RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
PRKN-208ENST00000610470 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.29
PRKN-208ENST00000610470 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.29
PRKN-208ENST00000610470 FMNL2Q96PY5 1086 aa23.13■■□□□ 1.29
PRKN-208ENST00000610470 A0A0G2JLW4 131 aa23.12■■□□□ 1.29
PRKN-208ENST00000610470 BTBD11A6QL63 1104 aa23.12■■□□□ 1.29
PRKN-208ENST00000610470 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
PRKN-208ENST00000610470 DDR1Q08345 913 aa23.12■■□□□ 1.29
PRKN-208ENST00000610470 KIAA1551Q9HCM1 1747 aa23.11■■□□□ 1.29
PRKN-208ENST00000610470 TM4SF1P30408 202 aa23.11■■□□□ 1.29
PRKN-208ENST00000610470 A0A087WZG4 1122 aa23.1■■□□□ 1.29
PRKN-208ENST00000610470 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
PRKN-208ENST00000610470 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
PRKN-208ENST00000610470 NEFMP07197 916 aa23.1■■□□□ 1.29
PRKN-208ENST00000610470 DPEP1P16444 411 aa23.1■■□□□ 1.29
PRKN-208ENST00000610470 N4BP2Q86UW6 1770 aaPredicted RBP23.09■■□□□ 1.29
PRKN-208ENST00000610470 BCS1LQ9Y276 419 aa23.09■■□□□ 1.29
PRKN-208ENST00000610470 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.29
PRKN-208ENST00000610470 MCM10Q7L590 875 aa23.08■■□□□ 1.29
PRKN-208ENST00000610470 GIGYF1O75420 1035 aaPredicted RBP23.07■■□□□ 1.28
PRKN-208ENST00000610470 ATP10DQ9P241 1426 aa23.07■■□□□ 1.28
PRKN-208ENST00000610470 KCNQ3O43525 872 aa23.06■■□□□ 1.28
PRKN-208ENST00000610470 NFIXQ14938 502 aa23.06■■□□□ 1.28
PRKN-208ENST00000610470 ADCY9O60503 1353 aa23.05■■□□□ 1.28
PRKN-208ENST00000610470 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
PRKN-208ENST00000610470 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
PRKN-208ENST00000610470 BCL2L12Q9HB09 334 aa23.05■■□□□ 1.28
PRKN-208ENST00000610470 PIM2Q9P1W9 311 aa23.05■■□□□ 1.28
PRKN-208ENST00000610470 KCNA3P22001 575 aa23.04■■□□□ 1.28
PRKN-208ENST00000610470 C1QTNF8P60827 252 aa23.04■■□□□ 1.28
PRKN-208ENST00000610470 RALBP1Q15311 655 aa23.04■■□□□ 1.28
PRKN-208ENST00000610470 PNNQ9H307 717 aaKnown RBP23.04■■□□□ 1.28
PRKN-208ENST00000610470 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
PRKN-208ENST00000610470 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
PRKN-208ENST00000610470 BRCA1P38398 1863 aaKnown RBP23.01■■□□□ 1.27
PRKN-208ENST00000610470 A1BGP04217 495 aa23.01■■□□□ 1.27
PRKN-208ENST00000610470 SERPINB2P05120 415 aa23.01■■□□□ 1.27
PRKN-208ENST00000610470 SNRPA1P09661 255 aaKnown RBP23.01■■□□□ 1.27
PRKN-208ENST00000610470 DALRD3Q5D0E6 543 aaKnown RBP23.01■■□□□ 1.27
PRKN-208ENST00000610470 ARHGAP27Q6ZUM4 889 aa23.01■■□□□ 1.27
PRKN-208ENST00000610470 GPBP1L1Q9HC44 474 aaPredicted RBP23.01■■□□□ 1.27
PRKN-208ENST00000610470 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
PRKN-208ENST00000610470 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
PRKN-208ENST00000610470 CHRNA5P30532 468 aa22.99■■□□□ 1.27
PRKN-208ENST00000610470 DDX10Q13206 875 aaKnown RBP22.99■■□□□ 1.27
PRKN-208ENST00000610470 TBC1D2BQ9UPU7 963 aa22.99■■□□□ 1.27
PRKN-208ENST00000610470 USP16Q9Y5T5 823 aa22.99■■□□□ 1.27
PRKN-208ENST00000610470 MAPK8IP3Q9UPT6 1336 aa22.99■■□□□ 1.27
PRKN-208ENST00000610470 NFE2L2Q16236 605 aa22.98■■□□□ 1.27
PRKN-208ENST00000610470 BICDL1Q6ZP65 573 aa22.98■■□□□ 1.27
PRKN-208ENST00000610470 NRXN2Q9P2S2 1712 aa22.98■■□□□ 1.27
PRKN-208ENST00000610470 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
PRKN-208ENST00000610470 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
PRKN-208ENST00000610470 SCN7AQ01118 1682 aa22.97■■□□□ 1.27
PRKN-208ENST00000610470 ARFGEF1Q9Y6D6 1849 aa22.96■■□□□ 1.27
PRKN-208ENST00000610470 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
PRKN-208ENST00000610470 TBC1D9BQ66K14 1250 aa22.96■■□□□ 1.27
PRKN-208ENST00000610470 ZNF526Q8TF50 670 aaPredicted RBP22.96■■□□□ 1.27
PRKN-208ENST00000610470 DZIP3Q86Y13 1208 aaKnown RBP22.95■■□□□ 1.26
PRKN-208ENST00000610470 CARMIL3Q8ND23 1372 aa22.94■■□□□ 1.26
PRKN-208ENST00000610470 CAMTA2O94983 1202 aa22.94■■□□□ 1.26
PRKN-208ENST00000610470 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
PRKN-208ENST00000610470 DLG5Q8TDM6 1919 aa22.93■■□□□ 1.26
PRKN-208ENST00000610470 SETDB2Q96T68 719 aa22.93■■□□□ 1.26
PRKN-208ENST00000610470 MIS18AQ9NYP9 233 aa22.93■■□□□ 1.26
PRKN-208ENST00000610470 SENP3-EIF4A1A0A087X0R7 540 aa22.92■■□□□ 1.26
PRKN-208ENST00000610470 PIP4K2AP48426 406 aaPredicted RBP22.92■■□□□ 1.26
PRKN-208ENST00000610470 C2CD5Q86YS7 1000 aa22.92■■□□□ 1.26
PRKN-208ENST00000610470 PDZRN3Q9UPQ7 1066 aa22.92■■□□□ 1.26
PRKN-208ENST00000610470 H0YIN7 160 aa22.91■■□□□ 1.26
PRKN-208ENST00000610470 CLEC4GQ6UXB4 293 aa22.9■■□□□ 1.26
PRKN-208ENST00000610470 BRIP1Q9BX63 1249 aa22.9■■□□□ 1.26
PRKN-208ENST00000610470 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
PRKN-208ENST00000610470 NPHP1O15259 732 aa22.89■■□□□ 1.25
PRKN-208ENST00000610470 PDE6BP35913 854 aa22.89■■□□□ 1.25
PRKN-208ENST00000610470 C9orf131Q5VYM1 1079 aa22.89■■□□□ 1.25
PRKN-208ENST00000610470 PRR5LQ6MZQ0 368 aa22.89■■□□□ 1.25
PRKN-208ENST00000610470 TTLL6Q8N841 843 aa22.89■■□□□ 1.25
PRKN-208ENST00000610470 BCORQ6W2J9 1755 aa22.89■■□□□ 1.25
PRKN-208ENST00000610470 NBPF26B4DH59 902 aa22.88■■□□□ 1.25
PRKN-208ENST00000610470 NBPF10Q6P3W6 841 aaKnown RBP22.88■■□□□ 1.25
PRKN-208ENST00000610470 NBPF15Q8N660 670 aa22.88■■□□□ 1.25
PRKN-208ENST00000610470 CNBD1Q8NA66 436 aa22.88■■□□□ 1.25
PRKN-208ENST00000610470 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
PRKN-208ENST00000610470 KDM3BQ7LBC6 1761 aa22.88■■□□□ 1.25
PRKN-208ENST00000610470 DLEC1Q9Y238 1755 aa22.87■■□□□ 1.25
PRKN-208ENST00000610470 RGL2O15211 777 aa22.87■■□□□ 1.25
PRKN-208ENST00000610470 RIPK4P57078 832 aa22.86■■□□□ 1.25
PRKN-208ENST00000610470 EIF4A1P60842 406 aaKnown RBP22.86■■□□□ 1.25
PRKN-208ENST00000610470 ST5P78524 1137 aa22.86■■□□□ 1.25
PRKN-208ENST00000610470 LAMB4A4D0S4 1761 aa22.86■■□□□ 1.25
PRKN-208ENST00000610470 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
PRKN-208ENST00000610470 RNF181Q9P0P0 153 aa22.85■■□□□ 1.25
PRKN-208ENST00000610470 CCDC24Q8N4L8 307 aa22.84■■□□□ 1.25
PRKN-208ENST00000610470 ZNF622Q969S3 477 aaKnown RBP eCLIP22.84■■□□□ 1.25
PRKN-208ENST00000610470 KIF3CO14782 793 aa22.83■■□□□ 1.25
PRKN-208ENST00000610470 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
PRKN-208ENST00000610470 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.25
PRKN-208ENST00000610470 NBPF5PQ86XG9 351 aaPredicted RBP22.83■■□□□ 1.25
PRKN-208ENST00000610470 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms