RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 USP21Q9UK80 565 aa15.54■□□□□ 0.08
CBWD1-220ENST00000612045 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
CBWD1-220ENST00000612045 HDAC1Q13547 482 aaPredicted RBP15.53■□□□□ 0.08
CBWD1-220ENST00000612045 PDIA6Q15084 440 aa15.53■□□□□ 0.08
CBWD1-220ENST00000612045 PIGBQ92521 554 aa15.53■□□□□ 0.08
CBWD1-220ENST00000612045 DDX21Q9NR30 783 aaKnown RBP eCLIP15.53■□□□□ 0.08
CBWD1-220ENST00000612045 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
CBWD1-220ENST00000612045 KCPQ6ZWJ8 1503 aa15.53■□□□□ 0.08
CBWD1-220ENST00000612045 MEX3CQ5U5Q3 659 aaKnown RBP15.52■□□□□ 0.08
CBWD1-220ENST00000612045 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
CBWD1-220ENST00000612045 PXDNLA1KZ92 1463 aa15.52■□□□□ 0.08
CBWD1-220ENST00000612045 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.52■□□□□ 0.07
CBWD1-220ENST00000612045 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.07
CBWD1-220ENST00000612045 C1orf115Q9H7X2 142 aa15.52■□□□□ 0.07
CBWD1-220ENST00000612045 ITGB4P16144 1822 aa15.52■□□□□ 0.07
CBWD1-220ENST00000612045 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
CBWD1-220ENST00000612045 PTCD1O75127 700 aaKnown RBP15.5■□□□□ 0.07
CBWD1-220ENST00000612045 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
CBWD1-220ENST00000612045 MARCH10Q8NA82 808 aaPredicted RBP15.5■□□□□ 0.07
CBWD1-220ENST00000612045 BCL9O00512 1426 aa15.5■□□□□ 0.07
CBWD1-220ENST00000612045 LAMB4A4D0S4 1761 aa15.5■□□□□ 0.07
CBWD1-220ENST00000612045 N4BP2Q86UW6 1770 aaPredicted RBP15.5■□□□□ 0.07
CBWD1-220ENST00000612045 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
CBWD1-220ENST00000612045 MEIS3Q99687 375 aa15.5■□□□□ 0.07
CBWD1-220ENST00000612045 ASAP1Q9ULH1 1129 aa15.5■□□□□ 0.07
CBWD1-220ENST00000612045 DNAAF4Q8WXU2 420 aa15.49■□□□□ 0.07
CBWD1-220ENST00000612045 ATG3Q9NT62 314 aa15.49■□□□□ 0.07
CBWD1-220ENST00000612045 KAT6BQ8WYB5 2073 aa15.49■□□□□ 0.07
CBWD1-220ENST00000612045 ADCY9O60503 1353 aa15.48■□□□□ 0.07
CBWD1-220ENST00000612045 MYL6BP14649 208 aa15.48■□□□□ 0.07
CBWD1-220ENST00000612045 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
CBWD1-220ENST00000612045 AFF2P51816 1311 aa15.48■□□□□ 0.07
CBWD1-220ENST00000612045 PRIM1P49642 420 aaKnown RBP15.47■□□□□ 0.07
CBWD1-220ENST00000612045 KSR2Q6VAB6 950 aa15.47■□□□□ 0.07
CBWD1-220ENST00000612045 LRP10Q7Z4F1 713 aa15.47■□□□□ 0.07
CBWD1-220ENST00000612045 SYTL4Q96C24 671 aaPredicted RBP15.47■□□□□ 0.07
CBWD1-220ENST00000612045 ERBB4Q15303 1308 aa15.47■□□□□ 0.07
CBWD1-220ENST00000612045 DDX58O95786 925 aaKnown RBP15.47■□□□□ 0.07
CBWD1-220ENST00000612045 SIRT2Q8IXJ6 389 aa15.47■□□□□ 0.07
CBWD1-220ENST00000612045 SRCIN1Q9C0H9 1055 aa15.47■□□□□ 0.07
CBWD1-220ENST00000612045 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
CBWD1-220ENST00000612045 ATP10DQ9P241 1426 aa15.46■□□□□ 0.07
CBWD1-220ENST00000612045 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
CBWD1-220ENST00000612045 BEND3Q5T5X7 828 aa15.46■□□□□ 0.07
CBWD1-220ENST00000612045 VSIG10Q8N0Z9 540 aa15.46■□□□□ 0.07
CBWD1-220ENST00000612045 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.07
CBWD1-220ENST00000612045 GNAI3P08754 354 aa15.45■□□□□ 0.06
CBWD1-220ENST00000612045 SMC5Q8IY18 1101 aa15.45■□□□□ 0.06
CBWD1-220ENST00000612045 XAGE3Q8WTP9 111 aa15.45■□□□□ 0.06
CBWD1-220ENST00000612045 PIP4K2AP48426 406 aaPredicted RBP15.45■□□□□ 0.06
CBWD1-220ENST00000612045 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
CBWD1-220ENST00000612045 GJD4Q96KN9 370 aaPredicted RBP15.45■□□□□ 0.06
CBWD1-220ENST00000612045 GNAI2P04899 355 aa15.44■□□□□ 0.06
CBWD1-220ENST00000612045 CEP85Q6P2H3 762 aa15.44■□□□□ 0.06
CBWD1-220ENST00000612045 RPAP2Q8IXW5 612 aaPredicted RBP15.44■□□□□ 0.06
CBWD1-220ENST00000612045 ANKRD44Q8N8A2 993 aa15.44■□□□□ 0.06
CBWD1-220ENST00000612045 ACSBG1Q96GR2 724 aa15.44■□□□□ 0.06
CBWD1-220ENST00000612045 TEX13AQ9BXU3 409 aaPredicted RBP15.44■□□□□ 0.06
CBWD1-220ENST00000612045 USP44Q9H0E7 712 aa15.44■□□□□ 0.06
CBWD1-220ENST00000612045 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
CBWD1-220ENST00000612045 A0A0G2JS52 829 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 MYT1Q01538 1121 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 NBPF14Q5TI25 921 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
CBWD1-220ENST00000612045 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
CBWD1-220ENST00000612045 THSD7AQ9UPZ6 1657 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 ATRNO75882 1429 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 A1BGP04217 495 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 RGS3P49796 1198 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 RIC3Q7Z5B4 369 aa15.43■□□□□ 0.06
CBWD1-220ENST00000612045 TRPC5Q9UL62 973 aaPredicted RBP15.43■□□□□ 0.06
CBWD1-220ENST00000612045 ANKRD13DQ6ZTN6 518 aa15.42■□□□□ 0.06
CBWD1-220ENST00000612045 DNAJC10Q8IXB1 793 aa15.42■□□□□ 0.06
CBWD1-220ENST00000612045 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
CBWD1-220ENST00000612045 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
CBWD1-220ENST00000612045 SLC4A9Q96Q91 983 aa15.41■□□□□ 0.06
CBWD1-220ENST00000612045 STARD3NLO95772 234 aa15.4■□□□□ 0.06
CBWD1-220ENST00000612045 UBTFL1P0CB47 393 aaPredicted RBP15.4■□□□□ 0.06
CBWD1-220ENST00000612045 LINS1Q8NG48 757 aa15.4■□□□□ 0.06
CBWD1-220ENST00000612045 LRRFIP2Q9Y608 721 aaKnown RBP15.4■□□□□ 0.06
CBWD1-220ENST00000612045 ONECUT3O60422 494 aaPredicted RBP15.39■□□□□ 0.05
CBWD1-220ENST00000612045 NBPF7P0C2Y1 421 aaPredicted RBP15.39■□□□□ 0.05
CBWD1-220ENST00000612045 NUCB1Q02818 461 aa15.39■□□□□ 0.05
CBWD1-220ENST00000612045 CWF19L2Q2TBE0 894 aaKnown RBP15.39■□□□□ 0.05
CBWD1-220ENST00000612045 METTL22Q9BUU2 404 aaPredicted RBP15.39■□□□□ 0.05
CBWD1-220ENST00000612045 KCNQ2O43526 872 aa15.38■□□□□ 0.05
CBWD1-220ENST00000612045 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
CBWD1-220ENST00000612045 PLBD2Q8NHP8 589 aa15.38■□□□□ 0.05
CBWD1-220ENST00000612045 DCTPP1Q9H773 170 aa15.38■□□□□ 0.05
CBWD1-220ENST00000612045 QTRT2Q9H974 415 aaKnown RBP15.38■□□□□ 0.05
CBWD1-220ENST00000612045 HMMRO75330 724 aa15.38■□□□□ 0.05
CBWD1-220ENST00000612045 IGKV5-2P06315 115 aa15.38■□□□□ 0.05
CBWD1-220ENST00000612045 MYD88Q99836 296 aa15.38■□□□□ 0.05
CBWD1-220ENST00000612045 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
CBWD1-220ENST00000612045 CYP19A1P11511 503 aaPredicted RBP15.37■□□□□ 0.05
CBWD1-220ENST00000612045 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
CBWD1-220ENST00000612045 C9orf78Q9NZ63 289 aaPredicted RBP15.37■□□□□ 0.05
CBWD1-220ENST00000612045 ARFGEF2Q9Y6D5 1785 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms