RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 CALCOCO1Q9P1Z2 691 aa10.38□□□□□ -0.75
PDE6A-204ENST00000613228 MBD3O95983 291 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 SLC3A2P08195 630 aaKnown RBP10.37□□□□□ -0.75
PDE6A-204ENST00000613228 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 CDCA7Q9BWT1 371 aaPredicted RBP10.37□□□□□ -0.75
PDE6A-204ENST00000613228 HOOK1Q9UJC3 728 aaKnown RBP10.37□□□□□ -0.75
PDE6A-204ENST00000613228 CYP46A1Q9Y6A2 500 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 SART3Q15020 963 aaKnown RBP10.37□□□□□ -0.75
PDE6A-204ENST00000613228 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 ANKRD44Q8N8A2 993 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 EYA1Q99502 592 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 MIS18AQ9NYP9 233 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 USP6P35125 1406 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 NEXMIFQ5QGS0 1516 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 PCDH11XQ9BZA7 1347 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 PCDH11YQ9BZA8 1340 aa10.37□□□□□ -0.75
PDE6A-204ENST00000613228 GCP02774 474 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 LTKP29376 864 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 CLTCQ00610 1675 aaKnown RBP10.36□□□□□ -0.75
PDE6A-204ENST00000613228 DIP2BQ9P265 1576 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 ZSCAN30Q86W11 494 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 ZCRB1Q8TBF4 217 aaKnown RBP10.36□□□□□ -0.75
PDE6A-204ENST00000613228 DCAF5Q96JK2 942 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 CGNQ9P2M7 1197 aaKnown RBP10.36□□□□□ -0.75
PDE6A-204ENST00000613228 EXOC5O00471 708 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 IQGAP1P46940 1657 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 TRAK2O60296 914 aa10.36□□□□□ -0.75
PDE6A-204ENST00000613228 FAM83GA6ND36 823 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 DYNC1I1O14576 645 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 TRMT2AQ8IZ69 625 aaKnown RBP10.35□□□□□ -0.75
PDE6A-204ENST00000613228 MYD88Q99836 296 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 TRIM35Q9UPQ4 493 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 TULP4Q9NRJ4 1543 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 XBP1P17861 261 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 SASS6Q6UVJ0 657 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 NACAP1Q9BZK3 213 aa10.35□□□□□ -0.75
PDE6A-204ENST00000613228 LRRFIP2Q9Y608 721 aaKnown RBP10.35□□□□□ -0.75
PDE6A-204ENST00000613228 RNMTO43148 476 aaKnown RBP10.34□□□□□ -0.75
PDE6A-204ENST00000613228 SAFBQ15424 915 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDE6A-204ENST00000613228 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 KSR2Q6VAB6 950 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 NFXL1Q6ZNB6 911 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 MAP3K2Q9Y2U5 619 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 CHL1O00533 1208 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 ATP8B2P98198 1209 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 PDCL2Q8N4E4 241 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
PDE6A-204ENST00000613228 CLGNO14967 610 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 IGHMBP2P38935 993 aaKnown RBP10.34□□□□□ -0.75
PDE6A-204ENST00000613228 NEK4P51957 841 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 BRPF1P55201 1214 aaPredicted RBP10.34□□□□□ -0.75
PDE6A-204ENST00000613228 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 EVI5LQ96CN4 794 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 REREQ9P2R6 1566 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 BRMS1Q9HCU9 246 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 CWC25Q9NXE8 425 aaPredicted RBP10.34□□□□□ -0.75
PDE6A-204ENST00000613228 TRIM34Q9BYJ4 488 aa10.34□□□□□ -0.75
PDE6A-204ENST00000613228 PTCH1Q13635 1447 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 ROBO2Q9HCK4 1378 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 FRMPD1Q5SYB0 1578 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 IGHDP01880 384 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 IL2RBP14784 551 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 DIP2AQ14689 1571 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 KIF20AO95235 890 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 TPM3P06753 285 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 ZNF396Q96N95 335 aaPredicted RBP10.33□□□□□ -0.76
PDE6A-204ENST00000613228 DEF6Q9H4E7 631 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 ZBTB40Q9NUA8 1239 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 SMARCC1Q92922 1105 aaPredicted RBP10.33□□□□□ -0.76
PDE6A-204ENST00000613228 PLEKHF1Q96S99 279 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 PIK3C2BO00750 1634 aa10.33□□□□□ -0.76
PDE6A-204ENST00000613228 HMGB1P09429 215 aaKnown RBP10.33□□□□□ -0.76
PDE6A-204ENST00000613228 AOX1Q06278 1338 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 TOM1O60784 492 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 LRRC59Q96AG4 307 aaKnown RBP10.32□□□□□ -0.76
PDE6A-204ENST00000613228 PHACTR3Q96KR7 559 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 MPHOSPH8Q99549 860 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 ADGRL3Q9HAR2 1447 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 PREX1Q8TCU6 1659 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 ZNF521Q96K83 1311 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 SMC5Q8IY18 1101 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 SPATA31D1Q6ZQQ2 1576 aa10.32□□□□□ -0.76
PDE6A-204ENST00000613228 DCTPP1Q9H773 170 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 SH2B1Q9NRF2 756 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-204ENST00000613228 PDRG1Q9NUG6 133 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 TTC41PQ6P2S7 1318 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-204ENST00000613228 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-204ENST00000613228 CDKL5O76039 1030 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-204ENST00000613228 TIGD1Q96MW7 591 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 EXOC6BQ9Y2D4 811 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 KDM2BQ8NHM5 1336 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 F6X3S4 739 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms