RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TOMM70O94826 608 aa24.06■■□□□ 1.44
SMN2-213ENST00000614240 CANXP27824 592 aaKnown RBP24.06■■□□□ 1.44
SMN2-213ENST00000614240 VSIG10Q8N0Z9 540 aa24.06■■□□□ 1.44
SMN2-213ENST00000614240 STARD3NLO95772 234 aa24.05■■□□□ 1.44
SMN2-213ENST00000614240 NFIXQ14938 502 aa24.05■■□□□ 1.44
SMN2-213ENST00000614240 C16orf71Q8IYS4 520 aaPredicted RBP24.05■■□□□ 1.44
SMN2-213ENST00000614240 RNF181Q9P0P0 153 aa24.05■■□□□ 1.44
SMN2-213ENST00000614240 TEFQ10587 303 aa24.04■■□□□ 1.44
SMN2-213ENST00000614240 GAS2L2Q8NHY3 880 aa24.03■■□□□ 1.44
SMN2-213ENST00000614240 KCPQ6ZWJ8 1503 aa24.03■■□□□ 1.44
SMN2-213ENST00000614240 GNAT3A8MTJ3 354 aa24.02■■□□□ 1.44
SMN2-213ENST00000614240 SERPINB2P05120 415 aa24.02■■□□□ 1.44
SMN2-213ENST00000614240 APLP1P51693 650 aa24.02■■□□□ 1.44
SMN2-213ENST00000614240 A0A087WZG4 1122 aa24.01■■□□□ 1.43
SMN2-213ENST00000614240 BICDL1Q6ZP65 573 aa24.01■■□□□ 1.43
SMN2-213ENST00000614240 KDM2BQ8NHM5 1336 aa24.01■■□□□ 1.43
SMN2-213ENST00000614240 BRCA1P38398 1863 aaKnown RBP24■■□□□ 1.43
SMN2-213ENST00000614240 ZNF330Q9Y3S2 320 aaPredicted RBP24■■□□□ 1.43
SMN2-213ENST00000614240 NPC1L1Q9UHC9 1359 aa24■■□□□ 1.43
SMN2-213ENST00000614240 ADAMTS7Q9UKP4 1686 aa23.99■■□□□ 1.43
SMN2-213ENST00000614240 TEX13AQ9BXU3 409 aaPredicted RBP23.99■■□□□ 1.43
SMN2-213ENST00000614240 BCL2L12Q9HB09 334 aa23.99■■□□□ 1.43
SMN2-213ENST00000614240 ARFGEF1Q9Y6D6 1849 aa23.98■■□□□ 1.43
SMN2-213ENST00000614240 ZNF790Q6PG37 636 aa23.98■■□□□ 1.43
SMN2-213ENST00000614240 NPM2Q86SE8 214 aaKnown RBP23.98■■□□□ 1.43
SMN2-213ENST00000614240 IL17REQ8NFR9 667 aa23.98■■□□□ 1.43
SMN2-213ENST00000614240 ZNF496Q96IT1 587 aaPredicted RBP23.98■■□□□ 1.43
SMN2-213ENST00000614240 CFAP53Q96M91 514 aa23.98■■□□□ 1.43
SMN2-213ENST00000614240 IFFO2Q5TF58 517 aa23.97■■□□□ 1.43
SMN2-213ENST00000614240 C2CD5Q86YS7 1000 aa23.97■■□□□ 1.43
SMN2-213ENST00000614240 RBM46Q8TBY0 533 aaKnown RBP23.97■■□□□ 1.43
SMN2-213ENST00000614240 H0YIN7 160 aa23.96■■□□□ 1.43
SMN2-213ENST00000614240 EIF5P55010 431 aaKnown RBP23.96■■□□□ 1.43
SMN2-213ENST00000614240 TTLL6Q8N841 843 aa23.96■■□□□ 1.43
SMN2-213ENST00000614240 COL3A1P02461 1466 aaPredicted RBP23.95■■□□□ 1.42
SMN2-213ENST00000614240 RRAGCQ9HB90 399 aa23.95■■□□□ 1.42
SMN2-213ENST00000614240 HEG1Q9ULI3 1381 aa23.94■■□□□ 1.42
SMN2-213ENST00000614240 RASSF7Q02833 373 aa23.94■■□□□ 1.42
SMN2-213ENST00000614240 FMNL2Q96PY5 1086 aa23.94■■□□□ 1.42
SMN2-213ENST00000614240 VIRMAQ69YN4 1812 aaKnown RBP23.94■■□□□ 1.42
SMN2-213ENST00000614240 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
SMN2-213ENST00000614240 TBC1D2BQ9UPU7 963 aa23.93■■□□□ 1.42
SMN2-213ENST00000614240 NUDCQ9Y266 331 aa23.93■■□□□ 1.42
SMN2-213ENST00000614240 TBC1D9BQ66K14 1250 aa23.92■■□□□ 1.42
SMN2-213ENST00000614240 CEP350Q5VT06 3117 aa23.91■■□□□ 1.42
SMN2-213ENST00000614240 BTBD11A6QL63 1104 aa23.91■■□□□ 1.42
SMN2-213ENST00000614240 NPHP1O15259 732 aa23.91■■□□□ 1.42
SMN2-213ENST00000614240 LMNB1P20700 586 aa23.91■■□□□ 1.42
SMN2-213ENST00000614240 PHACTR3Q96KR7 559 aa23.91■■□□□ 1.42
SMN2-213ENST00000614240 IL6STP40189 918 aaPredicted RBP23.9■■□□□ 1.42
SMN2-213ENST00000614240 FSTL1Q12841 308 aa23.9■■□□□ 1.42
SMN2-213ENST00000614240 ZNF622Q969S3 477 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMN2-213ENST00000614240 UBR2Q8IWV8 1755 aa23.9■■□□□ 1.42
SMN2-213ENST00000614240 A1BGP04217 495 aa23.89■■□□□ 1.41
SMN2-213ENST00000614240 PDE6BP35913 854 aa23.89■■□□□ 1.41
SMN2-213ENST00000614240 CARMIL3Q8ND23 1372 aa23.89■■□□□ 1.41
SMN2-213ENST00000614240 AFDNP55196 1824 aaKnown RBP23.89■■□□□ 1.41
SMN2-213ENST00000614240 U2AF1L5P0DN76 240 aaPredicted RBP23.88■■□□□ 1.41
SMN2-213ENST00000614240 U2AF1Q01081 240 aaKnown RBP eCLIP23.88■■□□□ 1.41
SMN2-213ENST00000614240 RSPH6AQ9H0K4 717 aa23.88■■□□□ 1.41
SMN2-213ENST00000614240 NRXN2Q9P2S2 1712 aa23.87■■□□□ 1.41
SMN2-213ENST00000614240 ZC3H4Q9UPT8 1303 aaKnown RBP23.87■■□□□ 1.41
SMN2-213ENST00000614240 KCNQ3O43525 872 aa23.87■■□□□ 1.41
SMN2-213ENST00000614240 CCDC24Q8N4L8 307 aa23.87■■□□□ 1.41
SMN2-213ENST00000614240 DNAJC5GQ8N7S2 189 aa23.87■■□□□ 1.41
SMN2-213ENST00000614240 RTF1Q92541 710 aaKnown RBP23.87■■□□□ 1.41
SMN2-213ENST00000614240 SETDB2Q96T68 719 aa23.87■■□□□ 1.41
SMN2-213ENST00000614240 BRIP1Q9BX63 1249 aa23.87■■□□□ 1.41
SMN2-213ENST00000614240 PDZRN3Q9UPQ7 1066 aa23.87■■□□□ 1.41
SMN2-213ENST00000614240 ZNF219Q9P2Y4 722 aaPredicted RBP23.86■■□□□ 1.41
SMN2-213ENST00000614240 CEMIPQ8WUJ3 1361 aa23.86■■□□□ 1.41
SMN2-213ENST00000614240 PRR5LQ6MZQ0 368 aa23.85■■□□□ 1.41
SMN2-213ENST00000614240 GLTPD2A6NH11 291 aa23.84■■□□□ 1.41
SMN2-213ENST00000614240 DZIP3Q86Y13 1208 aaKnown RBP23.84■■□□□ 1.41
SMN2-213ENST00000614240 CNBD1Q8NA66 436 aa23.84■■□□□ 1.41
SMN2-213ENST00000614240 SMC1BQ8NDV3 1235 aa23.84■■□□□ 1.41
SMN2-213ENST00000614240 C21orf2O43822 256 aa23.83■■□□□ 1.41
SMN2-213ENST00000614240 CAMTA2O94983 1202 aa23.83■■□□□ 1.41
SMN2-213ENST00000614240 PRELPP51888 382 aa23.83■■□□□ 1.41
SMN2-213ENST00000614240 HTRA3P83110 453 aa23.83■■□□□ 1.41
SMN2-213ENST00000614240 MCM10Q7L590 875 aa23.83■■□□□ 1.41
SMN2-213ENST00000614240 SBF1O95248 1867 aa23.83■■□□□ 1.4
SMN2-213ENST00000614240 VEGFAP15692 232 aaPredicted RBP23.82■■□□□ 1.4
SMN2-213ENST00000614240 PPP2R1AP30153 589 aa23.82■■□□□ 1.4
SMN2-213ENST00000614240 ST5P78524 1137 aa23.82■■□□□ 1.4
SMN2-213ENST00000614240 USP16Q9Y5T5 823 aa23.82■■□□□ 1.4
SMN2-213ENST00000614240 NFKBIEO00221 500 aa23.81■■□□□ 1.4
SMN2-213ENST00000614240 PIP4K2AP48426 406 aaPredicted RBP23.81■■□□□ 1.4
SMN2-213ENST00000614240 SNRPA1P09661 255 aaKnown RBP23.8■■□□□ 1.4
SMN2-213ENST00000614240 DPY19L2Q6NUT2 758 aa23.8■■□□□ 1.4
SMN2-213ENST00000614240 CNKSR1Q969H4 720 aa23.8■■□□□ 1.4
SMN2-213ENST00000614240 DLEC1Q9Y238 1755 aa23.8■■□□□ 1.4
SMN2-213ENST00000614240 TNRC6CQ9HCJ0 1690 aaKnown RBP23.79■■□□□ 1.4
SMN2-213ENST00000614240 SIPA1L3O60292 1781 aaPredicted RBP23.79■■□□□ 1.4
SMN2-213ENST00000614240 PRAMEF22A3QJZ6 481 aa23.78■■□□□ 1.4
SMN2-213ENST00000614240 ERFEQ4G0M1 354 aa23.78■■□□□ 1.4
SMN2-213ENST00000614240 KLRG1Q96E93 195 aa23.78■■□□□ 1.4
SMN2-213ENST00000614240 ZNF652Q9Y2D9 606 aa23.78■■□□□ 1.4
SMN2-213ENST00000614240 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
SMN2-213ENST00000614240 DCTN1Q14203 1278 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms