RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 SLC52A2Q9HAB3 445 aa23.63■■□□□ 1.37
CHMP4A-211ENST00000609024 NARFQ9UHQ1 456 aa23.63■■□□□ 1.37
CHMP4A-211ENST00000609024 SOS1Q07889 1333 aaPredicted RBP23.62■■□□□ 1.37
CHMP4A-211ENST00000609024 TTLL6Q8N841 843 aa23.62■■□□□ 1.37
CHMP4A-211ENST00000609024 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
CHMP4A-211ENST00000609024 SBF1O95248 1867 aa23.62■■□□□ 1.37
CHMP4A-211ENST00000609024 GLTPD2A6NH11 291 aa23.61■■□□□ 1.37
CHMP4A-211ENST00000609024 H0YIN7 160 aa23.61■■□□□ 1.37
CHMP4A-211ENST00000609024 NFIXQ14938 502 aa23.61■■□□□ 1.37
CHMP4A-211ENST00000609024 SCN11AQ9UI33 1791 aa23.6■■□□□ 1.37
CHMP4A-211ENST00000609024 SERPINB2P05120 415 aa23.6■■□□□ 1.37
CHMP4A-211ENST00000609024 C2CD5Q86YS7 1000 aa23.6■■□□□ 1.37
CHMP4A-211ENST00000609024 COL15A1P39059 1388 aa23.6■■□□□ 1.37
CHMP4A-211ENST00000609024 CYP19A1P11511 503 aaPredicted RBP23.59■■□□□ 1.37
CHMP4A-211ENST00000609024 DPY19L2Q6NUT2 758 aa23.59■■□□□ 1.37
CHMP4A-211ENST00000609024 IL13P35225 146 aa23.58■■□□□ 1.37
CHMP4A-211ENST00000609024 SLC39A6Q13433 755 aa23.58■■□□□ 1.37
CHMP4A-211ENST00000609024 LGR6Q9HBX8 967 aa23.57■■□□□ 1.36
CHMP4A-211ENST00000609024 RNMTO43148 476 aaKnown RBP23.56■■□□□ 1.36
CHMP4A-211ENST00000609024 CANXP27824 592 aaKnown RBP23.56■■□□□ 1.36
CHMP4A-211ENST00000609024 BICDL1Q6ZP65 573 aa23.56■■□□□ 1.36
CHMP4A-211ENST00000609024 ZBTB1Q9Y2K1 713 aa23.56■■□□□ 1.36
CHMP4A-211ENST00000609024 HSPA5P11021 654 aaKnown RBP23.55■■□□□ 1.36
CHMP4A-211ENST00000609024 TTC5Q8N0Z6 440 aa23.55■■□□□ 1.36
CHMP4A-211ENST00000609024 AFDNP55196 1824 aaKnown RBP23.54■■□□□ 1.36
CHMP4A-211ENST00000609024 A0A087WZG4 1122 aa23.54■■□□□ 1.36
CHMP4A-211ENST00000609024 STARD3NLO95772 234 aa23.54■■□□□ 1.36
CHMP4A-211ENST00000609024 NPM2Q86SE8 214 aaKnown RBP23.54■■□□□ 1.36
CHMP4A-211ENST00000609024 VSIG10Q8N0Z9 540 aa23.54■■□□□ 1.36
CHMP4A-211ENST00000609024 ZNF622Q969S3 477 aaKnown RBP eCLIP23.54■■□□□ 1.362e-7■■■□□ 18.4
CHMP4A-211ENST00000609024 ADAMTS7Q9UKP4 1686 aa23.54■■□□□ 1.36
CHMP4A-211ENST00000609024 NPHP1O15259 732 aa23.53■■□□□ 1.36
CHMP4A-211ENST00000609024 HMOX1P09601 288 aa23.53■■□□□ 1.36
CHMP4A-211ENST00000609024 HSPA1AP0DMV8 641 aaKnown RBP23.52■■□□□ 1.36
CHMP4A-211ENST00000609024 HSPA1BP0DMV9 641 aaKnown RBP23.52■■□□□ 1.36
CHMP4A-211ENST00000609024 PDZRN3Q9UPQ7 1066 aa23.52■■□□□ 1.36
CHMP4A-211ENST00000609024 PDE6BP35913 854 aa23.51■■□□□ 1.35
CHMP4A-211ENST00000609024 PRELPP51888 382 aa23.51■■□□□ 1.35
CHMP4A-211ENST00000609024 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
CHMP4A-211ENST00000609024 ZNF330Q9Y3S2 320 aaPredicted RBP23.51■■□□□ 1.35
CHMP4A-211ENST00000609024 CLSPNQ9HAW4 1339 aa23.51■■□□□ 1.35
CHMP4A-211ENST00000609024 BCL2L12Q9HB09 334 aa23.5■■□□□ 1.35
CHMP4A-211ENST00000609024 ZNF219Q9P2Y4 722 aaPredicted RBP23.5■■□□□ 1.35
CHMP4A-211ENST00000609024 TIAM2Q8IVF5 1701 aa23.5■■□□□ 1.35
CHMP4A-211ENST00000609024 DLEC1Q9Y238 1755 aa23.5■■□□□ 1.35
CHMP4A-211ENST00000609024 ERFEQ4G0M1 354 aa23.49■■□□□ 1.35
CHMP4A-211ENST00000609024 NRXN2Q9P2S2 1712 aa23.49■■□□□ 1.35
CHMP4A-211ENST00000609024 MRC1P22897 1456 aa23.49■■□□□ 1.35
CHMP4A-211ENST00000609024 CCDC88AQ3V6T2 1871 aa23.48■■□□□ 1.35
CHMP4A-211ENST00000609024 NFKBIEO00221 500 aa23.48■■□□□ 1.35
CHMP4A-211ENST00000609024 C21orf2O43822 256 aa23.47■■□□□ 1.35
CHMP4A-211ENST00000609024 MTHFSDQ2M296 383 aaKnown RBP23.47■■□□□ 1.35
CHMP4A-211ENST00000609024 TEX13AQ9BXU3 409 aaPredicted RBP23.47■■□□□ 1.35
CHMP4A-211ENST00000609024 TEFQ10587 303 aa23.46■■□□□ 1.35
CHMP4A-211ENST00000609024 BRIP1Q9BX63 1249 aa23.46■■□□□ 1.35
CHMP4A-211ENST00000609024 CARMIL3Q8ND23 1372 aa23.45■■□□□ 1.34
CHMP4A-211ENST00000609024 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
CHMP4A-211ENST00000609024 VIRMAQ69YN4 1812 aaKnown RBP23.45■■□□□ 1.34
CHMP4A-211ENST00000609024 EIF5P55010 431 aaKnown RBP23.44■■□□□ 1.34
CHMP4A-211ENST00000609024 TBC1D9BQ66K14 1250 aa23.44■■□□□ 1.34
CHMP4A-211ENST00000609024 TAOK3Q9H2K8 898 aa23.44■■□□□ 1.34
CHMP4A-211ENST00000609024 CHADLQ6NUI6 762 aa23.43■■□□□ 1.34
CHMP4A-211ENST00000609024 TBC1D2BQ9UPU7 963 aa23.43■■□□□ 1.34
CHMP4A-211ENST00000609024 ST5P78524 1137 aa23.42■■□□□ 1.34
CHMP4A-211ENST00000609024 SOGA3Q5TF21 947 aa23.42■■□□□ 1.34
CHMP4A-211ENST00000609024 CNKSR1Q969H4 720 aa23.42■■□□□ 1.34
CHMP4A-211ENST00000609024 SETDB2Q96T68 719 aa23.42■■□□□ 1.34
CHMP4A-211ENST00000609024 CCDC24Q8N4L8 307 aa23.41■■□□□ 1.34
CHMP4A-211ENST00000609024 CNBD1Q8NA66 436 aa23.41■■□□□ 1.34
CHMP4A-211ENST00000609024 CREBZFQ9NS37 354 aa23.41■■□□□ 1.34
CHMP4A-211ENST00000609024 POTECB2RU33 542 aa23.4■■□□□ 1.34
CHMP4A-211ENST00000609024 PRR5LQ6MZQ0 368 aa23.4■■□□□ 1.34
CHMP4A-211ENST00000609024 MKRN1Q9UHC7 482 aaKnown RBP23.4■■□□□ 1.34
CHMP4A-211ENST00000609024 PCNTO95613 3336 aa23.39■■□□□ 1.34
CHMP4A-211ENST00000609024 IL6STP40189 918 aaPredicted RBP23.39■■□□□ 1.33
CHMP4A-211ENST00000609024 AMER1Q5JTC6 1135 aaPredicted RBP23.39■■□□□ 1.33
CHMP4A-211ENST00000609024 IQCA1LA6NCM1 817 aa23.38■■□□□ 1.33
CHMP4A-211ENST00000609024 ZNF790Q6PG37 636 aa23.38■■□□□ 1.33
CHMP4A-211ENST00000609024 GAS2L2Q8NHY3 880 aa23.38■■□□□ 1.33
CHMP4A-211ENST00000609024 ZNF496Q96IT1 587 aaPredicted RBP23.38■■□□□ 1.33
CHMP4A-211ENST00000609024 HEG1Q9ULI3 1381 aa23.38■■□□□ 1.33
CHMP4A-211ENST00000609024 UBR2Q8IWV8 1755 aa23.37■■□□□ 1.33
CHMP4A-211ENST00000609024 LTBP3Q9NS15 1303 aa23.37■■□□□ 1.33
CHMP4A-211ENST00000609024 GNAT3A8MTJ3 354 aa23.37■■□□□ 1.33
CHMP4A-211ENST00000609024 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
CHMP4A-211ENST00000609024 DDNO94850 711 aaPredicted RBP23.37■■□□□ 1.33
CHMP4A-211ENST00000609024 STYK1Q6J9G0 422 aa23.37■■□□□ 1.33
CHMP4A-211ENST00000609024 FMNL2Q96PY5 1086 aa23.37■■□□□ 1.33
CHMP4A-211ENST00000609024 DICER1Q9UPY3 1922 aaKnown RBP23.36■■□□□ 1.33
CHMP4A-211ENST00000609024 ANKRD31Q8N7Z5 1873 aa23.35■■□□□ 1.33
CHMP4A-211ENST00000609024 CC2D1BQ5T0F9 858 aaKnown RBP23.35■■□□□ 1.33
CHMP4A-211ENST00000609024 PRPF40BQ6NWY9 871 aaKnown RBP23.35■■□□□ 1.33
CHMP4A-211ENST00000609024 AIDAQ96BJ3 306 aa23.35■■□□□ 1.33
CHMP4A-211ENST00000609024 MASTLQ96GX5 879 aa23.35■■□□□ 1.33
CHMP4A-211ENST00000609024 FER1L6Q2WGJ9 1857 aa23.34■■□□□ 1.33
CHMP4A-211ENST00000609024 SCN7AQ01118 1682 aa23.34■■□□□ 1.33
CHMP4A-211ENST00000609024 DZIP3Q86Y13 1208 aaKnown RBP23.33■■□□□ 1.33
CHMP4A-211ENST00000609024 A1BGP04217 495 aa23.32■■□□□ 1.32
CHMP4A-211ENST00000609024 SRGNP10124 158 aa23.32■■□□□ 1.32
CHMP4A-211ENST00000609024 LDHDQ86WU2 507 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms