RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 BRPF1P55201 1214 aaPredicted RBP20.76■□□□□ 0.91
SNAP47-213ENST00000617596 PROSER3Q2NL68 480 aa20.76■□□□□ 0.91
SNAP47-213ENST00000617596 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
SNAP47-213ENST00000617596 ATF7IPQ6VMQ6 1270 aa20.76■□□□□ 0.91
SNAP47-213ENST00000617596 EXOC6Q8TAG9 804 aa20.76■□□□□ 0.91
SNAP47-213ENST00000617596 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
SNAP47-213ENST00000617596 C5P01031 1676 aa20.76■□□□□ 0.91
SNAP47-213ENST00000617596 PHAXQ9H814 394 aaKnown RBP20.75■□□□□ 0.91
SNAP47-213ENST00000617596 BRWD3Q6RI45 1802 aa20.74■□□□□ 0.91
SNAP47-213ENST00000617596 UBR2Q8IWV8 1755 aa20.74■□□□□ 0.91
SNAP47-213ENST00000617596 COG6Q9Y2V7 657 aa20.73■□□□□ 0.91
SNAP47-213ENST00000617596 RGS12O14924 1447 aa20.73■□□□□ 0.91
SNAP47-213ENST00000617596 IPO8O15397 1037 aaKnown RBP20.72■□□□□ 0.91
SNAP47-213ENST00000617596 DNAJC10Q8IXB1 793 aa20.72■□□□□ 0.91
SNAP47-213ENST00000617596 FTSJ3Q8IY81 847 aaKnown RBP20.72■□□□□ 0.91
SNAP47-213ENST00000617596 MYL6BP14649 208 aa20.72■□□□□ 0.91
SNAP47-213ENST00000617596 PDIA6Q15084 440 aa20.72■□□□□ 0.91
SNAP47-213ENST00000617596 DZIP1LQ8IYY4 767 aaKnown RBP20.72■□□□□ 0.91
SNAP47-213ENST00000617596 DBF4Q9UBU7 674 aaPredicted RBP20.72■□□□□ 0.91
SNAP47-213ENST00000617596 FLIIQ13045 1269 aa20.71■□□□□ 0.91
SNAP47-213ENST00000617596 PDE3AQ14432 1141 aa20.71■□□□□ 0.91
SNAP47-213ENST00000617596 ERICH6Q7L0X2 663 aa20.71■□□□□ 0.91
SNAP47-213ENST00000617596 A1BGP04217 495 aa20.7■□□□□ 0.91
SNAP47-213ENST00000617596 PALLDQ8WX93 1383 aa20.7■□□□□ 0.9
SNAP47-213ENST00000617596 F6X3S4 739 aa20.7■□□□□ 0.9
SNAP47-213ENST00000617596 KCNQ4P56696 695 aa20.7■□□□□ 0.9
SNAP47-213ENST00000617596 FKBP5Q13451 457 aaPredicted RBP20.69■□□□□ 0.9
SNAP47-213ENST00000617596 FAM196AQ6ZSG2 479 aa20.68■□□□□ 0.9
SNAP47-213ENST00000617596 TMEM57Q8N5G2 664 aa20.68■□□□□ 0.9
SNAP47-213ENST00000617596 ARHGAP45Q92619 1136 aa20.68■□□□□ 0.9
SNAP47-213ENST00000617596 LOC102724428A0A0B4J2F2 783 aa20.68■□□□□ 0.9
SNAP47-213ENST00000617596 TRIM37O94972 964 aa20.68■□□□□ 0.9
SNAP47-213ENST00000617596 SIK1P57059 783 aa20.68■□□□□ 0.9
SNAP47-213ENST00000617596 AIMP1Q12904 312 aaKnown RBP20.68■□□□□ 0.9
SNAP47-213ENST00000617596 DDX21Q9NR30 783 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNAP47-213ENST00000617596 NBPF26B4DH59 902 aa20.67■□□□□ 0.9
SNAP47-213ENST00000617596 ATP6V1AP38606 617 aa20.67■□□□□ 0.9
SNAP47-213ENST00000617596 NBPF14Q5TI25 921 aa20.67■□□□□ 0.9
SNAP47-213ENST00000617596 NBPF10Q6P3W6 841 aaKnown RBP20.67■□□□□ 0.9
SNAP47-213ENST00000617596 VSIG10Q8N0Z9 540 aa20.67■□□□□ 0.9
SNAP47-213ENST00000617596 NBPF15Q8N660 670 aa20.67■□□□□ 0.9
SNAP47-213ENST00000617596 PTPRCP08575 1304 aa20.67■□□□□ 0.9
SNAP47-213ENST00000617596 CHMP4AQ9BY43 222 aa20.66■□□□□ 0.9
SNAP47-213ENST00000617596 API5Q9BZZ5 524 aaKnown RBP20.66■□□□□ 0.9
SNAP47-213ENST00000617596 ITPRIPQ8IWB1 547 aa20.66■□□□□ 0.9
SNAP47-213ENST00000617596 NHSQ6T4R5 1651 aa20.66■□□□□ 0.9
SNAP47-213ENST00000617596 ITPK1Q13572 414 aa20.65■□□□□ 0.9
SNAP47-213ENST00000617596 SLC4A10Q6U841 1118 aa20.65■□□□□ 0.9
SNAP47-213ENST00000617596 SMARCC1Q92922 1105 aaPredicted RBP20.65■□□□□ 0.9
SNAP47-213ENST00000617596 LRP10Q7Z4F1 713 aa20.65■□□□□ 0.9
SNAP47-213ENST00000617596 BCL11BQ9C0K0 894 aaPredicted RBP20.65■□□□□ 0.9
SNAP47-213ENST00000617596 HYPKQ9NX55 129 aa20.65■□□□□ 0.9
SNAP47-213ENST00000617596 ABCC4O15439 1325 aa20.64■□□□□ 0.9
SNAP47-213ENST00000617596 CYP19A1P11511 503 aaPredicted RBP20.64■□□□□ 0.89
SNAP47-213ENST00000617596 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
SNAP47-213ENST00000617596 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
SNAP47-213ENST00000617596 BTAF1O14981 1849 aa20.64■□□□□ 0.89
SNAP47-213ENST00000617596 SBF2Q86WG5 1849 aa20.64■□□□□ 0.89
SNAP47-213ENST00000617596 STARD3NLO95772 234 aa20.63■□□□□ 0.89
SNAP47-213ENST00000617596 MS4A1P11836 297 aa20.63■□□□□ 0.89
SNAP47-213ENST00000617596 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
SNAP47-213ENST00000617596 XAGE3Q8WTP9 111 aa20.63■□□□□ 0.89
SNAP47-213ENST00000617596 PI4KAP2A4QPH2 592 aa20.63■□□□□ 0.89
SNAP47-213ENST00000617596 PI4KAP1Q8N8J0 262 aa20.63■□□□□ 0.89
SNAP47-213ENST00000617596 TEX13AQ9BXU3 409 aaPredicted RBP20.63■□□□□ 0.89
SNAP47-213ENST00000617596 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
SNAP47-213ENST00000617596 ZBTB1Q9Y2K1 713 aa20.61■□□□□ 0.89
SNAP47-213ENST00000617596 B4GALNT3Q6L9W6 998 aa20.6■□□□□ 0.89
SNAP47-213ENST00000617596 TJP1Q07157 1748 aa20.6■□□□□ 0.89
SNAP47-213ENST00000617596 ADCY9O60503 1353 aa20.59■□□□□ 0.89
SNAP47-213ENST00000617596 TTLL7Q6ZT98 887 aa20.59■□□□□ 0.89
SNAP47-213ENST00000617596 MAP3K2Q9Y2U5 619 aa20.59■□□□□ 0.89
SNAP47-213ENST00000617596 PRKCSHP14314 528 aaPredicted RBP20.59■□□□□ 0.89
SNAP47-213ENST00000617596 CRKLP46109 303 aaKnown RBP20.59■□□□□ 0.89
SNAP47-213ENST00000617596 LINC00116Q8NCU8 138 aa20.59■□□□□ 0.89
SNAP47-213ENST00000617596 ERBB4Q15303 1308 aa20.58■□□□□ 0.89
SNAP47-213ENST00000617596 PPP4R2Q9NY27 417 aa20.58■□□□□ 0.88
SNAP47-213ENST00000617596 CCNL1Q9UK58 526 aaPredicted RBP20.58■□□□□ 0.88
SNAP47-213ENST00000617596 INTS3Q68E01 1043 aaKnown RBP20.57■□□□□ 0.88
SNAP47-213ENST00000617596 INTS5Q6P9B9 1019 aaKnown RBP20.57■□□□□ 0.88
SNAP47-213ENST00000617596 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
SNAP47-213ENST00000617596 ARXQ96QS3 562 aa20.57■□□□□ 0.88
SNAP47-213ENST00000617596 CACNA1FO60840 1977 aa20.57■□□□□ 0.88
SNAP47-213ENST00000617596 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
SNAP47-213ENST00000617596 DDX19BQ9UMR2 479 aa20.57■□□□□ 0.88
SNAP47-213ENST00000617596 RIC3Q7Z5B4 369 aa20.56■□□□□ 0.88
SNAP47-213ENST00000617596 ANKRD13DQ6ZTN6 518 aa20.55■□□□□ 0.88
SNAP47-213ENST00000617596 ILDR2Q71H61 639 aa20.55■□□□□ 0.88
SNAP47-213ENST00000617596 ZBTB7BO15156 539 aaPredicted RBP20.55■□□□□ 0.88
SNAP47-213ENST00000617596 DDX58O95786 925 aaKnown RBP20.55■□□□□ 0.88
SNAP47-213ENST00000617596 SMIM5Q71RC9 77 aa20.55■□□□□ 0.88
SNAP47-213ENST00000617596 LRRC4BQ9NT99 713 aa20.55■□□□□ 0.88
SNAP47-213ENST00000617596 CCDC87Q9NVE4 849 aa20.55■□□□□ 0.88
SNAP47-213ENST00000617596 ZBTB3Q9H5J0 574 aa20.54■□□□□ 0.88
SNAP47-213ENST00000617596 C1orf115Q9H7X2 142 aa20.54■□□□□ 0.88
SNAP47-213ENST00000617596 APBA3O96018 575 aa20.53■□□□□ 0.88
SNAP47-213ENST00000617596 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
SNAP47-213ENST00000617596 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
SNAP47-213ENST00000617596 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
SNAP47-213ENST00000617596 MEIS3Q99687 375 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms