RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZPR1O75312 459 aa11.64□□□□□ -0.55
GPC6-202ENST00000617456 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
GPC6-202ENST00000617456 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
GPC6-202ENST00000617456 AEBP1Q8IUX7 1158 aa11.64□□□□□ -0.55
GPC6-202ENST00000617456 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
GPC6-202ENST00000617456 ARFGEF1Q9Y6D6 1849 aa11.64□□□□□ -0.55
GPC6-202ENST00000617456 INTS5Q6P9B9 1019 aaKnown RBP11.63□□□□□ -0.55
GPC6-202ENST00000617456 HSPA5P11021 654 aaKnown RBP11.62□□□□□ -0.55
GPC6-202ENST00000617456 TM4SF1P30408 202 aa11.62□□□□□ -0.55
GPC6-202ENST00000617456 DNAJC10Q8IXB1 793 aa11.62□□□□□ -0.55
GPC6-202ENST00000617456 ZNF831Q5JPB2 1677 aa11.62□□□□□ -0.55
GPC6-202ENST00000617456 SULT6B1Q6IMI4 303 aa11.61□□□□□ -0.55
GPC6-202ENST00000617456 PCNTO95613 3336 aa11.6□□□□□ -0.55
GPC6-202ENST00000617456 HSPA1AP0DMV8 641 aaKnown RBP11.6□□□□□ -0.55
GPC6-202ENST00000617456 HSPA1BP0DMV9 641 aaKnown RBP11.6□□□□□ -0.55
GPC6-202ENST00000617456 LMNB1P20700 586 aa11.6□□□□□ -0.55
GPC6-202ENST00000617456 PRELPP51888 382 aa11.6□□□□□ -0.55
GPC6-202ENST00000617456 NFIXQ14938 502 aa11.6□□□□□ -0.55
GPC6-202ENST00000617456 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
GPC6-202ENST00000617456 GLTPD2A6NH11 291 aa11.59□□□□□ -0.55
GPC6-202ENST00000617456 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
GPC6-202ENST00000617456 SLC39A6Q13433 755 aa11.59□□□□□ -0.55
GPC6-202ENST00000617456 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
GPC6-202ENST00000617456 C2CD5Q86YS7 1000 aa11.59□□□□□ -0.55
GPC6-202ENST00000617456 PANK3Q9H999 370 aa11.59□□□□□ -0.55
GPC6-202ENST00000617456 SBF1O95248 1867 aa11.59□□□□□ -0.55
GPC6-202ENST00000617456 TNRC6CQ9HCJ0 1690 aaKnown RBP11.59□□□□□ -0.55
GPC6-202ENST00000617456 SERPINB2P05120 415 aa11.58□□□□□ -0.56
GPC6-202ENST00000617456 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
GPC6-202ENST00000617456 BICDL1Q6ZP65 573 aa11.58□□□□□ -0.56
GPC6-202ENST00000617456 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
GPC6-202ENST00000617456 LGR6Q9HBX8 967 aa11.58□□□□□ -0.56
GPC6-202ENST00000617456 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
GPC6-202ENST00000617456 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
GPC6-202ENST00000617456 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
GPC6-202ENST00000617456 TJP1Q07157 1748 aa11.57□□□□□ -0.56
GPC6-202ENST00000617456 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
GPC6-202ENST00000617456 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
GPC6-202ENST00000617456 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
GPC6-202ENST00000617456 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
GPC6-202ENST00000617456 KNSTRNQ9Y448 316 aa11.57□□□□□ -0.56
GPC6-202ENST00000617456 COL15A1P39059 1388 aa11.56□□□□□ -0.56
GPC6-202ENST00000617456 H0YIN7 160 aa11.56□□□□□ -0.56
GPC6-202ENST00000617456 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
GPC6-202ENST00000617456 IL13P35225 146 aa11.56□□□□□ -0.56
GPC6-202ENST00000617456 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
GPC6-202ENST00000617456 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
GPC6-202ENST00000617456 NFKBIEO00221 500 aa11.55□□□□□ -0.56
GPC6-202ENST00000617456 RNMTO43148 476 aaKnown RBP11.55□□□□□ -0.56
GPC6-202ENST00000617456 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
GPC6-202ENST00000617456 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
GPC6-202ENST00000617456 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
GPC6-202ENST00000617456 POTECB2RU33 542 aa11.54□□□□□ -0.56
GPC6-202ENST00000617456 HMOX1P09601 288 aa11.54□□□□□ -0.56
GPC6-202ENST00000617456 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
GPC6-202ENST00000617456 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
GPC6-202ENST00000617456 MKRN1Q9UHC7 482 aaKnown RBP11.54□□□□□ -0.56
GPC6-202ENST00000617456 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
GPC6-202ENST00000617456 C21orf2O43822 256 aa11.53□□□□□ -0.56
GPC6-202ENST00000617456 MAPK8IP2Q13387 824 aaPredicted RBP11.53□□□□□ -0.56
GPC6-202ENST00000617456 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
GPC6-202ENST00000617456 PODXL2Q9NZ53 605 aa11.53□□□□□ -0.56
GPC6-202ENST00000617456 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
GPC6-202ENST00000617456 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
GPC6-202ENST00000617456 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
GPC6-202ENST00000617456 TBC1D9BQ66K14 1250 aa11.52□□□□□ -0.57
GPC6-202ENST00000617456 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.57
GPC6-202ENST00000617456 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
GPC6-202ENST00000617456 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
GPC6-202ENST00000617456 KIF7Q2M1P5 1343 aa11.51□□□□□ -0.57
GPC6-202ENST00000617456 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
GPC6-202ENST00000617456 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 A0A087WZG4 1122 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 NPHP1O15259 732 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 DDNO94850 711 aaPredicted RBP11.5□□□□□ -0.57
GPC6-202ENST00000617456 STARD3NLO95772 234 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 POTEJP0CG39 1038 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 PDE6BP35913 854 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 MTHFSDQ2M296 383 aaKnown RBP11.5□□□□□ -0.57
GPC6-202ENST00000617456 TTC5Q8N0Z6 440 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 TBC1D2BQ9UPU7 963 aa11.5□□□□□ -0.57
GPC6-202ENST00000617456 EIF5P55010 431 aaKnown RBP11.49□□□□□ -0.57
GPC6-202ENST00000617456 PRR5LQ6MZQ0 368 aa11.49□□□□□ -0.57
GPC6-202ENST00000617456 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
GPC6-202ENST00000617456 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
GPC6-202ENST00000617456 MRC1P22897 1456 aa11.49□□□□□ -0.57
GPC6-202ENST00000617456 DLEC1Q9Y238 1755 aa11.49□□□□□ -0.57
GPC6-202ENST00000617456 RNF216Q9NWF9 866 aaPredicted RBP11.48□□□□□ -0.57
GPC6-202ENST00000617456 FOXN1O15353 648 aa11.47□□□□□ -0.57
GPC6-202ENST00000617456 NPM2Q86SE8 214 aaKnown RBP11.47□□□□□ -0.57
GPC6-202ENST00000617456 CNBD1Q8NA66 436 aa11.47□□□□□ -0.57
GPC6-202ENST00000617456 CNKSR1Q969H4 720 aa11.47□□□□□ -0.57
GPC6-202ENST00000617456 ZNF496Q96IT1 587 aaPredicted RBP11.47□□□□□ -0.57
GPC6-202ENST00000617456 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
GPC6-202ENST00000617456 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
GPC6-202ENST00000617456 A1BGP04217 495 aa11.46□□□□□ -0.57
GPC6-202ENST00000617456 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms