RNA–Protein interactions for RNA: ENST00000617649.4

ACACA-240, Transcript of acetyl-CoA carboxylase alpha, human

TSL 5 BASIC

Gene ACACA, Length 7,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-240	ENST00000617649	NBPF4	Q96M43	638 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	PDRG1	Q9NUG6	133 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	C6orf229	H3BNL8	230 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	TEX35	Q5T0J7	233 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	CCDC12	Q8WUD4	166 aa	Predicted RBP	7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	CDCA7L	Q96GN5	454 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	ZHX3	Q9H4I2	956 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	HDAC9	Q9UKV0	1011 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	POTEJ	P0CG39	1038 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	CTCFL	Q8NI51	663 aa	Predicted RBP	7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	C8orf37	Q96NL8	207 aa		7.78	□□□□□ -1.16
ACACA-240	ENST00000617649	CWC27	Q6UX04	472 aa	Known RBP	7.77	□□□□□ -1.16
ACACA-240	ENST00000617649	C16orf71	Q8IYS4	520 aa	Predicted RBP	7.77	□□□□□ -1.16
ACACA-240	ENST00000617649	STK11IP	Q8N1F8	1099 aa		7.77	□□□□□ -1.16
ACACA-240	ENST00000617649	SETDB2	Q96T68	719 aa		7.77	□□□□□ -1.16
ACACA-240	ENST00000617649	ME1	P48163	572 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	TRAF1	Q13077	416 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	DDB1	Q16531	1140 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	MNS1	Q8NEH6	495 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	SPINK5	Q9NQ38	1064 aa	Predicted RBP	7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	KDM4A	O75164	1064 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	ERCC4	Q92889	916 aa	Predicted RBP	7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	PLEKHH1	Q9ULM0	1364 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	ERLIN2	O94905	339 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	ZFYVE9	O95405	1425 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	ZFYVE16	Q7Z3T8	1539 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	CBFA2T2	O43439	604 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	IL27	Q8NEV9	243 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	IL16	Q14005	1332 aa		7.77	□□□□□ -1.17
ACACA-240	ENST00000617649	MX1	P20591	662 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	PDE4B	Q07343	736 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	ZNF622	Q969S3	477 aa	Known RBP eCLIP	7.76	□□□□□ -1.17	2e-6	■□□□□ 10.2
ACACA-240	ENST00000617649	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CCDC39	Q9UFE4	941 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	TNNT3	P45378	269 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CABP5	Q9NP86	173 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	TSHZ2	Q9NRE2	1034 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	SLFN5	Q08AF3	891 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	TMEM266	Q2M3C6	531 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CCDC178	Q5BJE1	867 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	LARP1B	Q659C4	914 aa	Known RBP	7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	MAP4K4	O95819	1239 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	KIF5B	P33176	963 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	ATP6V1A	P38606	617 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	FEZ1	Q99689	392 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	FANCI	Q9NVI1	1328 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CHD1	O14646	1710 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	C11orf95	C9JLR9	678 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CCDC96	Q2M329	555 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CCDC150	Q8NCX0	1101 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	JAKMIP1	Q96N16	626 aa	Known RBP	7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CEP170	Q5SW79	1584 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	CCDC192	P0DO97	292 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	SCLT1	Q96NL6	688 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	ZMYM3	Q14202	1370 aa		7.76	□□□□□ -1.17
ACACA-240	ENST00000617649	IL2RB	P14784	551 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	STK3	Q13188	491 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	CATIP	Q7Z7H3	387 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	TANGO6	Q9C0B7	1094 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	MINDY4B	A8MYZ0	360 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	PPFIBP1	Q86W92	1011 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	TSPY26P	Q9H489	355 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	UQCRFS1P1	P0C7P4	283 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	NF2	P35240	595 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	ANKRD18A	Q8IVF6	992 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	DEF6	Q9H4E7	631 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	MIS18A	Q9NYP9	233 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	EMILIN1	Q9Y6C2	1016 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	NEO1	Q92859	1461 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649		K7ELQ4	463 aa	Predicted RBP	7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	OGFOD1	Q8N543	542 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	TRIM5	Q9C035	493 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	KDM5A	P29375	1690 aa	Known RBP	7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	PCDH11X	Q9BZA7	1347 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	PCDH11Y	Q9BZA8	1340 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	MAP3K2	Q9Y2U5	619 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	PLXNC1	O60486	1568 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	ARHGEF12	Q9NZN5	1544 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	HSP90B2P	Q58FF3	399 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	TMEM57	Q8N5G2	664 aa		7.75	□□□□□ -1.17
ACACA-240	ENST00000617649	ZNF213	O14771	459 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	FLT4	P35916	1363 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	TCOF1	Q13428	1488 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	TMEM87A	Q8NBN3	555 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	PUS7	Q96PZ0	661 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	RSPH6A	Q9H0K4	717 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	TNMD	Q9H2S6	317 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	KIF20A	O95235	890 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	FGFR1OP	O95684	399 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	CAST	P20810	708 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	FLII	Q13045	1269 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	ZNF804A	Q7Z570	1209 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	PARP3	Q9Y6F1	533 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	SERPINC1	P01008	464 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	ZRSR2	Q15696	482 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	SLC12A7	Q9Y666	1083 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	NPAT	Q14207	1427 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	FIBP	O43427	364 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms