RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 RTL5Q5HYW3 569 aaPredicted RBP7.58□□□□□ -1.2
CRNDE-212ENST00000613942 G2E3Q7L622 706 aa7.58□□□□□ -1.2
CRNDE-212ENST00000613942 NFATC2IPQ8NCF5 419 aa7.58□□□□□ -1.2
CRNDE-212ENST00000613942 PRAMEF22A3QJZ6 481 aa7.58□□□□□ -1.2
CRNDE-212ENST00000613942 C1orf115Q9H7X2 142 aa7.58□□□□□ -1.2
CRNDE-212ENST00000613942 IPO8O15397 1037 aaKnown RBP7.57□□□□□ -1.2
CRNDE-212ENST00000613942 SLC52A2Q9HAB3 445 aa7.57□□□□□ -1.2
CRNDE-212ENST00000613942 BABAM1Q9NWV8 329 aa7.57□□□□□ -1.2
CRNDE-212ENST00000613942 COL14A1Q05707 1796 aaKnown RBP7.57□□□□□ -1.2
CRNDE-212ENST00000613942 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
CRNDE-212ENST00000613942 EIF2S2P20042 333 aaKnown RBP7.57□□□□□ -1.2
CRNDE-212ENST00000613942 DCAF5Q96JK2 942 aa7.57□□□□□ -1.2
CRNDE-212ENST00000613942 PHF12Q96QT6 1004 aa7.57□□□□□ -1.2
CRNDE-212ENST00000613942 PCDH11XQ9BZA7 1347 aa7.56□□□□□ -1.2
CRNDE-212ENST00000613942 PCDH11YQ9BZA8 1340 aa7.56□□□□□ -1.2
CRNDE-212ENST00000613942 PKD1L3Q7Z443 1732 aa7.56□□□□□ -1.2
CRNDE-212ENST00000613942 VIRMAQ69YN4 1812 aaKnown RBP7.56□□□□□ -1.2
CRNDE-212ENST00000613942 HSPA1LP34931 641 aa7.56□□□□□ -1.2
CRNDE-212ENST00000613942 HDGFL1Q5TGJ6 251 aa7.56□□□□□ -1.2
CRNDE-212ENST00000613942 C8orf37Q96NL8 207 aa7.56□□□□□ -1.2
CRNDE-212ENST00000613942 ANXA1P04083 346 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 MNX1P50219 401 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-212ENST00000613942 ZNF790Q6PG37 636 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 SPRYD3Q8NCJ5 442 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 ARHGAP45Q92619 1136 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 ADAMTS7Q9UKP4 1686 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 JCADQ9P266 1359 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 ABCC4O15439 1325 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 F6X3S4 739 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 CABP4P57796 275 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 CCDC30Q5VVM6 783 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 KDM3BQ7LBC6 1761 aa7.55□□□□□ -1.2
CRNDE-212ENST00000613942 PARP4Q9UKK3 1724 aaKnown RBP7.55□□□□□ -1.2
CRNDE-212ENST00000613942 RGS12O14924 1447 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 GIGYF1O75420 1035 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 HSP90AB1P08238 724 aaKnown RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 NFKBIBQ15653 356 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 ZNF579Q8NAF0 562 aaKnown RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 STK31Q9BXU1 1019 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 SLKQ9H2G2 1235 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 PHAXQ9H814 394 aaKnown RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 DDX19BQ9UMR2 479 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 PLCH1Q4KWH8 1693 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 SCN11AQ9UI33 1791 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 SPATA31A1Q5TZJ5 1347 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 ZNF496Q96IT1 587 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 DCBLD2Q96PD2 775 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 API5Q9BZZ5 524 aaKnown RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 LNPKQ9C0E8 428 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 RWDD1Q9H446 243 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 CHPF2Q9P2E5 772 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 SIPA1L3O60292 1781 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-212ENST00000613942 DISP2A7MBM2 1401 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 PLEKHG2Q9H7P9 1386 aa7.54□□□□□ -1.2
CRNDE-212ENST00000613942 BRD2P25440 801 aaKnown RBP7.53□□□□□ -1.2
CRNDE-212ENST00000613942 FLIIQ13045 1269 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 AAMPQ13685 434 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 NKX1-1Q15270 411 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-212ENST00000613942 PROSER3Q2NL68 480 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 ZBTB40Q9NUA8 1239 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 SHANK3Q9BYB0 1731 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 HEG1Q9ULI3 1381 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 SLIT2O94813 1529 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 ZBTB7BO15156 539 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-212ENST00000613942 FRAT2O75474 233 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-212ENST00000613942 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-212ENST00000613942 SLC4A10Q6U841 1118 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 LRP6O75581 1613 aa7.53□□□□□ -1.2
CRNDE-212ENST00000613942 PTPRCP08575 1304 aa7.52□□□□□ -1.2
CRNDE-212ENST00000613942 SPATA31A5Q5VU36 1347 aa7.52□□□□□ -1.2
CRNDE-212ENST00000613942 SPATA31A7Q8IWB4 1347 aa7.52□□□□□ -1.2
CRNDE-212ENST00000613942 MRC1P22897 1456 aa7.52□□□□□ -1.21
CRNDE-212ENST00000613942 EXOC5O00471 708 aa7.52□□□□□ -1.21
CRNDE-212ENST00000613942 PIP4K2AP48426 406 aaPredicted RBP7.52□□□□□ -1.21
CRNDE-212ENST00000613942 NRAPQ86VF7 1730 aa7.52□□□□□ -1.21
CRNDE-212ENST00000613942 MFAP1P55081 439 aaKnown RBP7.52□□□□□ -1.21
CRNDE-212ENST00000613942 UNC5CLQ8IV45 518 aa7.52□□□□□ -1.21
CRNDE-212ENST00000613942 TTC5Q8N0Z6 440 aa7.52□□□□□ -1.21
CRNDE-212ENST00000613942 USP16Q9Y5T5 823 aa7.52□□□□□ -1.21
CRNDE-212ENST00000613942 SOS1Q07889 1333 aaPredicted RBP7.52□□□□□ -1.21
CRNDE-212ENST00000613942 BCL9LQ86UU0 1499 aa7.52□□□□□ -1.21
CRNDE-212ENST00000613942 ERVV-2B6SEH9 535 aa7.51□□□□□ -1.21
CRNDE-212ENST00000613942 POTEB2H3BUK9 544 aa7.51□□□□□ -1.21
CRNDE-212ENST00000613942 PTCD1O75127 700 aaKnown RBP7.51□□□□□ -1.21
CRNDE-212ENST00000613942 HOXB7P09629 217 aa7.51□□□□□ -1.21
CRNDE-212ENST00000613942 FAM98CQ17RN3 349 aaKnown RBP7.51□□□□□ -1.21
CRNDE-212ENST00000613942 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
CRNDE-212ENST00000613942 MYL6BP14649 208 aa7.5□□□□□ -1.21
CRNDE-212ENST00000613942 PDIA6Q15084 440 aa7.5□□□□□ -1.21
CRNDE-212ENST00000613942 DDB1Q16531 1140 aa7.5□□□□□ -1.21
CRNDE-212ENST00000613942 PIGBQ92521 554 aa7.5□□□□□ -1.21
CRNDE-212ENST00000613942 SYTL4Q96C24 671 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-212ENST00000613942 FMNL2Q96PY5 1086 aa7.5□□□□□ -1.21
CRNDE-212ENST00000613942 MEIS3Q99687 375 aa7.5□□□□□ -1.21
CRNDE-212ENST00000613942 BCL11BQ9C0K0 894 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-212ENST00000613942 FBXO3Q9UK99 471 aa7.5□□□□□ -1.21
CRNDE-212ENST00000613942 SPATA31A6Q5VVP1 1343 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms