RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 NARFQ9UHQ1 456 aa22.65■■□□□ 1.22
TVP23A-210ENST00000612195 TOMM70O94826 608 aa22.64■■□□□ 1.21
TVP23A-210ENST00000612195 ZBTB1Q9Y2K1 713 aa22.64■■□□□ 1.21
TVP23A-210ENST00000612195 NFIXQ14938 502 aa22.63■■□□□ 1.21
TVP23A-210ENST00000612195 COL15A1P39059 1388 aa22.63■■□□□ 1.21
TVP23A-210ENST00000612195 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
TVP23A-210ENST00000612195 VSIG10Q8N0Z9 540 aa22.62■■□□□ 1.21
TVP23A-210ENST00000612195 BCL2L12Q9HB09 334 aa22.61■■□□□ 1.21
TVP23A-210ENST00000612195 AFDNP55196 1824 aaKnown RBP22.61■■□□□ 1.21
TVP23A-210ENST00000612195 UBR2Q8IWV8 1755 aa22.59■■□□□ 1.21
TVP23A-210ENST00000612195 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
TVP23A-210ENST00000612195 CANXP27824 592 aaKnown RBP22.59■■□□□ 1.21
TVP23A-210ENST00000612195 APLP1P51693 650 aa22.59■■□□□ 1.21
TVP23A-210ENST00000612195 IFFO2Q5TF58 517 aa22.59■■□□□ 1.21
TVP23A-210ENST00000612195 RNF181Q9P0P0 153 aa22.59■■□□□ 1.21
TVP23A-210ENST00000612195 COL3A1P02461 1466 aaPredicted RBP22.59■■□□□ 1.21
TVP23A-210ENST00000612195 SERPINB2P05120 415 aa22.58■■□□□ 1.21
TVP23A-210ENST00000612195 TTC5Q8N0Z6 440 aa22.58■■□□□ 1.21
TVP23A-210ENST00000612195 SBF1O95248 1867 aa22.58■■□□□ 1.2
TVP23A-210ENST00000612195 STARD3NLO95772 234 aa22.57■■□□□ 1.2
TVP23A-210ENST00000612195 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
TVP23A-210ENST00000612195 NRXN2Q9P2S2 1712 aa22.57■■□□□ 1.2
TVP23A-210ENST00000612195 NPC1L1Q9UHC9 1359 aa22.56■■□□□ 1.2
TVP23A-210ENST00000612195 GNAT3A8MTJ3 354 aa22.55■■□□□ 1.2
TVP23A-210ENST00000612195 EIF5P55010 431 aaKnown RBP22.55■■□□□ 1.2
TVP23A-210ENST00000612195 TEFQ10587 303 aa22.55■■□□□ 1.2
TVP23A-210ENST00000612195 GAS2L2Q8NHY3 880 aa22.55■■□□□ 1.2
TVP23A-210ENST00000612195 ZNF496Q96IT1 587 aaPredicted RBP22.55■■□□□ 1.2
TVP23A-210ENST00000612195 KDM2BQ8NHM5 1336 aa22.55■■□□□ 1.2
TVP23A-210ENST00000612195 ZNF790Q6PG37 636 aa22.54■■□□□ 1.2
TVP23A-210ENST00000612195 BICDL1Q6ZP65 573 aa22.54■■□□□ 1.2
TVP23A-210ENST00000612195 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
TVP23A-210ENST00000612195 RBM46Q8TBY0 533 aaKnown RBP22.54■■□□□ 1.2
TVP23A-210ENST00000612195 RASSF7Q02833 373 aa22.53■■□□□ 1.2
TVP23A-210ENST00000612195 C2CD5Q86YS7 1000 aa22.53■■□□□ 1.2
TVP23A-210ENST00000612195 DNAJC5GQ8N7S2 189 aa22.53■■□□□ 1.2
TVP23A-210ENST00000612195 RRAGCQ9HB90 399 aa22.53■■□□□ 1.2
TVP23A-210ENST00000612195 HEG1Q9ULI3 1381 aa22.52■■□□□ 1.2
TVP23A-210ENST00000612195 A0A087WZG4 1122 aa22.52■■□□□ 1.2
TVP23A-210ENST00000612195 CARMIL3Q8ND23 1372 aa22.51■■□□□ 1.19
TVP23A-210ENST00000612195 SIPA1L3O60292 1781 aaPredicted RBP22.51■■□□□ 1.19
TVP23A-210ENST00000612195 TTLL6Q8N841 843 aa22.51■■□□□ 1.19
TVP23A-210ENST00000612195 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
TVP23A-210ENST00000612195 DLEC1Q9Y238 1755 aa22.5■■□□□ 1.19
TVP23A-210ENST00000612195 H0YIN7 160 aa22.5■■□□□ 1.19
TVP23A-210ENST00000612195 PHACTR3Q96KR7 559 aa22.5■■□□□ 1.19
TVP23A-210ENST00000612195 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
TVP23A-210ENST00000612195 PRELPP51888 382 aa22.49■■□□□ 1.19
TVP23A-210ENST00000612195 TBC1D9BQ66K14 1250 aa22.49■■□□□ 1.19
TVP23A-210ENST00000612195 TBC1D2BQ9UPU7 963 aa22.49■■□□□ 1.19
TVP23A-210ENST00000612195 LMNB1P20700 586 aa22.48■■□□□ 1.19
TVP23A-210ENST00000612195 FSTL1Q12841 308 aa22.48■■□□□ 1.19
TVP23A-210ENST00000612195 KCNQ3O43525 872 aa22.47■■□□□ 1.19
TVP23A-210ENST00000612195 IL6STP40189 918 aaPredicted RBP22.47■■□□□ 1.19
TVP23A-210ENST00000612195 FMNL2Q96PY5 1086 aa22.47■■□□□ 1.19
TVP23A-210ENST00000612195 CEMIPQ8WUJ3 1361 aa22.47■■□□□ 1.19
TVP23A-210ENST00000612195 TNRC6CQ9HCJ0 1690 aaKnown RBP22.46■■□□□ 1.19
TVP23A-210ENST00000612195 WDR90Q96KV7 1748 aa22.46■■□□□ 1.19
TVP23A-210ENST00000612195 A1BGP04217 495 aa22.46■■□□□ 1.19
TVP23A-210ENST00000612195 PRKAR2BP31323 418 aa22.46■■□□□ 1.19
TVP23A-210ENST00000612195 HTRA3P83110 453 aa22.46■■□□□ 1.19
TVP23A-210ENST00000612195 RSPH6AQ9H0K4 717 aa22.46■■□□□ 1.19
TVP23A-210ENST00000612195 ZC3H4Q9UPT8 1303 aaKnown RBP22.46■■□□□ 1.19
TVP23A-210ENST00000612195 ANKRD31Q8N7Z5 1873 aa22.45■■□□□ 1.19
TVP23A-210ENST00000612195 BTBD11A6QL63 1104 aa22.45■■□□□ 1.18
TVP23A-210ENST00000612195 CCDC24Q8N4L8 307 aa22.45■■□□□ 1.18
TVP23A-210ENST00000612195 CFAP53Q96M91 514 aa22.45■■□□□ 1.18
TVP23A-210ENST00000612195 CCDC88AQ3V6T2 1871 aa22.45■■□□□ 1.18
TVP23A-210ENST00000612195 NFKBIEO00221 500 aa22.44■■□□□ 1.18
TVP23A-210ENST00000612195 PCNTO95613 3336 aa22.44■■□□□ 1.18
TVP23A-210ENST00000612195 SCN7AQ01118 1682 aa22.44■■□□□ 1.18
TVP23A-210ENST00000612195 PRR5LQ6MZQ0 368 aa22.44■■□□□ 1.18
TVP23A-210ENST00000612195 ZNF622Q969S3 477 aaKnown RBP eCLIP22.44■■□□□ 1.18
TVP23A-210ENST00000612195 BRIP1Q9BX63 1249 aa22.44■■□□□ 1.18
TVP23A-210ENST00000612195 PDE6BP35913 854 aa22.43■■□□□ 1.18
TVP23A-210ENST00000612195 GLTPD2A6NH11 291 aa22.42■■□□□ 1.18
TVP23A-210ENST00000612195 CAMTA2O94983 1202 aa22.42■■□□□ 1.18
TVP23A-210ENST00000612195 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
TVP23A-210ENST00000612195 SETDB2Q96T68 719 aa22.41■■□□□ 1.18
TVP23A-210ENST00000612195 ZNF219Q9P2Y4 722 aaPredicted RBP22.41■■□□□ 1.18
TVP23A-210ENST00000612195 PDZRN3Q9UPQ7 1066 aa22.41■■□□□ 1.18
TVP23A-210ENST00000612195 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
TVP23A-210ENST00000612195 C21orf2O43822 256 aa22.4■■□□□ 1.18
TVP23A-210ENST00000612195 VEGFAP15692 232 aaPredicted RBP22.4■■□□□ 1.18
TVP23A-210ENST00000612195 SMC1BQ8NDV3 1235 aa22.4■■□□□ 1.18
TVP23A-210ENST00000612195 USP16Q9Y5T5 823 aa22.4■■□□□ 1.18
TVP23A-210ENST00000612195 U2AF1L5P0DN76 240 aaPredicted RBP22.39■■□□□ 1.17
TVP23A-210ENST00000612195 PIP4K2AP48426 406 aaPredicted RBP22.39■■□□□ 1.17
TVP23A-210ENST00000612195 U2AF1Q01081 240 aaKnown RBP eCLIP22.39■■□□□ 1.17
TVP23A-210ENST00000612195 MCM10Q7L590 875 aa22.39■■□□□ 1.17
TVP23A-210ENST00000612195 CNBD1Q8NA66 436 aa22.39■■□□□ 1.17
TVP23A-210ENST00000612195 KLRG1Q96E93 195 aa22.39■■□□□ 1.17
TVP23A-210ENST00000612195 COL11A2P13942 1736 aaPredicted RBP22.39■■□□□ 1.17
TVP23A-210ENST00000612195 TIAM2Q8IVF5 1701 aa22.39■■□□□ 1.17
TVP23A-210ENST00000612195 PRAMEF22A3QJZ6 481 aa22.38■■□□□ 1.17
TVP23A-210ENST00000612195 PPP2R1AP30153 589 aa22.38■■□□□ 1.17
TVP23A-210ENST00000612195 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
TVP23A-210ENST00000612195 NPHP1O15259 732 aa22.37■■□□□ 1.17
TVP23A-210ENST00000612195 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
TVP23A-210ENST00000612195 BCORQ6W2J9 1755 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms