RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 SSH2Q76I76 1423 aa10.29□□□□□ -0.76
MALAT1-208ENST00000616527 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.28□□□□□ -0.76
MALAT1-208ENST00000616527 GCGRP47871 477 aa10.28□□□□□ -0.76
MALAT1-208ENST00000616527 WWC1Q8IX03 1113 aa10.28□□□□□ -0.76
MALAT1-208ENST00000616527 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
MALAT1-208ENST00000616527 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
MALAT1-208ENST00000616527 DIAPH1O60610 1272 aaKnown RBP10.27□□□□□ -0.77
MALAT1-208ENST00000616527 PLEKHF1Q96S99 279 aa10.27□□□□□ -0.77
MALAT1-208ENST00000616527 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
MALAT1-208ENST00000616527 POLKQ9UBT6 870 aa10.27□□□□□ -0.77
MALAT1-208ENST00000616527 RIMS1Q86UR5 1692 aaKnown RBP10.27□□□□□ -0.77
MALAT1-208ENST00000616527 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 USP6P35125 1406 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 TOPAZ1Q8N9V7 1692 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 NKTRP30414 1462 aaKnown RBP10.26□□□□□ -0.77
MALAT1-208ENST00000616527 CDK12Q9NYV4 1490 aaPredicted RBP10.26□□□□□ -0.77
MALAT1-208ENST00000616527 CT47B1P0C2W7 299 aaPredicted RBP10.26□□□□□ -0.77
MALAT1-208ENST00000616527 TNNT2P45379 298 aaPredicted RBP10.26□□□□□ -0.77
MALAT1-208ENST00000616527 SCUBE3Q8IX30 993 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 TCP11L2Q8N4U5 519 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 COG3Q96JB2 828 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 MON2Q7Z3U7 1717 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 IL16Q14005 1332 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 TTC21BQ7Z4L5 1316 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 KIF20BQ96Q89 1820 aa10.26□□□□□ -0.77
MALAT1-208ENST00000616527 TRIM66O15016 1216 aa10.25□□□□□ -0.77
MALAT1-208ENST00000616527 TLL1O43897 1013 aa10.25□□□□□ -0.77
MALAT1-208ENST00000616527 U2AF1L5P0DN76 240 aaPredicted RBP10.25□□□□□ -0.77
MALAT1-208ENST00000616527 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
MALAT1-208ENST00000616527 U2AF1Q01081 240 aaKnown RBP eCLIP10.25□□□□□ -0.771e-323■■□□□ 11.8
MALAT1-208ENST00000616527 PUS10Q3MIT2 529 aaKnown RBP10.25□□□□□ -0.77
MALAT1-208ENST00000616527 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
MALAT1-208ENST00000616527 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.25□□□□□ -0.77
MALAT1-208ENST00000616527 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
MALAT1-208ENST00000616527 ACEP12821 1306 aa10.25□□□□□ -0.77
MALAT1-208ENST00000616527 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
MALAT1-208ENST00000616527 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
MALAT1-208ENST00000616527 AKAP12Q02952 1782 aa10.24□□□□□ -0.77
MALAT1-208ENST00000616527 KCNA6P17658 529 aa10.24□□□□□ -0.77
MALAT1-208ENST00000616527 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
MALAT1-208ENST00000616527 FUT2Q10981 343 aa10.24□□□□□ -0.77
MALAT1-208ENST00000616527 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
MALAT1-208ENST00000616527 LRRC7Q96NW7 1537 aa10.23□□□□□ -0.77
MALAT1-208ENST00000616527 ADH1BP00325 375 aa10.23□□□□□ -0.77
MALAT1-208ENST00000616527 CD46P15529 392 aa10.23□□□□□ -0.77
MALAT1-208ENST00000616527 MORN1Q5T089 497 aa10.23□□□□□ -0.77
MALAT1-208ENST00000616527 NME9Q86XW9 330 aa10.23□□□□□ -0.77
MALAT1-208ENST00000616527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.23□□□□□ -0.77
MALAT1-208ENST00000616527 PRKD2Q9BZL6 878 aa10.23□□□□□ -0.77
MALAT1-208ENST00000616527 KIF24Q5T7B8 1368 aa10.23□□□□□ -0.77
MALAT1-208ENST00000616527 NPHP4O75161 1426 aaPredicted RBP10.23□□□□□ -0.77
MALAT1-208ENST00000616527 IL13P35225 146 aa10.22□□□□□ -0.77
MALAT1-208ENST00000616527 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
MALAT1-208ENST00000616527 IRX6P78412 446 aaPredicted RBP10.22□□□□□ -0.77
MALAT1-208ENST00000616527 PDE4DQ08499 809 aa10.22□□□□□ -0.77
MALAT1-208ENST00000616527 MYH16Q9H6N6 1097 aa10.22□□□□□ -0.77
MALAT1-208ENST00000616527 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
MALAT1-208ENST00000616527 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
MALAT1-208ENST00000616527 CLCN1P35523 988 aa10.21□□□□□ -0.77
MALAT1-208ENST00000616527 AAMPQ13685 434 aa10.21□□□□□ -0.77
MALAT1-208ENST00000616527 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
MALAT1-208ENST00000616527 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.77
MALAT1-208ENST00000616527 RNF223E7ERA6 249 aa10.2□□□□□ -0.78
MALAT1-208ENST00000616527 CHD2O14647 1828 aaKnown RBP10.2□□□□□ -0.78
MALAT1-208ENST00000616527 PDE3AQ14432 1141 aa10.2□□□□□ -0.78
MALAT1-208ENST00000616527 ITSN1Q15811 1721 aa10.2□□□□□ -0.78
MALAT1-208ENST00000616527 GRIPAP1Q4V328 841 aa10.2□□□□□ -0.78
MALAT1-208ENST00000616527 ADGRL3Q9HAR2 1447 aa10.2□□□□□ -0.78
MALAT1-208ENST00000616527 MAPK8IP3Q9UPT6 1336 aa10.2□□□□□ -0.78
MALAT1-208ENST00000616527 NCOA3Q9Y6Q9 1424 aa10.2□□□□□ -0.78
MALAT1-208ENST00000616527 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
MALAT1-208ENST00000616527 U2SURPO15042 1029 aaKnown RBP10.19□□□□□ -0.78
MALAT1-208ENST00000616527 S1PR4O95977 384 aa10.19□□□□□ -0.78
MALAT1-208ENST00000616527 NEFMP07197 916 aa10.19□□□□□ -0.78
MALAT1-208ENST00000616527 CALD1Q05682 793 aaKnown RBP10.19□□□□□ -0.78
MALAT1-208ENST00000616527 SPSB2Q99619 263 aa10.19□□□□□ -0.78
MALAT1-208ENST00000616527 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
MALAT1-208ENST00000616527 NGDNQ8NEJ9 315 aaKnown RBP10.18□□□□□ -0.78
MALAT1-208ENST00000616527 ZNF428Q96B54 188 aa10.18□□□□□ -0.78
MALAT1-208ENST00000616527 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
MALAT1-208ENST00000616527 SLC6A16Q9GZN6 736 aa10.18□□□□□ -0.78
MALAT1-208ENST00000616527 KDM4CQ9H3R0 1056 aa10.18□□□□□ -0.78
MALAT1-208ENST00000616527 SLC27A5Q9Y2P5 690 aa10.18□□□□□ -0.78
MALAT1-208ENST00000616527 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
MALAT1-208ENST00000616527 LMOD3Q0VAK6 560 aa10.17□□□□□ -0.78
MALAT1-208ENST00000616527 NFE2L2Q16236 605 aa10.17□□□□□ -0.78
MALAT1-208ENST00000616527 B4GALNT3Q6L9W6 998 aa10.17□□□□□ -0.78
MALAT1-208ENST00000616527 ANKLE1Q8NAG6 615 aa10.17□□□□□ -0.78
MALAT1-208ENST00000616527 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
MALAT1-208ENST00000616527 FAM217BQ9NTX9 383 aaPredicted RBP10.17□□□□□ -0.78
MALAT1-208ENST00000616527 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
MALAT1-208ENST00000616527 USP54Q70EL1 1684 aa10.17□□□□□ -0.78
MALAT1-208ENST00000616527 NALCNQ8IZF0 1738 aa10.16□□□□□ -0.78
MALAT1-208ENST00000616527 KDM4AO75164 1064 aa10.16□□□□□ -0.78
MALAT1-208ENST00000616527 EXOC6Q8TAG9 804 aa10.16□□□□□ -0.78
MALAT1-208ENST00000616527 SBNO1A3KN83 1393 aa10.15□□□□□ -0.78
MALAT1-208ENST00000616527 PPEF1O14829 653 aaPredicted RBP10.15□□□□□ -0.78
MALAT1-208ENST00000616527 FMNL1O95466 1100 aaPredicted RBP10.15□□□□□ -0.78
MALAT1-208ENST00000616527 PRKAR2BP31323 418 aa10.15□□□□□ -0.78
MALAT1-208ENST00000616527 RARSP54136 660 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms