RNA–Protein interactions for RNA: ENST00000610705.1

AP004609.3-201, humanhuman

BASIC

Gene AP004609.3, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.3-201ENST00000610705 DDX21Q9NR30 783 aaKnown RBP eCLIP31.08■■■□□ 2.57
AP004609.3-201ENST00000610705 USP21Q9UK80 565 aa31.06■■■□□ 2.56
AP004609.3-201ENST00000610705 USP16Q9Y5T5 823 aa31.06■■■□□ 2.56
AP004609.3-201ENST00000610705 PXDNLA1KZ92 1463 aa31.06■■■□□ 2.56
AP004609.3-201ENST00000610705 TSHZ2Q9NRE2 1034 aa31.06■■■□□ 2.56
AP004609.3-201ENST00000610705 UBR2Q8IWV8 1755 aa31.05■■■□□ 2.56
AP004609.3-201ENST00000610705 PTCD1O75127 700 aaKnown RBP31.04■■■□□ 2.56
AP004609.3-201ENST00000610705 PIGBQ92521 554 aa31.04■■■□□ 2.56
AP004609.3-201ENST00000610705 GLI3P10071 1580 aa31.04■■■□□ 2.56
AP004609.3-201ENST00000610705 KCPQ6ZWJ8 1503 aa31.04■■■□□ 2.56
AP004609.3-201ENST00000610705 MEIS3Q99687 375 aa31.04■■■□□ 2.56
AP004609.3-201ENST00000610705 PDIA6Q15084 440 aa31.03■■■□□ 2.56
AP004609.3-201ENST00000610705 FAM98CQ17RN3 349 aaKnown RBP31.03■■■□□ 2.56
AP004609.3-201ENST00000610705 PI4KAP2A4QPH2 592 aa31.02■■■□□ 2.56
AP004609.3-201ENST00000610705 PI4KAP1Q8N8J0 262 aa31.02■■■□□ 2.56
AP004609.3-201ENST00000610705 MYL6BP14649 208 aa31.01■■■□□ 2.56
AP004609.3-201ENST00000610705 SYTL4Q96C24 671 aaPredicted RBP31.01■■■□□ 2.56
AP004609.3-201ENST00000610705 DNAAF4Q8WXU2 420 aa31.01■■■□□ 2.55
AP004609.3-201ENST00000610705 ITGB4P16144 1822 aa31.01■■■□□ 2.55
AP004609.3-201ENST00000610705 LAMB4A4D0S4 1761 aa31.01■■■□□ 2.55
AP004609.3-201ENST00000610705 ADCY9O60503 1353 aa30.99■■■□□ 2.55
AP004609.3-201ENST00000610705 DDX58O95786 925 aaKnown RBP30.99■■■□□ 2.55
AP004609.3-201ENST00000610705 AIMP1Q12904 312 aaKnown RBP30.99■■■□□ 2.55
AP004609.3-201ENST00000610705 MARCH10Q8NA82 808 aaPredicted RBP30.99■■■□□ 2.55
AP004609.3-201ENST00000610705 ASAP1Q9ULH1 1129 aa30.99■■■□□ 2.55
AP004609.3-201ENST00000610705 N4BP2Q86UW6 1770 aaPredicted RBP30.98■■■□□ 2.55
AP004609.3-201ENST00000610705 BCL9O00512 1426 aa30.98■■■□□ 2.55
AP004609.3-201ENST00000610705 SRCIN1Q9C0H9 1055 aa30.98■■■□□ 2.55
AP004609.3-201ENST00000610705 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.98■■■□□ 2.55
AP004609.3-201ENST00000610705 RGS3P49796 1198 aa30.97■■■□□ 2.55
AP004609.3-201ENST00000610705 KSR2Q6VAB6 950 aa30.97■■■□□ 2.55
AP004609.3-201ENST00000610705 ATG3Q9NT62 314 aa30.97■■■□□ 2.55
AP004609.3-201ENST00000610705 DOT1LQ8TEK3 1739 aa30.97■■■□□ 2.55
AP004609.3-201ENST00000610705 PRIM1P49642 420 aaKnown RBP30.96■■■□□ 2.55
AP004609.3-201ENST00000610705 MAP3K2Q9Y2U5 619 aa30.96■■■□□ 2.55
AP004609.3-201ENST00000610705 GNAI3P08754 354 aa30.95■■■□□ 2.55
AP004609.3-201ENST00000610705 PIP4K2AP48426 406 aaPredicted RBP30.95■■■□□ 2.55
AP004609.3-201ENST00000610705 A0A0G2JS52 829 aa30.95■■■□□ 2.54
AP004609.3-201ENST00000610705 MYT1Q01538 1121 aa30.95■■■□□ 2.54
AP004609.3-201ENST00000610705 PDZRN3Q9UPQ7 1066 aa30.95■■■□□ 2.54
AP004609.3-201ENST00000610705 SIRT2Q8IXJ6 389 aa30.94■■■□□ 2.54
AP004609.3-201ENST00000610705 XAGE3Q8WTP9 111 aa30.94■■■□□ 2.54
AP004609.3-201ENST00000610705 AFF2P51816 1311 aa30.94■■■□□ 2.54
AP004609.3-201ENST00000610705 BEND3Q5T5X7 828 aa30.93■■■□□ 2.54
AP004609.3-201ENST00000610705 SMC5Q8IY18 1101 aa30.93■■■□□ 2.54
AP004609.3-201ENST00000610705 ERBB4Q15303 1308 aa30.93■■■□□ 2.54
AP004609.3-201ENST00000610705 COPS6Q7L5N1 327 aa30.93■■■□□ 2.54
AP004609.3-201ENST00000610705 RPAP2Q8IXW5 612 aaPredicted RBP30.93■■■□□ 2.54
AP004609.3-201ENST00000610705 RBM42Q9BTD8 480 aaKnown RBP30.93■■■□□ 2.54
AP004609.3-201ENST00000610705 ATP10DQ9P241 1426 aa30.92■■■□□ 2.54
AP004609.3-201ENST00000610705 GNAI2P04899 355 aa30.92■■■□□ 2.54
AP004609.3-201ENST00000610705 ANKRD44Q8N8A2 993 aa30.91■■■□□ 2.54
AP004609.3-201ENST00000610705 ACSBG1Q96GR2 724 aa30.91■■■□□ 2.54
AP004609.3-201ENST00000610705 KAT6BQ8WYB5 2073 aa30.91■■■□□ 2.54
AP004609.3-201ENST00000610705 CEP85Q6P2H3 762 aa30.91■■■□□ 2.54
AP004609.3-201ENST00000610705 RIC3Q7Z5B4 369 aa30.91■■■□□ 2.54
AP004609.3-201ENST00000610705 LRP10Q7Z4F1 713 aa30.9■■■□□ 2.54
AP004609.3-201ENST00000610705 VSIG10Q8N0Z9 540 aa30.9■■■□□ 2.54
AP004609.3-201ENST00000610705 USP44Q9H0E7 712 aa30.89■■■□□ 2.54
AP004609.3-201ENST00000610705 GCC1Q96CN9 775 aa30.89■■■□□ 2.53
AP004609.3-201ENST00000610705 TEX13AQ9BXU3 409 aaPredicted RBP30.89■■■□□ 2.53
AP004609.3-201ENST00000610705 A1BGP04217 495 aa30.88■■■□□ 2.53
AP004609.3-201ENST00000610705 UBTFL1P0CB47 393 aaPredicted RBP30.88■■■□□ 2.53
AP004609.3-201ENST00000610705 NBPF26B4DH59 902 aa30.87■■■□□ 2.53
AP004609.3-201ENST00000610705 NBPF14Q5TI25 921 aa30.87■■■□□ 2.53
AP004609.3-201ENST00000610705 NBPF10Q6P3W6 841 aaKnown RBP30.87■■■□□ 2.53
AP004609.3-201ENST00000610705 NBPF15Q8N660 670 aa30.87■■■□□ 2.53
AP004609.3-201ENST00000610705 DNAJC10Q8IXB1 793 aa30.86■■■□□ 2.53
AP004609.3-201ENST00000610705 GJD4Q96KN9 370 aaPredicted RBP30.86■■■□□ 2.53
AP004609.3-201ENST00000610705 ALDH1L1O75891 902 aa30.85■■■□□ 2.53
AP004609.3-201ENST00000610705 ANKRD13DQ6ZTN6 518 aa30.85■■■□□ 2.53
AP004609.3-201ENST00000610705 LINS1Q8NG48 757 aa30.84■■■□□ 2.53
AP004609.3-201ENST00000610705 NEXNQ0ZGT2 675 aa30.83■■■□□ 2.53
AP004609.3-201ENST00000610705 TRPC5Q9UL62 973 aaPredicted RBP30.83■■■□□ 2.53
AP004609.3-201ENST00000610705 LRRFIP2Q9Y608 721 aaKnown RBP30.83■■■□□ 2.53
AP004609.3-201ENST00000610705 HMMRO75330 724 aa30.82■■■□□ 2.53
AP004609.3-201ENST00000610705 STARD3NLO95772 234 aa30.82■■■□□ 2.53
AP004609.3-201ENST00000610705 NUCB1Q02818 461 aa30.82■■■□□ 2.52
AP004609.3-201ENST00000610705 CWF19L2Q2TBE0 894 aaKnown RBP30.82■■■□□ 2.52
AP004609.3-201ENST00000610705 THSD7AQ9UPZ6 1657 aa30.81■■■□□ 2.52
AP004609.3-201ENST00000610705 ATRNO75882 1429 aa30.8■■■□□ 2.52
AP004609.3-201ENST00000610705 METTL22Q9BUU2 404 aaPredicted RBP30.8■■■□□ 2.52
AP004609.3-201ENST00000610705 C9orf78Q9NZ63 289 aaPredicted RBP30.8■■■□□ 2.52
AP004609.3-201ENST00000610705 NBPF7P0C2Y1 421 aaPredicted RBP30.8■■■□□ 2.52
AP004609.3-201ENST00000610705 ANKRD45Q5TZF3 282 aa30.8■■■□□ 2.52
AP004609.3-201ENST00000610705 MYD88Q99836 296 aa30.8■■■□□ 2.52
AP004609.3-201ENST00000610705 DCTPP1Q9H773 170 aa30.8■■■□□ 2.52
AP004609.3-201ENST00000610705 PLBD2Q8NHP8 589 aa30.79■■■□□ 2.52
AP004609.3-201ENST00000610705 SLC4A9Q96Q91 983 aa30.79■■■□□ 2.52
AP004609.3-201ENST00000610705 CHD1LQ86WJ1 897 aa30.78■■■□□ 2.52
AP004609.3-201ENST00000610705 LNPKQ9C0E8 428 aa30.77■■■□□ 2.52
AP004609.3-201ENST00000610705 KCNQ2O43526 872 aa30.76■■■□□ 2.52
AP004609.3-201ENST00000610705 IGKV5-2P06315 115 aa30.76■■■□□ 2.52
AP004609.3-201ENST00000610705 ATP8B2P98198 1209 aa30.76■■■□□ 2.52
AP004609.3-201ENST00000610705 TTLL7Q6ZT98 887 aa30.76■■■□□ 2.52
AP004609.3-201ENST00000610705 ZNF330Q9Y3S2 320 aaPredicted RBP30.76■■■□□ 2.51
AP004609.3-201ENST00000610705 RBM19Q9Y4C8 960 aaKnown RBP30.76■■■□□ 2.51
AP004609.3-201ENST00000610705 PDE4AP27815 886 aa30.75■■■□□ 2.51
AP004609.3-201ENST00000610705 ARFGEF2Q9Y6D5 1785 aa30.75■■■□□ 2.51
AP004609.3-201ENST00000610705 QTRT2Q9H974 415 aaKnown RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms