RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
FAM3A-221ENST00000612856 KCNQ3O43525 872 aa13.07□□□□□ -0.32
FAM3A-221ENST00000612856 CWF19L2Q2TBE0 894 aaKnown RBP13.07□□□□□ -0.32
FAM3A-221ENST00000612856 AACSQ86V21 672 aa13.07□□□□□ -0.32
FAM3A-221ENST00000612856 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
FAM3A-221ENST00000612856 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
FAM3A-221ENST00000612856 ALKQ9UM73 1620 aa13.07□□□□□ -0.32
FAM3A-221ENST00000612856 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
FAM3A-221ENST00000612856 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
FAM3A-221ENST00000612856 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
FAM3A-221ENST00000612856 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
FAM3A-221ENST00000612856 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
FAM3A-221ENST00000612856 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
FAM3A-221ENST00000612856 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
FAM3A-221ENST00000612856 MYO5BQ9ULV0 1848 aa13.06□□□□□ -0.32
FAM3A-221ENST00000612856 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
FAM3A-221ENST00000612856 MAP7D2Q96T17 732 aa13.06□□□□□ -0.32
FAM3A-221ENST00000612856 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
FAM3A-221ENST00000612856 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
FAM3A-221ENST00000612856 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 DNAAF4Q8WXU2 420 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 IL13P35225 146 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 ZNF771Q7L3S4 317 aaPredicted RBP13.05□□□□□ -0.32
FAM3A-221ENST00000612856 AAMPQ13685 434 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 METTL24Q5JXM2 366 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
FAM3A-221ENST00000612856 PPLO60437 1756 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 PTPRMP28827 1452 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 CCDC173Q0VFZ6 552 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 BOLA2Q9H3K6 86 aa13.05□□□□□ -0.32
FAM3A-221ENST00000612856 SETD1BQ9UPS6 1966 aaKnown RBP13.04□□□□□ -0.32
FAM3A-221ENST00000612856 FLT4P35916 1363 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 GNPATO15228 680 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
FAM3A-221ENST00000612856 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
FAM3A-221ENST00000612856 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 MEIS3Q99687 375 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 IFT57Q9NWB7 429 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 SKOR2Q2VWA4 1001 aaPredicted RBP13.04□□□□□ -0.32
FAM3A-221ENST00000612856 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
FAM3A-221ENST00000612856 INSRP06213 1382 aa13.03□□□□□ -0.32
FAM3A-221ENST00000612856 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
FAM3A-221ENST00000612856 G2E3Q7L622 706 aa13.03□□□□□ -0.32
FAM3A-221ENST00000612856 MYOM1P52179 1685 aa13.03□□□□□ -0.32
FAM3A-221ENST00000612856 NPHP4O75161 1426 aaPredicted RBP13.03□□□□□ -0.32
FAM3A-221ENST00000612856 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
FAM3A-221ENST00000612856 KDM2BQ8NHM5 1336 aa13.03□□□□□ -0.32
FAM3A-221ENST00000612856 CCT4P50991 539 aaKnown RBP13.03□□□□□ -0.32
FAM3A-221ENST00000612856 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
FAM3A-221ENST00000612856 ZSCAN29Q8IWY8 852 aaPredicted RBP13.03□□□□□ -0.32
FAM3A-221ENST00000612856 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
FAM3A-221ENST00000612856 PPFIA3O75145 1194 aa13.02□□□□□ -0.32
FAM3A-221ENST00000612856 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.32
FAM3A-221ENST00000612856 PREX1Q8TCU6 1659 aa13.02□□□□□ -0.33
FAM3A-221ENST00000612856 PIBF1Q8WXW3 757 aa13.02□□□□□ -0.33
FAM3A-221ENST00000612856 TNPO1Q92973 898 aaKnown RBP13.02□□□□□ -0.33
FAM3A-221ENST00000612856 SETBP1Q9Y6X0 1596 aa13.02□□□□□ -0.33
FAM3A-221ENST00000612856 APBA3O96018 575 aa13.02□□□□□ -0.33
FAM3A-221ENST00000612856 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
FAM3A-221ENST00000612856 TTC39AQ5SRH9 613 aa13.02□□□□□ -0.33
FAM3A-221ENST00000612856 VGLL3A8MV65 326 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
FAM3A-221ENST00000612856 TRIM37O94972 964 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 LDHAL6AQ6ZMR3 332 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 CREBRFQ8IUR6 639 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
FAM3A-221ENST00000612856 SPDYE4A6NLX3 237 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 RAI14Q9P0K7 980 aa13.01□□□□□ -0.33
FAM3A-221ENST00000612856 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
FAM3A-221ENST00000612856 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 CWC27Q6UX04 472 aaKnown RBP13□□□□□ -0.33
FAM3A-221ENST00000612856 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 F8W031 263 aaPredicted RBP13□□□□□ -0.33
FAM3A-221ENST00000612856 SMIM5Q71RC9 77 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 RASSF8Q8NHQ8 419 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 TSC1Q92574 1164 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 ZFYVE9O95405 1425 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
FAM3A-221ENST00000612856 HSP90AB4PQ58FF6 505 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 LRRCC1Q9C099 1032 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 LRP2BPQ9P2M1 347 aa13□□□□□ -0.33
FAM3A-221ENST00000612856 CCNL1Q9UK58 526 aaPredicted RBP13□□□□□ -0.33
FAM3A-221ENST00000612856 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
FAM3A-221ENST00000612856 GRM1Q13255 1194 aa12.99□□□□□ -0.33
FAM3A-221ENST00000612856 IFIT5Q13325 482 aaKnown RBP12.99□□□□□ -0.33
FAM3A-221ENST00000612856 KLHDC4Q8TBB5 520 aa12.99□□□□□ -0.33
FAM3A-221ENST00000612856 VAMP4O75379 141 aa12.99□□□□□ -0.33
FAM3A-221ENST00000612856 LARP6Q9BRS8 491 aaKnown RBP12.99□□□□□ -0.33
FAM3A-221ENST00000612856 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
FAM3A-221ENST00000612856 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
FAM3A-221ENST00000612856 ERC2O15083 957 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms