RNA–Protein interactions for RNA: ENST00000617791.1

MALAT1-211, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 5 BASIC

Gene MALAT1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-211ENST00000617791 VSIG10Q8N0Z9 540 aa20.7■□□□□ 0.9
MALAT1-211ENST00000617791 GNAT3A8MTJ3 354 aa20.69■□□□□ 0.9
MALAT1-211ENST00000617791 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
MALAT1-211ENST00000617791 TM4SF1P30408 202 aa20.69■□□□□ 0.9
MALAT1-211ENST00000617791 CHRNA5P30532 468 aa20.69■□□□□ 0.9
MALAT1-211ENST00000617791 CFAP53Q96M91 514 aa20.69■□□□□ 0.9
MALAT1-211ENST00000617791 NARFQ9UHQ1 456 aa20.69■□□□□ 0.9
MALAT1-211ENST00000617791 ADAMTS7Q9UKP4 1686 aa20.69■□□□□ 0.9
MALAT1-211ENST00000617791 CEP350Q5VT06 3117 aa20.68■□□□□ 0.9
MALAT1-211ENST00000617791 STARD3NLO95772 234 aa20.68■□□□□ 0.9
MALAT1-211ENST00000617791 IL17REQ8NFR9 667 aa20.68■□□□□ 0.9
MALAT1-211ENST00000617791 VIRMAQ69YN4 1812 aaKnown RBP20.67■□□□□ 0.9
MALAT1-211ENST00000617791 NFIXQ14938 502 aa20.67■□□□□ 0.9
MALAT1-211ENST00000617791 KIF3CO14782 793 aa20.65■□□□□ 0.9
MALAT1-211ENST00000617791 PRKAR2BP31323 418 aa20.65■□□□□ 0.9
MALAT1-211ENST00000617791 C9orf131Q5VYM1 1079 aa20.65■□□□□ 0.9
MALAT1-211ENST00000617791 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
MALAT1-211ENST00000617791 ZNF496Q96IT1 587 aaPredicted RBP20.65■□□□□ 0.9
MALAT1-211ENST00000617791 HSPA6P17066 643 aa20.64■□□□□ 0.89
MALAT1-211ENST00000617791 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.89
MALAT1-211ENST00000617791 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
MALAT1-211ENST00000617791 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.89
MALAT1-211ENST00000617791 BICDL1Q6ZP65 573 aa20.63■□□□□ 0.89
MALAT1-211ENST00000617791 PHACTR3Q96KR7 559 aa20.63■□□□□ 0.89
MALAT1-211ENST00000617791 NUDCQ9Y266 331 aa20.63■□□□□ 0.89
MALAT1-211ENST00000617791 UBR2Q8IWV8 1755 aa20.63■□□□□ 0.89
MALAT1-211ENST00000617791 HEG1Q9ULI3 1381 aa20.62■□□□□ 0.89
MALAT1-211ENST00000617791 A0A087WZG4 1122 aa20.62■□□□□ 0.89
MALAT1-211ENST00000617791 SERPINB2P05120 415 aa20.62■□□□□ 0.89
MALAT1-211ENST00000617791 RSPH6AQ9H0K4 717 aa20.62■□□□□ 0.89
MALAT1-211ENST00000617791 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
MALAT1-211ENST00000617791 EIF5P55010 431 aaKnown RBP20.61■□□□□ 0.89
MALAT1-211ENST00000617791 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
MALAT1-211ENST00000617791 MAPK8IP2Q13387 824 aaPredicted RBP20.61■□□□□ 0.89
MALAT1-211ENST00000617791 FMNL2Q96PY5 1086 aa20.61■□□□□ 0.89
MALAT1-211ENST00000617791 TEX13AQ9BXU3 409 aaPredicted RBP20.61■□□□□ 0.89
MALAT1-211ENST00000617791 ARFGEF1Q9Y6D6 1849 aa20.6■□□□□ 0.89
MALAT1-211ENST00000617791 BTBD11A6QL63 1104 aa20.6■□□□□ 0.89
MALAT1-211ENST00000617791 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
MALAT1-211ENST00000617791 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
MALAT1-211ENST00000617791 RNF181Q9P0P0 153 aa20.6■□□□□ 0.89
MALAT1-211ENST00000617791 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
MALAT1-211ENST00000617791 CEMIPQ8WUJ3 1361 aa20.59■□□□□ 0.89
MALAT1-211ENST00000617791 KCNQ3O43525 872 aa20.58■□□□□ 0.89
MALAT1-211ENST00000617791 C2CD5Q86YS7 1000 aa20.58■□□□□ 0.89
MALAT1-211ENST00000617791 RTF1Q92541 710 aaKnown RBP20.58■□□□□ 0.89
MALAT1-211ENST00000617791 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.89
MALAT1-211ENST00000617791 TBC1D9BQ66K14 1250 aa20.57■□□□□ 0.88
MALAT1-211ENST00000617791 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
MALAT1-211ENST00000617791 H0YIN7 160 aa20.56■□□□□ 0.88
MALAT1-211ENST00000617791 TOMM70O94826 608 aa20.56■□□□□ 0.88
MALAT1-211ENST00000617791 A1BGP04217 495 aa20.56■□□□□ 0.88
MALAT1-211ENST00000617791 IL6STP40189 918 aaPredicted RBP20.56■□□□□ 0.88
MALAT1-211ENST00000617791 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
MALAT1-211ENST00000617791 CARMIL3Q8ND23 1372 aa20.56■□□□□ 0.88
MALAT1-211ENST00000617791 RASSF7Q02833 373 aa20.55■□□□□ 0.88
MALAT1-211ENST00000617791 MCM10Q7L590 875 aa20.55■□□□□ 0.88
MALAT1-211ENST00000617791 C16orf71Q8IYS4 520 aaPredicted RBP20.55■□□□□ 0.88
MALAT1-211ENST00000617791 TTLL6Q8N841 843 aa20.55■□□□□ 0.88
MALAT1-211ENST00000617791 NRXN2Q9P2S2 1712 aa20.55■□□□□ 0.88
MALAT1-211ENST00000617791 KDM2BQ8NHM5 1336 aa20.54■□□□□ 0.88
MALAT1-211ENST00000617791 NPHP1O15259 732 aa20.53■□□□□ 0.88
MALAT1-211ENST00000617791 CCDC24Q8N4L8 307 aa20.53■□□□□ 0.88
MALAT1-211ENST00000617791 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
MALAT1-211ENST00000617791 DCTN1Q14203 1278 aa20.51■□□□□ 0.87
MALAT1-211ENST00000617791 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87not detected■■□□□ 13.4
MALAT1-211ENST00000617791 SETDB2Q96T68 719 aa20.51■□□□□ 0.87
MALAT1-211ENST00000617791 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
MALAT1-211ENST00000617791 SCN7AQ01118 1682 aa20.51■□□□□ 0.87
MALAT1-211ENST00000617791 PRAMEF22A3QJZ6 481 aa20.5■□□□□ 0.87
MALAT1-211ENST00000617791 CAMTA2O94983 1202 aa20.5■□□□□ 0.87
MALAT1-211ENST00000617791 PDE6BP35913 854 aa20.5■□□□□ 0.87
MALAT1-211ENST00000617791 APLP1P51693 650 aa20.5■□□□□ 0.87
MALAT1-211ENST00000617791 PRR5LQ6MZQ0 368 aa20.5■□□□□ 0.87
MALAT1-211ENST00000617791 DZIP3Q86Y13 1208 aaKnown RBP20.5■□□□□ 0.87
MALAT1-211ENST00000617791 BRIP1Q9BX63 1249 aa20.5■□□□□ 0.87
MALAT1-211ENST00000617791 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
MALAT1-211ENST00000617791 LMNB1P20700 586 aa20.49■□□□□ 0.87
MALAT1-211ENST00000617791 CNBD1Q8NA66 436 aa20.49■□□□□ 0.87
MALAT1-211ENST00000617791 RBM46Q8TBY0 533 aaKnown RBP20.49■□□□□ 0.87
MALAT1-211ENST00000617791 RRAGCQ9HB90 399 aa20.49■□□□□ 0.87
MALAT1-211ENST00000617791 ZNF219Q9P2Y4 722 aaPredicted RBP20.49■□□□□ 0.87
MALAT1-211ENST00000617791 NEFMP07197 916 aa20.48■□□□□ 0.87
MALAT1-211ENST00000617791 DLEC1Q9Y238 1755 aa20.47■□□□□ 0.87
MALAT1-211ENST00000617791 HTATSF1O43719 755 aaKnown RBP20.47■□□□□ 0.87
MALAT1-211ENST00000617791 PDZRN3Q9UPQ7 1066 aa20.47■□□□□ 0.87
MALAT1-211ENST00000617791 PRELPP51888 382 aa20.46■□□□□ 0.87
MALAT1-211ENST00000617791 ST5P78524 1137 aa20.46■□□□□ 0.87
MALAT1-211ENST00000617791 ZC3H4Q9UPT8 1303 aaKnown RBP20.46■□□□□ 0.87
MALAT1-211ENST00000617791 NFKBIEO00221 500 aa20.45■□□□□ 0.86
MALAT1-211ENST00000617791 TAF7Q15545 349 aaPredicted RBP20.45■□□□□ 0.86
MALAT1-211ENST00000617791 MIS18AQ9NYP9 233 aa20.45■□□□□ 0.86
MALAT1-211ENST00000617791 ZNF652Q9Y2D9 606 aa20.45■□□□□ 0.86
MALAT1-211ENST00000617791 SBF1O95248 1867 aa20.45■□□□□ 0.86
MALAT1-211ENST00000617791 C21orf2O43822 256 aa20.44■□□□□ 0.86
MALAT1-211ENST00000617791 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
MALAT1-211ENST00000617791 FSTL1Q12841 308 aa20.43■□□□□ 0.86
MALAT1-211ENST00000617791 NBPF5PQ86XG9 351 aaPredicted RBP20.43■□□□□ 0.86
MALAT1-211ENST00000617791 GLTPD2A6NH11 291 aa20.42■□□□□ 0.86
MALAT1-211ENST00000617791 CLEC4GQ6UXB4 293 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms