RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 ACSBG1Q96GR2 724 aa18.77■□□□□ 0.6
CIT-219ENST00000612548 PTCD1O75127 700 aaKnown RBP18.76■□□□□ 0.59
CIT-219ENST00000612548 FKBP5Q13451 457 aaPredicted RBP18.76■□□□□ 0.59
CIT-219ENST00000612548 PHAXQ9H814 394 aaKnown RBP18.76■□□□□ 0.59
CIT-219ENST00000612548 QTRT2Q9H974 415 aaKnown RBP18.76■□□□□ 0.59
CIT-219ENST00000612548 ASAP1Q9ULH1 1129 aa18.76■□□□□ 0.59
CIT-219ENST00000612548 DDX19BQ9UMR2 479 aa18.76■□□□□ 0.59
CIT-219ENST00000612548 DBF4Q9UBU7 674 aaPredicted RBP18.76■□□□□ 0.59
CIT-219ENST00000612548 PROSER3Q2NL68 480 aa18.75■□□□□ 0.59
CIT-219ENST00000612548 ATG3Q9NT62 314 aa18.75■□□□□ 0.59
CIT-219ENST00000612548 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
CIT-219ENST00000612548 F6X3S4 739 aa18.74■□□□□ 0.59
CIT-219ENST00000612548 FBXO41Q8TF61 875 aa18.74■□□□□ 0.59
CIT-219ENST00000612548 DDX21Q9NR30 783 aaKnown RBP eCLIP18.73■□□□□ 0.59
CIT-219ENST00000612548 SLC4A10Q6U841 1118 aa18.72■□□□□ 0.59
CIT-219ENST00000612548 AAMPQ13685 434 aa18.71■□□□□ 0.59
CIT-219ENST00000612548 PDIA6Q15084 440 aa18.71■□□□□ 0.59
CIT-219ENST00000612548 INTS3Q68E01 1043 aaKnown RBP18.71■□□□□ 0.59
CIT-219ENST00000612548 SEPT12Q8IYM1 358 aa18.71■□□□□ 0.59
CIT-219ENST00000612548 ONECUT3O60422 494 aaPredicted RBP18.7■□□□□ 0.58
CIT-219ENST00000612548 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
CIT-219ENST00000612548 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
CIT-219ENST00000612548 N4BP2Q86UW6 1770 aaPredicted RBP18.7■□□□□ 0.58
CIT-219ENST00000612548 MYL6BP14649 208 aa18.7■□□□□ 0.58
CIT-219ENST00000612548 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
CIT-219ENST00000612548 KCNQ2O43526 872 aa18.69■□□□□ 0.58
CIT-219ENST00000612548 ZNF772Q68DY9 489 aaPredicted RBP18.69■□□□□ 0.58
CIT-219ENST00000612548 PXDNLA1KZ92 1463 aa18.68■□□□□ 0.58
CIT-219ENST00000612548 FAM182BQ5T319 152 aa18.68■□□□□ 0.58
CIT-219ENST00000612548 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
CIT-219ENST00000612548 ZBTB7BO15156 539 aaPredicted RBP18.68■□□□□ 0.58
CIT-219ENST00000612548 CCT4P50991 539 aaKnown RBP18.68■□□□□ 0.58
CIT-219ENST00000612548 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
CIT-219ENST00000612548 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
CIT-219ENST00000612548 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
CIT-219ENST00000612548 DNAJC10Q8IXB1 793 aa18.67■□□□□ 0.58
CIT-219ENST00000612548 CHMP4BQ9H444 224 aaKnown RBP18.67■□□□□ 0.58
CIT-219ENST00000612548 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
CIT-219ENST00000612548 ADCY9O60503 1353 aa18.66■□□□□ 0.58
CIT-219ENST00000612548 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
CIT-219ENST00000612548 TJP1Q07157 1748 aa18.66■□□□□ 0.58
CIT-219ENST00000612548 PI4KAP2A4QPH2 592 aa18.66■□□□□ 0.58
CIT-219ENST00000612548 PI4KAP1Q8N8J0 262 aa18.66■□□□□ 0.58
CIT-219ENST00000612548 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
CIT-219ENST00000612548 BRWD3Q6RI45 1802 aa18.66■□□□□ 0.58
CIT-219ENST00000612548 A1BGP04217 495 aa18.65■□□□□ 0.58
CIT-219ENST00000612548 DNAAF4Q8WXU2 420 aa18.65■□□□□ 0.58
CIT-219ENST00000612548 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
CIT-219ENST00000612548 LRP10Q7Z4F1 713 aa18.65■□□□□ 0.58
CIT-219ENST00000612548 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
CIT-219ENST00000612548 TEX13AQ9BXU3 409 aaPredicted RBP18.65■□□□□ 0.58
CIT-219ENST00000612548 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
CIT-219ENST00000612548 PALLDQ8WX93 1383 aa18.64■□□□□ 0.58
CIT-219ENST00000612548 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
CIT-219ENST00000612548 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
CIT-219ENST00000612548 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
CIT-219ENST00000612548 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
CIT-219ENST00000612548 COPS6Q7L5N1 327 aa18.64■□□□□ 0.57
CIT-219ENST00000612548 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
CIT-219ENST00000612548 BTAF1O14981 1849 aa18.64■□□□□ 0.57
CIT-219ENST00000612548 SBF2Q86WG5 1849 aa18.64■□□□□ 0.57
CIT-219ENST00000612548 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
CIT-219ENST00000612548 MAP3K2Q9Y2U5 619 aa18.63■□□□□ 0.57
CIT-219ENST00000612548 STARD3NLO95772 234 aa18.63■□□□□ 0.57
CIT-219ENST00000612548 IGHDP01880 384 aa18.63■□□□□ 0.57
CIT-219ENST00000612548 KSR2Q6VAB6 950 aa18.63■□□□□ 0.57
CIT-219ENST00000612548 CENPQQ7L2Z9 268 aaPredicted RBP18.63■□□□□ 0.57
CIT-219ENST00000612548 PTF1AQ7RTS3 328 aa18.63■□□□□ 0.57
CIT-219ENST00000612548 MEIS3Q99687 375 aa18.63■□□□□ 0.57
CIT-219ENST00000612548 SMARCC1Q92922 1105 aaPredicted RBP18.62■□□□□ 0.57
CIT-219ENST00000612548 ATP10DQ9P241 1426 aa18.61■□□□□ 0.57
CIT-219ENST00000612548 SRCIN1Q9C0H9 1055 aa18.61■□□□□ 0.57
CIT-219ENST00000612548 EP400Q96L91 3159 aa18.61■□□□□ 0.57
CIT-219ENST00000612548 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
CIT-219ENST00000612548 SIK1P57059 783 aa18.6■□□□□ 0.57
CIT-219ENST00000612548 BEND3Q5T5X7 828 aa18.6■□□□□ 0.57
CIT-219ENST00000612548 RIC3Q7Z5B4 369 aa18.6■□□□□ 0.57
CIT-219ENST00000612548 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
CIT-219ENST00000612548 CYP19A1P11511 503 aaPredicted RBP18.6■□□□□ 0.57
CIT-219ENST00000612548 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
CIT-219ENST00000612548 CICQ96RK0 1608 aaPredicted RBP18.59■□□□□ 0.57
CIT-219ENST00000612548 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
CIT-219ENST00000612548 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.57
CIT-219ENST00000612548 RWDD1Q9H446 243 aaPredicted RBP18.58■□□□□ 0.57
CIT-219ENST00000612548 ZNF330Q9Y3S2 320 aaPredicted RBP18.58■□□□□ 0.57
CIT-219ENST00000612548 TTLL7Q6ZT98 887 aa18.58■□□□□ 0.56
CIT-219ENST00000612548 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
CIT-219ENST00000612548 ITPK1Q13572 414 aa18.57■□□□□ 0.56
CIT-219ENST00000612548 ZBTB1Q9Y2K1 713 aa18.57■□□□□ 0.56
CIT-219ENST00000612548 RXRBP28702 533 aa18.56■□□□□ 0.56
CIT-219ENST00000612548 HDAC1Q13547 482 aaPredicted RBP18.56■□□□□ 0.56
CIT-219ENST00000612548 ZNF831Q5JPB2 1677 aa18.56■□□□□ 0.56
CIT-219ENST00000612548 COL5A3P25940 1745 aaPredicted RBP18.56■□□□□ 0.56
CIT-219ENST00000612548 GNAI3P08754 354 aa18.55■□□□□ 0.56
CIT-219ENST00000612548 CWF19L2Q2TBE0 894 aaKnown RBP18.55■□□□□ 0.56
CIT-219ENST00000612548 PLBD2Q8NHP8 589 aa18.55■□□□□ 0.56
CIT-219ENST00000612548 MYD88Q99836 296 aa18.55■□□□□ 0.56
CIT-219ENST00000612548 METTL22Q9BUU2 404 aaPredicted RBP18.55■□□□□ 0.56
CIT-219ENST00000612548 USP44Q9H0E7 712 aa18.55■□□□□ 0.56
CIT-219ENST00000612548 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms