□□□□ 0.46
SRRT-217ENST00000618411 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
SRRT-217ENST00000618411 ZNF215Q9UL58 517 aaPredicted RBP17.92■□□□□ 0.46
SRRT-217ENST00000618411 EDC4Q6P2E9 1401 aaKnown RBP17.92■□□□□ 0.46
SRRT-217ENST00000618411 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
SRRT-217ENST00000618411 IDI1Q13907 227 aa17.92■□□□□ 0.46
SRRT-217ENST00000618411 CAMK4Q16566 473 aa17.92■□□□□ 0.46
SRRT-217ENST00000618411 CCDC83Q8IWF9 413 aa17.92■□□□□ 0.46
SRRT-217ENST00000618411 DDX19AQ9NUU7 478 aaKnown RBP17.92■□□□□ 0.46
SRRT-217ENST00000618411 LARGE1O95461 756 aa17.91■□□□□ 0.46
SRRT-217ENST00000618411 CAVIN2O95810 425 aa17.91■□□□□ 0.46
SRRT-217ENST00000618411 VPS53Q5VIR6 699 aa17.91■□□□□ 0.46
SRRT-217ENST00000618411 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
SRRT-217ENST00000618411 VPS37CA5D8V6 355 aaPredicted RBP17.91■□□□□ 0.46
SRRT-217ENST00000618411 NYAP1Q6ZVC0 841 aa17.91■□□□□ 0.46
SRRT-217ENST00000618411 ZNF592Q92610 1267 aa17.91■□□□□ 0.46
SRRT-217ENST00000618411 TULP2O00295 520 aa17.9■□□□□ 0.46
SRRT-217ENST00000618411 PTPN14Q15678 1187 aa17.9■□□□□ 0.46
SRRT-217ENST00000618411 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
SRRT-217ENST00000618411 RNF20Q5VTR2 975 aa17.9■□□□□ 0.46
SRRT-217ENST00000618411 MCM10Q7L590 875 aa17.9■□□□□ 0.46
SRRT-217ENST00000618411 DACT1Q9NYF0 836 aa17.9■□□□□ 0.46
SRRT-217ENST00000618411 ZNF165P49910 485 aa17.89■□□□□ 0.46
SRRT-217ENST00000618411 FBXO38Q6PIJ6 1188 aa17.89■□□□□ 0.46
SRRT-217ENST00000618411 LRRC8AQ8IWT6 810 aa17.89■□□□□ 0.46
SRRT-217ENST00000618411 CKAP2LQ8IYA6 745 aa17.89■□□□□ 0.46
SRRT-217ENST00000618411 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.46
SRRT-217ENST00000618411 VGLL3A8MV65 326 aa17.89■□□□□ 0.45
SRRT-217ENST00000618411 NME9Q86XW9 330 aa17.89■□□□□ 0.45
SRRT-217ENST00000618411 TM6SF1Q9BZW5 370 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms