RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
HMGB1P24-201ENST00000611897 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
HMGB1P24-201ENST00000611897 CYP19A1P11511 503 aaPredicted RBP18.04■□□□□ 0.48
HMGB1P24-201ENST00000611897 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
HMGB1P24-201ENST00000611897 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
HMGB1P24-201ENST00000611897 CANXP27824 592 aaKnown RBP18.03■□□□□ 0.48
HMGB1P24-201ENST00000611897 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
HMGB1P24-201ENST00000611897 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.48
HMGB1P24-201ENST00000611897 BICDL1Q6ZP65 573 aa18.02■□□□□ 0.48
HMGB1P24-201ENST00000611897 C16orf71Q8IYS4 520 aaPredicted RBP18.02■□□□□ 0.48
HMGB1P24-201ENST00000611897 TOMM70O94826 608 aa18.01■□□□□ 0.47
HMGB1P24-201ENST00000611897 NFIXQ14938 502 aa18.01■□□□□ 0.47
HMGB1P24-201ENST00000611897 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
HMGB1P24-201ENST00000611897 TM4SF1P30408 202 aa18■□□□□ 0.47
HMGB1P24-201ENST00000611897 RASSF7Q02833 373 aa18■□□□□ 0.47
HMGB1P24-201ENST00000611897 TEFQ10587 303 aa18■□□□□ 0.47
HMGB1P24-201ENST00000611897 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
HMGB1P24-201ENST00000611897 SBF1O95248 1867 aa17.99■□□□□ 0.47
HMGB1P24-201ENST00000611897 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
HMGB1P24-201ENST00000611897 SERPINB2P05120 415 aa17.98■□□□□ 0.47
HMGB1P24-201ENST00000611897 APLP1P51693 650 aa17.98■□□□□ 0.47
HMGB1P24-201ENST00000611897 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
HMGB1P24-201ENST00000611897 CARMIL3Q8ND23 1372 aa17.97■□□□□ 0.47
HMGB1P24-201ENST00000611897 BCL2L12Q9HB09 334 aa17.97■□□□□ 0.47
HMGB1P24-201ENST00000611897 NRXN2Q9P2S2 1712 aa17.97■□□□□ 0.47
HMGB1P24-201ENST00000611897 DLEC1Q9Y238 1755 aa17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 STARD3NLO95772 234 aa17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 ZNF496Q96IT1 587 aaPredicted RBP17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
HMGB1P24-201ENST00000611897 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
HMGB1P24-201ENST00000611897 SIPA1L3O60292 1781 aaPredicted RBP17.95■□□□□ 0.46
HMGB1P24-201ENST00000611897 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
HMGB1P24-201ENST00000611897 VSIG10Q8N0Z9 540 aa17.95■□□□□ 0.46
HMGB1P24-201ENST00000611897 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
HMGB1P24-201ENST00000611897 HEG1Q9ULI3 1381 aa17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 CCDC24Q8N4L8 307 aa17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 RRAGCQ9HB90 399 aa17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 TIAM2Q8IVF5 1701 aa17.94■□□□□ 0.46
HMGB1P24-201ENST00000611897 NPHP1O15259 732 aa17.93■□□□□ 0.46
HMGB1P24-201ENST00000611897 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
HMGB1P24-201ENST00000611897 HTRA3P83110 453 aa17.93■□□□□ 0.46
HMGB1P24-201ENST00000611897 ZNF790Q6PG37 636 aa17.93■□□□□ 0.46
HMGB1P24-201ENST00000611897 RBM46Q8TBY0 533 aaKnown RBP17.93■□□□□ 0.46
HMGB1P24-201ENST00000611897 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 A0A087WZG4 1122 aa17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 H0YIN7 160 aa17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 EIF5P55010 431 aaKnown RBP17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
HMGB1P24-201ENST00000611897 NPC1L1Q9UHC9 1359 aa17.91■□□□□ 0.46
HMGB1P24-201ENST00000611897 ZNF622Q969S3 477 aaKnown RBP eCLIP17.91■□□□□ 0.46
HMGB1P24-201ENST00000611897 COL11A2P13942 1736 aaPredicted RBP17.91■□□□□ 0.46
HMGB1P24-201ENST00000611897 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
HMGB1P24-201ENST00000611897 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
HMGB1P24-201ENST00000611897 KCNQ3O43525 872 aa17.89■□□□□ 0.45
HMGB1P24-201ENST00000611897 A1BGP04217 495 aa17.89■□□□□ 0.45
HMGB1P24-201ENST00000611897 LMNB1P20700 586 aa17.89■□□□□ 0.45
HMGB1P24-201ENST00000611897 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
HMGB1P24-201ENST00000611897 BTBD11A6QL63 1104 aa17.88■□□□□ 0.45
HMGB1P24-201ENST00000611897 TEX13AQ9BXU3 409 aaPredicted RBP17.88■□□□□ 0.45
HMGB1P24-201ENST00000611897 BCORQ6W2J9 1755 aa17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 U2AF1L5P0DN76 240 aaPredicted RBP17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 PRELPP51888 382 aa17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 U2AF1Q01081 240 aaKnown RBP eCLIP17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 PRR5LQ6MZQ0 368 aa17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
HMGB1P24-201ENST00000611897 NFKBIEO00221 500 aa17.86■□□□□ 0.45
HMGB1P24-201ENST00000611897 C21orf2O43822 256 aa17.86■□□□□ 0.45
HMGB1P24-201ENST00000611897 FSTL1Q12841 308 aa17.86■□□□□ 0.45
HMGB1P24-201ENST00000611897 CNBD1Q8NA66 436 aa17.86■□□□□ 0.45
HMGB1P24-201ENST00000611897 PDE6BP35913 854 aa17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 MCM10Q7L590 875 aa17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 DZIP3Q86Y13 1208 aaKnown RBP17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 DNAJC5GQ8N7S2 189 aa17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 SMC1BQ8NDV3 1235 aa17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 CEMIPQ8WUJ3 1361 aa17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
HMGB1P24-201ENST00000611897 ZC3H4Q9UPT8 1303 aaKnown RBP17.84■□□□□ 0.45
HMGB1P24-201ENST00000611897 PRAMEF22A3QJZ6 481 aa17.84■□□□□ 0.45
HMGB1P24-201ENST00000611897 BRIP1Q9BX63 1249 aa17.84■□□□□ 0.45
HMGB1P24-201ENST00000611897 GLTPD2A6NH11 291 aa17.83■□□□□ 0.44
HMGB1P24-201ENST00000611897 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
HMGB1P24-201ENST00000611897 ST5P78524 1137 aa17.83■□□□□ 0.44
HMGB1P24-201ENST00000611897 DCTN1Q14203 1278 aa17.83■□□□□ 0.44
HMGB1P24-201ENST00000611897 FER1L6Q2WGJ9 1857 aa17.82■□□□□ 0.44
HMGB1P24-201ENST00000611897 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
HMGB1P24-201ENST00000611897 VEGFAP15692 232 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms