RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 DNTTIP2Q5QJE6 756 aaKnown RBP18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 RASEFQ8IZ41 740 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 TMEM87AQ8NBN3 555 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 TSC1Q92574 1164 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 NALCNQ8IZF0 1738 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 SOS1Q07889 1333 aaPredicted RBP18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 ADCY5O95622 1261 aa18.24■□□□□ 0.51
PCDHGB1-202ENST00000611598 AK2P54819 239 aa18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 TTC14Q96N46 770 aa18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 RAD50Q92878 1312 aa18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 UBTFL1P0CB47 393 aaPredicted RBP18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 CPA1P15085 419 aa18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 FAM184AQ8NB25 1140 aa18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 PI4K2BQ8TCG2 481 aa18.23■□□□□ 0.51
PCDHGB1-202ENST00000611598 KDRP35968 1356 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 SGSM2O43147 1006 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 AOX1Q06278 1338 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 FIBPO43427 364 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 SURF6O75683 361 aaKnown RBP18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 SYT1P21579 422 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 UVSSAQ2YD98 709 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 PIBF1Q8WXW3 757 aa18.22■□□□□ 0.51
PCDHGB1-202ENST00000611598 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 SSH3Q8TE77 659 aa18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 STX6O43752 255 aa18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 LARGE1O95461 756 aa18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 MYRIPQ8NFW9 859 aa18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
PCDHGB1-202ENST00000611598 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.5
PCDHGB1-202ENST00000611598 NOLC1Q14978 699 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCDHGB1-202ENST00000611598 FLT4P35916 1363 aa18.2■□□□□ 0.5
PCDHGB1-202ENST00000611598 RHPN1Q8TCX5 695 aa18.2■□□□□ 0.5
PCDHGB1-202ENST00000611598 SPG7Q9UQ90 795 aa18.2■□□□□ 0.5
PCDHGB1-202ENST00000611598 AGLP35573 1532 aa18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 TOPAZ1Q8N9V7 1692 aa18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 AMPHP49418 695 aa18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 UBE2HP62256 183 aa18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 FMN2Q9NZ56 1722 aa18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 GIMAP6Q6P9H5 292 aa18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 CWC27Q6UX04 472 aaKnown RBP18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 SBNO1A3KN83 1393 aa18.19■□□□□ 0.5
PCDHGB1-202ENST00000611598 F13A1P00488 732 aa18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 LIMCH1Q9UPQ0 1083 aa18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 AP5Z1O43299 807 aa18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 EPB41L2O43491 1005 aaKnown RBP18.18■□□□□ 0.5
PCDHGB1-202ENST00000611598 PRDM4Q9UKN5 801 aa18.17■□□□□ 0.5
PCDHGB1-202ENST00000611598 SMC3Q9UQE7 1217 aa18.17■□□□□ 0.5
PCDHGB1-202ENST00000611598 SRGAP3O43295 1099 aa18.17■□□□□ 0.5
PCDHGB1-202ENST00000611598 POLA2Q14181 598 aa18.17■□□□□ 0.5
PCDHGB1-202ENST00000611598 ZNF710Q8N1W2 664 aa18.17■□□□□ 0.5
PCDHGB1-202ENST00000611598 FUCA2Q9BTY2 467 aa18.17■□□□□ 0.5
PCDHGB1-202ENST00000611598 LRRC37A3O60309 1634 aa18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 KDM4AO75164 1064 aa18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 CASTP20810 708 aaKnown RBP18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 DNM1Q05193 864 aaKnown RBP18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 RAB11FIP3O75154 756 aa18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.16■□□□□ 0.5
PCDHGB1-202ENST00000611598 ADAMTS13Q76LX8 1427 aa18.15■□□□□ 0.5
PCDHGB1-202ENST00000611598 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
PCDHGB1-202ENST00000611598 ADCK5Q3MIX3 580 aa18.15■□□□□ 0.5
PCDHGB1-202ENST00000611598 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
PCDHGB1-202ENST00000611598 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
PCDHGB1-202ENST00000611598 LETM1O95202 739 aaPredicted RBP18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 GJB2P29033 226 aa18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 DDX54Q8TDD1 881 aaKnown RBP18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 HYPKQ9NX55 129 aa18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 PTH1RQ03431 593 aa18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 KIF1BPQ96EK5 621 aa18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 PRIMPOLQ96LW4 560 aa18.14■□□□□ 0.49
PCDHGB1-202ENST00000611598 SPTLC3Q9NUV7 552 aa18.13■□□□□ 0.49
PCDHGB1-202ENST00000611598 MTMR6Q9Y217 621 aa18.13■□□□□ 0.49
PCDHGB1-202ENST00000611598 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
PCDHGB1-202ENST00000611598 ST3GAL1Q11201 340 aa18.13■□□□□ 0.49
PCDHGB1-202ENST00000611598 TAF7Q15545 349 aaPredicted RBP18.13■□□□□ 0.49
PCDHGB1-202ENST00000611598 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 KCNF1Q9H3M0 494 aa18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 TMEM2Q9UHN6 1383 aa18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 TTC21AQ8NDW8 1320 aa18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 MAP3K5Q99683 1374 aa18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 EIF2S2P20042 333 aaKnown RBP18.12■□□□□ 0.49
PCDHGB1-202ENST00000611598 HMGN5P82970 282 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms