RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SGSM2O43147 1006 aa18.7■□□□□ 0.58
GPN1-212ENST00000616939 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
GPN1-212ENST00000616939 HCLS1P14317 486 aaPredicted RBP18.7■□□□□ 0.58
GPN1-212ENST00000616939 SLC4A10Q6U841 1118 aa18.7■□□□□ 0.58
GPN1-212ENST00000616939 TSPYL4Q9UJ04 414 aa18.7■□□□□ 0.58
GPN1-212ENST00000616939 PNMA6EA0A0J9YXQ4 647 aa18.7■□□□□ 0.58
GPN1-212ENST00000616939 PDIA4P13667 645 aaKnown RBP18.7■□□□□ 0.58
GPN1-212ENST00000616939 ZSCAN20P17040 1043 aaPredicted RBP18.7■□□□□ 0.58
GPN1-212ENST00000616939 TSHZ3Q63HK5 1081 aa18.7■□□□□ 0.58
GPN1-212ENST00000616939 NOL8Q76FK4 1167 aaKnown RBP18.7■□□□□ 0.58
GPN1-212ENST00000616939 TTC12Q9H892 705 aaPredicted RBP18.7■□□□□ 0.58
GPN1-212ENST00000616939 LIMCH1Q9UPQ0 1083 aa18.7■□□□□ 0.58
GPN1-212ENST00000616939 GOLGA6L6A8MZA4 724 aa18.69■□□□□ 0.58
GPN1-212ENST00000616939 SSH3Q8TE77 659 aa18.69■□□□□ 0.58
GPN1-212ENST00000616939 SENP3Q9H4L4 574 aaPredicted RBP18.69■□□□□ 0.58
GPN1-212ENST00000616939 SNX14Q9Y5W7 946 aa18.69■□□□□ 0.58
GPN1-212ENST00000616939 UNC5CLQ8IV45 518 aa18.68■□□□□ 0.58
GPN1-212ENST00000616939 LSG1Q9H089 658 aaKnown RBP18.68■□□□□ 0.58
GPN1-212ENST00000616939 METP08581 1390 aa18.68■□□□□ 0.58
GPN1-212ENST00000616939 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
GPN1-212ENST00000616939 SYT1P21579 422 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 FLIIQ13045 1269 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 SYCP1Q15431 976 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 CCDC30Q5VVM6 783 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 ANKRD7Q92527 254 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 ZNF830Q96NB3 372 aaPredicted RBP18.67■□□□□ 0.58
GPN1-212ENST00000616939 BCL2L12Q9HB09 334 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 PRR36Q9H6K5 1346 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 CTIFO43310 598 aaKnown RBP18.67■□□□□ 0.58
GPN1-212ENST00000616939 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
GPN1-212ENST00000616939 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
GPN1-212ENST00000616939 ZSCAN31Q96LW9 406 aaPredicted RBP18.67■□□□□ 0.58
GPN1-212ENST00000616939 SMC3Q9UQE7 1217 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 USP6P35125 1406 aa18.67■□□□□ 0.58
GPN1-212ENST00000616939 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
GPN1-212ENST00000616939 POLA2Q14181 598 aa18.66■□□□□ 0.58
GPN1-212ENST00000616939 CCDC171Q6TFL3 1326 aa18.66■□□□□ 0.58
GPN1-212ENST00000616939 AK2P54819 239 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 RUFY3Q7L099 469 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 PI4K2BQ8TCG2 481 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 KCNB2Q92953 911 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 SH2B1Q9NRF2 756 aaPredicted RBP18.65■□□□□ 0.58
GPN1-212ENST00000616939 PLEKHG3A1L390 1219 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 TM6SF1Q9BZW5 370 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 IL25Q9H293 177 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 KCNF1Q9H3M0 494 aa18.65■□□□□ 0.58
GPN1-212ENST00000616939 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.65■□□□□ 0.58
GPN1-212ENST00000616939 ADGRL3Q9HAR2 1447 aa18.64■□□□□ 0.57
GPN1-212ENST00000616939 KIF20AO95235 890 aa18.64■□□□□ 0.57
GPN1-212ENST00000616939 LRRFIP2Q9Y608 721 aaKnown RBP18.64■□□□□ 0.57
GPN1-212ENST00000616939 USP54Q70EL1 1684 aa18.64■□□□□ 0.57
GPN1-212ENST00000616939 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
GPN1-212ENST00000616939 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.57
GPN1-212ENST00000616939 CCDC192P0DO97 292 aa18.63■□□□□ 0.57
GPN1-212ENST00000616939 MTHFSDQ2M296 383 aaKnown RBP18.63■□□□□ 0.57
GPN1-212ENST00000616939 CNTROBQ8N137 903 aa18.63■□□□□ 0.57
GPN1-212ENST00000616939 MTMR6Q9Y217 621 aa18.63■□□□□ 0.57
GPN1-212ENST00000616939 PDCL2Q8N4E4 241 aa18.63■□□□□ 0.57
GPN1-212ENST00000616939 FLT4P35916 1363 aa18.62■□□□□ 0.57
GPN1-212ENST00000616939 ELP1O95163 1332 aa18.62■□□□□ 0.57
GPN1-212ENST00000616939 IGSF1Q8N6C5 1336 aa18.62■□□□□ 0.57
GPN1-212ENST00000616939 PTPRUQ92729 1446 aa18.62■□□□□ 0.57
GPN1-212ENST00000616939 FOXD4L6Q3SYB3 417 aaPredicted RBP18.62■□□□□ 0.57
GPN1-212ENST00000616939 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
GPN1-212ENST00000616939 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
GPN1-212ENST00000616939 FOXD4L3Q6VB84 417 aaPredicted RBP18.62■□□□□ 0.57
GPN1-212ENST00000616939 PYCARDQ9ULZ3 195 aa18.62■□□□□ 0.57
GPN1-212ENST00000616939 CEP170BQ9Y4F5 1589 aaPredicted RBP18.61■□□□□ 0.57
GPN1-212ENST00000616939 AP5Z1O43299 807 aa18.61■□□□□ 0.57
GPN1-212ENST00000616939 FIBPO43427 364 aa18.61■□□□□ 0.57
GPN1-212ENST00000616939 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
GPN1-212ENST00000616939 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
GPN1-212ENST00000616939 C17orf53Q8N3J3 647 aaPredicted RBP18.61■□□□□ 0.57
GPN1-212ENST00000616939 FAM200AQ8TCP9 573 aa18.61■□□□□ 0.57
GPN1-212ENST00000616939 USP44Q9H0E7 712 aa18.61■□□□□ 0.57
GPN1-212ENST00000616939 TTC41PQ6P2S7 1318 aa18.61■□□□□ 0.57
GPN1-212ENST00000616939 RIOK3O14730 519 aaKnown RBP18.6■□□□□ 0.57
GPN1-212ENST00000616939 KIF1BPQ96EK5 621 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 FEZ1Q99689 392 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 PRDM10Q9NQV6 1147 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 HYPKQ9NX55 129 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 GIMAP6Q6P9H5 292 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.6■□□□□ 0.57
GPN1-212ENST00000616939 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 RHPN1Q8TCX5 695 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 TSC1Q92574 1164 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
GPN1-212ENST00000616939 ATP2B3Q16720 1220 aa18.59■□□□□ 0.57
GPN1-212ENST00000616939 HSP90AB4PQ58FF6 505 aa18.59■□□□□ 0.57
GPN1-212ENST00000616939 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
GPN1-212ENST00000616939 RUFY2Q8WXA3 655 aa18.59■□□□□ 0.57
GPN1-212ENST00000616939 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
GPN1-212ENST00000616939 GJB2P29033 226 aa18.58■□□□□ 0.57
GPN1-212ENST00000616939 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.57
GPN1-212ENST00000616939 MPNDQ8N594 471 aa18.58■□□□□ 0.56
GPN1-212ENST00000616939 ARID3AQ99856 593 aa18.58■□□□□ 0.56
GPN1-212ENST00000616939 ZSWIM6Q9HCJ5 1215 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms