RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 STK11IPQ8N1F8 1099 aa13.98□□□□□ -0.17
CDH5-208ENST00000614547 TMX1Q9H3N1 280 aa13.98□□□□□ -0.17
CDH5-208ENST00000614547 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
CDH5-208ENST00000614547 ATP7AQ04656 1500 aa13.98□□□□□ -0.17
CDH5-208ENST00000614547 TPM3P06753 285 aa13.98□□□□□ -0.17
CDH5-208ENST00000614547 IBTKQ9P2D0 1353 aaPredicted RBP13.97□□□□□ -0.17
CDH5-208ENST00000614547 NPATQ14207 1427 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 NCOA3Q9Y6Q9 1424 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 POLR3GO15318 223 aaPredicted RBP13.97□□□□□ -0.17
CDH5-208ENST00000614547 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 NUDT16Q96DE0 195 aaKnown RBP13.97□□□□□ -0.17
CDH5-208ENST00000614547 PRDM4Q9UKN5 801 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 CYP2E1P05181 493 aaPredicted RBP13.97□□□□□ -0.17
CDH5-208ENST00000614547 DMTNQ08495 405 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 A0A087WWV3 80 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 HTATSF1O43719 755 aaKnown RBP13.97□□□□□ -0.17
CDH5-208ENST00000614547 SKIDA1Q1XH10 827 aa13.97□□□□□ -0.17
CDH5-208ENST00000614547 TYRO3Q06418 890 aa13.96□□□□□ -0.17
CDH5-208ENST00000614547 PTPN14Q15678 1187 aa13.96□□□□□ -0.17
CDH5-208ENST00000614547 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
CDH5-208ENST00000614547 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.17
CDH5-208ENST00000614547 LRRC2Q9BYS8 371 aa13.96□□□□□ -0.17
CDH5-208ENST00000614547 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
CDH5-208ENST00000614547 AACSQ86V21 672 aa13.96□□□□□ -0.18
CDH5-208ENST00000614547 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.18
CDH5-208ENST00000614547 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
CDH5-208ENST00000614547 BOLA2Q9H3K6 86 aa13.95□□□□□ -0.18
CDH5-208ENST00000614547 ZBTB22O15209 634 aa13.95□□□□□ -0.18
CDH5-208ENST00000614547 RPGRIP1LQ68CZ1 1315 aa13.95□□□□□ -0.18
CDH5-208ENST00000614547 TAF7Q15545 349 aaPredicted RBP13.95□□□□□ -0.18
CDH5-208ENST00000614547 BLOC1S2Q6QNY1 142 aa13.95□□□□□ -0.18
CDH5-208ENST00000614547 CREBRFQ8IUR6 639 aa13.95□□□□□ -0.18
CDH5-208ENST00000614547 IL13P35225 146 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 FAM200AQ8TCP9 573 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 ARHGEF5Q12774 1597 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 LIG1P18858 919 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 HSPA2P54652 639 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 CEP135Q66GS9 1140 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 INTS4Q96HW7 963 aaKnown RBP13.94□□□□□ -0.18
CDH5-208ENST00000614547 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 BIN1O00499 593 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 ME1P48163 572 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 EIF4A2Q14240 407 aaKnown RBP13.94□□□□□ -0.18
CDH5-208ENST00000614547 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 MNS1Q8NEH6 495 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 CHMP4AQ9BY43 222 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 GTPBP4Q9BZE4 634 aaKnown RBP13.94□□□□□ -0.18
CDH5-208ENST00000614547 SNX14Q9Y5W7 946 aa13.94□□□□□ -0.18
CDH5-208ENST00000614547 HDGFP51858 240 aaKnown RBP13.93□□□□□ -0.18
CDH5-208ENST00000614547 G3BP1Q13283 466 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH5-208ENST00000614547 DNAJC2Q99543 621 aaKnown RBP13.93□□□□□ -0.18
CDH5-208ENST00000614547 KINO60870 393 aaKnown RBP13.93□□□□□ -0.18
CDH5-208ENST00000614547 CLEC17AQ6ZS10 378 aa13.93□□□□□ -0.18
CDH5-208ENST00000614547 RHPN1Q8TCX5 695 aa13.93□□□□□ -0.18
CDH5-208ENST00000614547 PREX2Q70Z35 1606 aa13.93□□□□□ -0.18
CDH5-208ENST00000614547 GTF2F1P35269 517 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH5-208ENST00000614547 TEFQ10587 303 aa13.93□□□□□ -0.18
CDH5-208ENST00000614547 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
CDH5-208ENST00000614547 PTPRCP08575 1304 aa13.92□□□□□ -0.18
CDH5-208ENST00000614547 LARGE1O95461 756 aa13.92□□□□□ -0.18
CDH5-208ENST00000614547 RNF20Q5VTR2 975 aa13.92□□□□□ -0.18
CDH5-208ENST00000614547 ABCC1P33527 1531 aa13.92□□□□□ -0.18
CDH5-208ENST00000614547 PDCP20941 246 aa13.92□□□□□ -0.18
CDH5-208ENST00000614547 NLRP6P59044 892 aa13.92□□□□□ -0.18
CDH5-208ENST00000614547 GTF3C6Q969F1 213 aa13.92□□□□□ -0.18
CDH5-208ENST00000614547 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 SKILP12757 684 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 ZSCAN20P17040 1043 aaPredicted RBP13.91□□□□□ -0.18
CDH5-208ENST00000614547 LTKP29376 864 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 PHAXQ9H814 394 aaKnown RBP13.91□□□□□ -0.18
CDH5-208ENST00000614547 USP16Q9Y5T5 823 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 POGZQ7Z3K3 1410 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 ANAPC15P60006 121 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
CDH5-208ENST00000614547 CCDC61Q9Y6R9 512 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 PDILTQ8N807 584 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 CBX8Q9HC52 389 aa13.91□□□□□ -0.18
CDH5-208ENST00000614547 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
CDH5-208ENST00000614547 CDC37L1Q7L3B6 337 aa13.9□□□□□ -0.18
CDH5-208ENST00000614547 KIAA1524Q8TCG1 905 aa13.9□□□□□ -0.18
CDH5-208ENST00000614547 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.19
CDH5-208ENST00000614547 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.19
CDH5-208ENST00000614547 TTLL5Q6EMB2 1281 aa13.9□□□□□ -0.19
CDH5-208ENST00000614547 RIMS2Q9UQ26 1411 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 PSMA5P28066 241 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 HSP90AA4PQ58FG1 418 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 RAB11FIP4Q86YS3 637 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 MADDQ8WXG6 1647 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 ARID5BQ14865 1188 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 ELF2Q15723 593 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
CDH5-208ENST00000614547 IL25Q9H293 177 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms