RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 ZBTB1Q9Y2K1 713 aa29.04■■■□□ 2.24
CBWD3-207ENST00000611426 STARD3NLO95772 234 aa29.02■■■□□ 2.24
CBWD3-207ENST00000611426 U2AF1L5P0DN76 240 aaPredicted RBP29.02■■■□□ 2.24
CBWD3-207ENST00000611426 TM4SF1P30408 202 aa29.02■■■□□ 2.24
CBWD3-207ENST00000611426 U2AF1Q01081 240 aaKnown RBP eCLIP29.02■■■□□ 2.24
CBWD3-207ENST00000611426 ZNF790Q6PG37 636 aa29.02■■■□□ 2.24
CBWD3-207ENST00000611426 NARFQ9UHQ1 456 aa29.02■■■□□ 2.24
CBWD3-207ENST00000611426 UBR2Q8IWV8 1755 aa29.02■■■□□ 2.24
CBWD3-207ENST00000611426 COL15A1P39059 1388 aa29.01■■■□□ 2.23
CBWD3-207ENST00000611426 CANXP27824 592 aaKnown RBP29.01■■■□□ 2.23
CBWD3-207ENST00000611426 ZNF496Q96IT1 587 aaPredicted RBP29.01■■■□□ 2.23
CBWD3-207ENST00000611426 POLRMTO00411 1230 aaKnown RBP29■■■□□ 2.23
CBWD3-207ENST00000611426 FCHSD2O94868 740 aa29■■■□□ 2.23
CBWD3-207ENST00000611426 GPBP1L1Q9HC44 474 aaPredicted RBP29■■■□□ 2.23
CBWD3-207ENST00000611426 ADCY9O60503 1353 aa28.99■■■□□ 2.23
CBWD3-207ENST00000611426 TEX13AQ9BXU3 409 aaPredicted RBP28.99■■■□□ 2.23
CBWD3-207ENST00000611426 SENP3-EIF4A1A0A087X0R7 540 aa28.98■■■□□ 2.23
CBWD3-207ENST00000611426 KCNA3P22001 575 aa28.98■■■□□ 2.23
CBWD3-207ENST00000611426 ZNF526Q8TF50 670 aaPredicted RBP28.98■■■□□ 2.23
CBWD3-207ENST00000611426 ARHGAP27Q6ZUM4 889 aa28.97■■■□□ 2.23
CBWD3-207ENST00000611426 PIM2Q9P1W9 311 aa28.97■■■□□ 2.23
CBWD3-207ENST00000611426 CEMIPQ8WUJ3 1361 aa28.97■■■□□ 2.23
CBWD3-207ENST00000611426 HEG1Q9ULI3 1381 aa28.97■■■□□ 2.23
CBWD3-207ENST00000611426 SIPA1L3O60292 1781 aaPredicted RBP28.97■■■□□ 2.23
CBWD3-207ENST00000611426 BTBD11A6QL63 1104 aa28.96■■■□□ 2.23
CBWD3-207ENST00000611426 DDX10Q13206 875 aaKnown RBP28.96■■■□□ 2.23
CBWD3-207ENST00000611426 FMNL2Q96PY5 1086 aa28.96■■■□□ 2.23
CBWD3-207ENST00000611426 NFIXQ14938 502 aa28.95■■■□□ 2.22
CBWD3-207ENST00000611426 EIF5P55010 431 aaKnown RBP28.94■■■□□ 2.22
CBWD3-207ENST00000611426 RTF1Q92541 710 aaKnown RBP28.94■■■□□ 2.22
CBWD3-207ENST00000611426 BCL2L12Q9HB09 334 aa28.94■■■□□ 2.22
CBWD3-207ENST00000611426 BRCA1P38398 1863 aaKnown RBP28.94■■■□□ 2.22
CBWD3-207ENST00000611426 A0A087WZG4 1122 aa28.93■■■□□ 2.22
CBWD3-207ENST00000611426 DALRD3Q5D0E6 543 aaKnown RBP28.92■■■□□ 2.22
CBWD3-207ENST00000611426 CHRNA5P30532 468 aa28.91■■■□□ 2.22
CBWD3-207ENST00000611426 KCNQ3O43525 872 aa28.9■■■□□ 2.22
CBWD3-207ENST00000611426 MCM10Q7L590 875 aa28.9■■■□□ 2.22
CBWD3-207ENST00000611426 ZNF330Q9Y3S2 320 aaPredicted RBP28.9■■■□□ 2.22
CBWD3-207ENST00000611426 SERPINB2P05120 415 aa28.89■■■□□ 2.22
CBWD3-207ENST00000611426 MIER1Q8N108 512 aa28.88■■■□□ 2.21
CBWD3-207ENST00000611426 IL6STP40189 918 aaPredicted RBP28.88■■■□□ 2.21
CBWD3-207ENST00000611426 NPM2Q86SE8 214 aaKnown RBP28.88■■■□□ 2.21
CBWD3-207ENST00000611426 AFDNP55196 1824 aaKnown RBP28.87■■■□□ 2.21
CBWD3-207ENST00000611426 ARFGEF1Q9Y6D6 1849 aa28.87■■■□□ 2.21
CBWD3-207ENST00000611426 A1BGP04217 495 aa28.87■■■□□ 2.21
CBWD3-207ENST00000611426 BICDL1Q6ZP65 573 aa28.87■■■□□ 2.21
CBWD3-207ENST00000611426 HTATSF1O43719 755 aaKnown RBP28.86■■■□□ 2.21
CBWD3-207ENST00000611426 TBC1D2BQ9UPU7 963 aa28.86■■■□□ 2.21
CBWD3-207ENST00000611426 NEFMP07197 916 aa28.85■■■□□ 2.21
CBWD3-207ENST00000611426 DCTN1Q14203 1278 aa28.85■■■□□ 2.21
CBWD3-207ENST00000611426 NRXN2Q9P2S2 1712 aa28.83■■■□□ 2.21
CBWD3-207ENST00000611426 USP16Q9Y5T5 823 aa28.83■■■□□ 2.21
CBWD3-207ENST00000611426 TBC1D9BQ66K14 1250 aa28.82■■■□□ 2.2
CBWD3-207ENST00000611426 SNRPA1P09661 255 aaKnown RBP28.8■■■□□ 2.2
CBWD3-207ENST00000611426 C9orf131Q5VYM1 1079 aa28.8■■■□□ 2.2
CBWD3-207ENST00000611426 PRAMEF22A3QJZ6 481 aa28.79■■■□□ 2.2
CBWD3-207ENST00000611426 TAF7Q15545 349 aaPredicted RBP28.79■■■□□ 2.2
CBWD3-207ENST00000611426 C2CD5Q86YS7 1000 aa28.78■■■□□ 2.2
CBWD3-207ENST00000611426 H0YIN7 160 aa28.77■■■□□ 2.2
CBWD3-207ENST00000611426 KIF3CO14782 793 aa28.77■■■□□ 2.2
CBWD3-207ENST00000611426 PIP4K2AP48426 406 aaPredicted RBP28.76■■■□□ 2.2
CBWD3-207ENST00000611426 DZIP3Q86Y13 1208 aaKnown RBP28.76■■■□□ 2.2
CBWD3-207ENST00000611426 SCN7AQ01118 1682 aa28.76■■■□□ 2.19
CBWD3-207ENST00000611426 CARMIL3Q8ND23 1372 aa28.76■■■□□ 2.19
CBWD3-207ENST00000611426 CAMTA2O94983 1202 aa28.75■■■□□ 2.19
CBWD3-207ENST00000611426 TTLL6Q8N841 843 aa28.75■■■□□ 2.19
CBWD3-207ENST00000611426 SETDB2Q96T68 719 aa28.75■■■□□ 2.19
CBWD3-207ENST00000611426 PLEKHF1Q96S99 279 aa28.75■■■□□ 2.19
CBWD3-207ENST00000611426 PNNQ9H307 717 aaKnown RBP28.75■■■□□ 2.19
CBWD3-207ENST00000611426 MIS18AQ9NYP9 233 aa28.75■■■□□ 2.19
CBWD3-207ENST00000611426 RNF181Q9P0P0 153 aa28.75■■■□□ 2.19
CBWD3-207ENST00000611426 PDE6BP35913 854 aa28.73■■■□□ 2.19
CBWD3-207ENST00000611426 PRR5LQ6MZQ0 368 aa28.73■■■□□ 2.19
CBWD3-207ENST00000611426 BRIP1Q9BX63 1249 aa28.73■■■□□ 2.19
CBWD3-207ENST00000611426 CEP350Q5VT06 3117 aa28.73■■■□□ 2.19
CBWD3-207ENST00000611426 NPHP1O15259 732 aa28.72■■■□□ 2.19
CBWD3-207ENST00000611426 CCDC24Q8N4L8 307 aa28.72■■■□□ 2.19
CBWD3-207ENST00000611426 DLEC1Q9Y238 1755 aa28.71■■■□□ 2.19
CBWD3-207ENST00000611426 DLG5Q8TDM6 1919 aa28.71■■■□□ 2.19
CBWD3-207ENST00000611426 NFE2L2Q16236 605 aa28.71■■■□□ 2.19
CBWD3-207ENST00000611426 PNISRQ8TF01 805 aaKnown RBP28.71■■■□□ 2.19
CBWD3-207ENST00000611426 PDZRN3Q9UPQ7 1066 aa28.71■■■□□ 2.19
CBWD3-207ENST00000611426 RALBP1Q15311 655 aa28.7■■■□□ 2.18
CBWD3-207ENST00000611426 ZNF622Q969S3 477 aaKnown RBP eCLIP28.7■■■□□ 2.18
CBWD3-207ENST00000611426 MAPK8IP3Q9UPT6 1336 aa28.7■■■□□ 2.18
CBWD3-207ENST00000611426 CLEC4GQ6UXB4 293 aa28.69■■■□□ 2.18
CBWD3-207ENST00000611426 CNBD1Q8NA66 436 aa28.69■■■□□ 2.18
CBWD3-207ENST00000611426 NMRK2Q9NPI5 230 aa28.69■■■□□ 2.18
CBWD3-207ENST00000611426 SBF1O95248 1867 aa28.68■■■□□ 2.18
CBWD3-207ENST00000611426 NBPF26B4DH59 902 aa28.68■■■□□ 2.18
CBWD3-207ENST00000611426 HSPA6P17066 643 aa28.68■■■□□ 2.18
CBWD3-207ENST00000611426 RASSF7Q02833 373 aa28.68■■■□□ 2.18
CBWD3-207ENST00000611426 NBPF10Q6P3W6 841 aaKnown RBP28.68■■■□□ 2.18
CBWD3-207ENST00000611426 NBPF15Q8N660 670 aa28.68■■■□□ 2.18
CBWD3-207ENST00000611426 ZNF652Q9Y2D9 606 aa28.68■■■□□ 2.18
CBWD3-207ENST00000611426 BCORQ6W2J9 1755 aa28.67■■■□□ 2.18
CBWD3-207ENST00000611426 ANP32CO43423 234 aa28.67■■■□□ 2.18
CBWD3-207ENST00000611426 ANKRD31Q8N7Z5 1873 aa28.67■■■□□ 2.18
CBWD3-207ENST00000611426 ST5P78524 1137 aa28.66■■■□□ 2.18
CBWD3-207ENST00000611426 TOMM70O94826 608 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms