RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 PDIA6Q15084 440 aa15.45■□□□□ 0.06
TP53-219ENST00000610538 SMC5Q8IY18 1101 aa15.45■□□□□ 0.06
TP53-219ENST00000610538 BACH2Q9BYV9 841 aa15.45■□□□□ 0.06
TP53-219ENST00000610538 ERVV-2B6SEH9 535 aa15.45■□□□□ 0.06
TP53-219ENST00000610538 NKX1-1Q15270 411 aaPredicted RBP15.45■□□□□ 0.06
TP53-219ENST00000610538 NPM2Q86SE8 214 aaKnown RBP15.45■□□□□ 0.06
TP53-219ENST00000610538 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
TP53-219ENST00000610538 MAP3K2Q9Y2U5 619 aa15.45■□□□□ 0.06
TP53-219ENST00000610538 CEP85Q6P2H3 762 aa15.44■□□□□ 0.06
TP53-219ENST00000610538 DNAAF4Q8WXU2 420 aa15.44■□□□□ 0.06
TP53-219ENST00000610538 USP44Q9H0E7 712 aa15.44■□□□□ 0.06
TP53-219ENST00000610538 TMOD3Q9NYL9 352 aa15.44■□□□□ 0.06
TP53-219ENST00000610538 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
TP53-219ENST00000610538 PKD1L3Q7Z443 1732 aa15.44■□□□□ 0.06
TP53-219ENST00000610538 COPS6Q7L5N1 327 aa15.43■□□□□ 0.06
TP53-219ENST00000610538 PIGBQ92521 554 aa15.43■□□□□ 0.06
TP53-219ENST00000610538 SRCIN1Q9C0H9 1055 aa15.43■□□□□ 0.06
TP53-219ENST00000610538 EP400Q96L91 3159 aa15.43■□□□□ 0.06
TP53-219ENST00000610538 CWF19L2Q2TBE0 894 aaKnown RBP15.43■□□□□ 0.06
TP53-219ENST00000610538 CHMP4AQ9BY43 222 aa15.43■□□□□ 0.06
TP53-219ENST00000610538 NBPF7P0C2Y1 421 aaPredicted RBP15.42■□□□□ 0.06
TP53-219ENST00000610538 XAGE3Q8WTP9 111 aa15.42■□□□□ 0.06
TP53-219ENST00000610538 HYPKQ9NX55 129 aa15.42■□□□□ 0.06
TP53-219ENST00000610538 SPATA31A1Q5TZJ5 1347 aa15.42■□□□□ 0.06
TP53-219ENST00000610538 SIPA1L3O60292 1781 aaPredicted RBP15.42■□□□□ 0.06
TP53-219ENST00000610538 COL14A1Q05707 1796 aaKnown RBP15.42■□□□□ 0.06
TP53-219ENST00000610538 ADAMTS7Q9UKP4 1686 aa15.42■□□□□ 0.06
TP53-219ENST00000610538 LRRFIP2Q9Y608 721 aaKnown RBP15.42■□□□□ 0.06
TP53-219ENST00000610538 ADCY9O60503 1353 aa15.42■□□□□ 0.06
TP53-219ENST00000610538 A1BGP04217 495 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 GNAI2P04899 355 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 BEND3Q5T5X7 828 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 ANKRD44Q8N8A2 993 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
TP53-219ENST00000610538 PARP4Q9UKK3 1724 aaKnown RBP15.41■□□□□ 0.06
TP53-219ENST00000610538 NUCB1Q02818 461 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 DDB1Q16531 1140 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 FAM98CQ17RN3 349 aaKnown RBP15.41■□□□□ 0.06
TP53-219ENST00000610538 RIC3Q7Z5B4 369 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 CHD1LQ86WJ1 897 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 ACSBG1Q96GR2 724 aa15.41■□□□□ 0.06
TP53-219ENST00000610538 ZNF330Q9Y3S2 320 aaPredicted RBP15.41■□□□□ 0.06
TP53-219ENST00000610538 UBTFL1P0CB47 393 aaPredicted RBP15.4■□□□□ 0.06
TP53-219ENST00000610538 PRIM1P49642 420 aaKnown RBP15.4■□□□□ 0.06
TP53-219ENST00000610538 C8orf34Q49A92 452 aa15.4■□□□□ 0.06
TP53-219ENST00000610538 KSR2Q6VAB6 950 aa15.4■□□□□ 0.06
TP53-219ENST00000610538 COL22A1Q8NFW1 1626 aaPredicted RBP15.4■□□□□ 0.06
TP53-219ENST00000610538 PNMA6EA0A0J9YXQ4 647 aa15.4■□□□□ 0.06
TP53-219ENST00000610538 HSPA1LP34931 641 aa15.4■□□□□ 0.06
TP53-219ENST00000610538 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
TP53-219ENST00000610538 GNAI3P08754 354 aa15.39■□□□□ 0.05
TP53-219ENST00000610538 FAM161AQ3B820 660 aa15.39■□□□□ 0.05
TP53-219ENST00000610538 ATP10DQ9P241 1426 aa15.39■□□□□ 0.05
TP53-219ENST00000610538 SMARCA5O60264 1052 aaPredicted RBP15.39■□□□□ 0.05
TP53-219ENST00000610538 C16orf71Q8IYS4 520 aaPredicted RBP15.39■□□□□ 0.05
TP53-219ENST00000610538 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
TP53-219ENST00000610538 CACNA1FO60840 1977 aa15.39■□□□□ 0.05
TP53-219ENST00000610538 MSH5O43196 834 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 JARID2Q92833 1246 aaPredicted RBP15.38■□□□□ 0.05
TP53-219ENST00000610538 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 SPATA31A5Q5VU36 1347 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 SPATA31A7Q8IWB4 1347 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 NBPF26B4DH59 902 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 NBPF14Q5TI25 921 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 NBPF10Q6P3W6 841 aaKnown RBP15.38■□□□□ 0.05
TP53-219ENST00000610538 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 NBPF15Q8N660 670 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 DCTPP1Q9H773 170 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 ATG3Q9NT62 314 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 C9orf78Q9NZ63 289 aaPredicted RBP15.38■□□□□ 0.05
TP53-219ENST00000610538 EXOC6BQ9Y2D4 811 aa15.38■□□□□ 0.05
TP53-219ENST00000610538 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
TP53-219ENST00000610538 MRC1P22897 1456 aa15.37■□□□□ 0.05
TP53-219ENST00000610538 DISP2A7MBM2 1401 aa15.37■□□□□ 0.05
TP53-219ENST00000610538 JCADQ9P266 1359 aa15.37■□□□□ 0.05
TP53-219ENST00000610538 DDX58O95786 925 aaKnown RBP15.37■□□□□ 0.05
TP53-219ENST00000610538 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
TP53-219ENST00000610538 TMEM132AQ24JP5 1023 aa15.36■□□□□ 0.05
TP53-219ENST00000610538 LRP10Q7Z4F1 713 aa15.36■□□□□ 0.05
TP53-219ENST00000610538 MARCH10Q8NA82 808 aaPredicted RBP15.36■□□□□ 0.05
TP53-219ENST00000610538 SHANK3Q9BYB0 1731 aa15.36■□□□□ 0.05
TP53-219ENST00000610538 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
TP53-219ENST00000610538 SEC24BO95487 1268 aa15.36■□□□□ 0.05
TP53-219ENST00000610538 MYD88Q99836 296 aa15.36■□□□□ 0.05
TP53-219ENST00000610538 C5P01031 1676 aa15.36■□□□□ 0.05
TP53-219ENST00000610538 FAM182BQ5T319 152 aa15.35■□□□□ 0.05
TP53-219ENST00000610538 DNAJC10Q8IXB1 793 aa15.35■□□□□ 0.05
TP53-219ENST00000610538 IGKV5-2P06315 115 aa15.35■□□□□ 0.05
TP53-219ENST00000610538 MEX3CQ5U5Q3 659 aaKnown RBP15.35■□□□□ 0.05
TP53-219ENST00000610538 TTLL7Q6ZT98 887 aa15.35■□□□□ 0.05
TP53-219ENST00000610538 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
TP53-219ENST00000610538 USP21Q9UK80 565 aa15.35■□□□□ 0.05
TP53-219ENST00000610538 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
TP53-219ENST00000610538 THRAP3Q9Y2W1 955 aaKnown RBP15.34■□□□□ 0.05
TP53-219ENST00000610538 PLCH1Q4KWH8 1693 aa15.34■□□□□ 0.05
TP53-219ENST00000610538 HMMRO75330 724 aa15.34■□□□□ 0.05
TP53-219ENST00000610538 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
TP53-219ENST00000610538 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
TP53-219ENST00000610538 KCNQ2O43526 872 aa15.33■□□□□ 0.05
TP53-219ENST00000610538 ATP8B2P98198 1209 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms