RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 VGLL3A8MV65 326 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 GCKP35557 465 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 SAFB2Q14151 953 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL12A1-211ENST00000615798 RAI14Q9P0K7 980 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 ADGRL2O95490 1459 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 KIAA0556O60303 1618 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 B4GALNT4Q76KP1 1039 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 NAA15Q9BXJ9 866 aaKnown RBP10.73□□□□□ -0.69
COL12A1-211ENST00000615798 FSD2A1L4K1 749 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 PFDN1O60925 122 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 CETN2P41208 172 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 CFAP58Q5T655 872 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 LRPPRCP42704 1394 aaKnown RBP10.73□□□□□ -0.69
COL12A1-211ENST00000615798 GPATCH8Q9UKJ3 1502 aaKnown RBP10.73□□□□□ -0.69
COL12A1-211ENST00000615798 ANAPC15P60006 121 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 ARHGAP29Q52LW3 1261 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 TNMDQ9H2S6 317 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 TPD52P55327 224 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-211ENST00000615798 MAP3K9P80192 1104 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 TCP11L2Q8N4U5 519 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 PLIN1O60240 522 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 DDX58O95786 925 aaKnown RBP10.73□□□□□ -0.69
COL12A1-211ENST00000615798 CDK5RAP3Q96JB5 506 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 MACROD2A1Z1Q3 448 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 HSF2BPO75031 334 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 SPATS2LQ9NUQ6 558 aaKnown RBP10.73□□□□□ -0.69
COL12A1-211ENST00000615798 CCDC110Q8TBZ0 833 aa10.73□□□□□ -0.69
COL12A1-211ENST00000615798 BUB1BO60566 1050 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-211ENST00000615798 CEP104O60308 925 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 CIB2O75838 187 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 ADGBQ8N7X0 1667 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-211ENST00000615798 CCDC114Q96M63 670 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 GBP5Q96PP8 586 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 MAP4K4O95819 1239 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-211ENST00000615798 POTEDQ86YR6 584 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 ALDH1L2Q3SY69 923 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 NGDNQ8NEJ9 315 aaKnown RBP10.72□□□□□ -0.69
COL12A1-211ENST00000615798 GOPCQ9HD26 462 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 MXRA7P84157 204 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 SRCIN1Q9C0H9 1055 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 ZMYM4Q5VZL5 1548 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 NAA16Q6N069 864 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-211ENST00000615798 KIF5AQ12840 1032 aa10.72□□□□□ -0.69
COL12A1-211ENST00000615798 STMN4Q9H169 189 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-211ENST00000615798 USO1O60763 962 aaKnown RBP10.71□□□□□ -0.69
COL12A1-211ENST00000615798 CCDC65Q8IXS2 484 aa10.71□□□□□ -0.69
COL12A1-211ENST00000615798 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
COL12A1-211ENST00000615798 PLEKHH1Q9ULM0 1364 aa10.71□□□□□ -0.69
COL12A1-211ENST00000615798 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
COL12A1-211ENST00000615798 GSTTP1A0A1W2PQM5 241 aa10.71□□□□□ -0.69
COL12A1-211ENST00000615798 MVPQ14764 893 aaKnown RBP10.71□□□□□ -0.69
COL12A1-211ENST00000615798 IFT74Q96LB3 600 aa10.71□□□□□ -0.69
COL12A1-211ENST00000615798 PPP6R1Q9UPN7 881 aa10.71□□□□□ -0.69
COL12A1-211ENST00000615798 NPC1L1Q9UHC9 1359 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 DNAJC8O75937 253 aaPredicted RBP10.71□□□□□ -0.7
COL12A1-211ENST00000615798 NEMFO60524 1076 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 CCDC27Q2M243 656 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 AMOTL1Q8IY63 956 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 PAXBP1Q9Y5B6 917 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 GAS2L2Q8NHY3 880 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 SERPINA10Q9UK55 444 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 FCHSD2O94868 740 aa10.71□□□□□ -0.7
COL12A1-211ENST00000615798 SLFN5Q08AF3 891 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 TRDNQ13061 729 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 ZMYM3Q14202 1370 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 KIF4BQ2VIQ3 1234 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 ATF7IPQ6VMQ6 1270 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 JMYQ8N9B5 988 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 IL16Q14005 1332 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 NFXL1Q6ZNB6 911 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 STMN2Q93045 179 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 PSMA5P28066 241 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 PHLDB2Q86SQ0 1253 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 TTC14Q96N46 770 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 PARD3Q8TEW0 1356 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 EIF2AQ9BY44 585 aaKnown RBP10.7□□□□□ -0.7
COL12A1-211ENST00000615798 XBP1P17861 261 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 CEBPZQ03701 1054 aaKnown RBP10.7□□□□□ -0.7
COL12A1-211ENST00000615798 BICDL2A1A5D9 508 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 CCDC40Q4G0X9 1142 aa10.7□□□□□ -0.7
COL12A1-211ENST00000615798 ZNF397Q8NF99 534 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-211ENST00000615798 ASXL1Q8IXJ9 1541 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 MAATS1Q7Z4T9 603 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 BICD1Q96G01 975 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 CNPY4Q8N129 248 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 OPA1O60313 960 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 GFAPP14136 432 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 ATP2C2O75185 946 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 POLE3Q9NRF9 147 aa10.69□□□□□ -0.7
COL12A1-211ENST00000615798 CCDC155Q8N6L0 562 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 484.2 ms