RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 CAVIN2O95810 425 aa7.75□□□□□ -1.17
HDDC2-205ENST00000608456 MX1P20591 662 aa7.75□□□□□ -1.17
HDDC2-205ENST00000608456 NOLC1Q14978 699 aaKnown RBP eCLIP7.75□□□□□ -1.174e-14■■■■□ 23.8
HDDC2-205ENST00000608456 CCDC183Q5T5S1 534 aa7.75□□□□□ -1.17
HDDC2-205ENST00000608456 TMX3Q96JJ7 454 aa7.75□□□□□ -1.17
HDDC2-205ENST00000608456 GPHNQ9NQX3 736 aaPredicted RBP7.75□□□□□ -1.17
HDDC2-205ENST00000608456 FAM13BQ9NYF5 915 aa7.75□□□□□ -1.17
HDDC2-205ENST00000608456 PTMAP06454 111 aaKnown RBP7.74□□□□□ -1.17
HDDC2-205ENST00000608456 GNAI3P08754 354 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 PDE1AP54750 535 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 UBE2HP62256 183 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 DMTNQ08495 405 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 FKBP5Q13451 457 aaPredicted RBP7.74□□□□□ -1.17
HDDC2-205ENST00000608456 CREBRFQ8IUR6 639 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 SLC39A7Q92504 469 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 DCBLD2Q96PD2 775 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 CDK19Q9BWU1 502 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 KIF3AQ9Y496 699 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 RGS12O14924 1447 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 RIMS2Q9UQ26 1411 aa7.74□□□□□ -1.17
HDDC2-205ENST00000608456 SYCE3A1L190 88 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 RAB11FIP3O75154 756 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 PLCG2P16885 1265 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 NEK4P51957 841 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
HDDC2-205ENST00000608456 CHAF1AQ13111 956 aaPredicted RBP7.73□□□□□ -1.17
HDDC2-205ENST00000608456 IDI1Q13907 227 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 DPY19L2Q6NUT2 758 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 TSPYL6Q8N831 410 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 L3MBTL3Q96JM7 780 aaPredicted RBP7.73□□□□□ -1.17
HDDC2-205ENST00000608456 ESYT1Q9BSJ8 1104 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 BOLA1Q9Y3E2 137 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.73□□□□□ -1.17
HDDC2-205ENST00000608456 SALL3Q9BXA9 1300 aa7.73□□□□□ -1.17
HDDC2-205ENST00000608456 KDM4AO75164 1064 aa7.72□□□□□ -1.17
HDDC2-205ENST00000608456 GNAI2P04899 355 aa7.72□□□□□ -1.17
HDDC2-205ENST00000608456 DHX8Q14562 1220 aaKnown RBP7.72□□□□□ -1.17
HDDC2-205ENST00000608456 AEBP1Q8IUX7 1158 aa7.72□□□□□ -1.17
HDDC2-205ENST00000608456 C8orf58Q8NAV2 365 aa7.72□□□□□ -1.17
HDDC2-205ENST00000608456 PHACTR3Q96KR7 559 aa7.72□□□□□ -1.17
HDDC2-205ENST00000608456 ZSCAN31Q96LW9 406 aaPredicted RBP7.72□□□□□ -1.17
HDDC2-205ENST00000608456 CCDC171Q6TFL3 1326 aa7.72□□□□□ -1.17
HDDC2-205ENST00000608456 CTIFO43310 598 aaKnown RBP7.71□□□□□ -1.18
HDDC2-205ENST00000608456 C7P10643 843 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 HSPA4P34932 840 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 FOXK1P85037 733 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 ATP8B2P98198 1209 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 PPP1R15BQ5SWA1 713 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.71□□□□□ -1.18
HDDC2-205ENST00000608456 ZGPATQ8N5A5 531 aaKnown RBP7.71□□□□□ -1.18
HDDC2-205ENST00000608456 KIAA1524Q8TCG1 905 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 PRAM1Q96QH2 718 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 TM6SF1Q9BZW5 370 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 SH2B1Q9NRF2 756 aaPredicted RBP7.71□□□□□ -1.18
HDDC2-205ENST00000608456 CABP1Q9NZU7 370 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 HDAC5Q9UQL6 1122 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.71□□□□□ -1.18
HDDC2-205ENST00000608456 TTC21BQ7Z4L5 1316 aa7.71□□□□□ -1.18
HDDC2-205ENST00000608456 TMEM131LA2VDJ0 1609 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 CACNA1FO60840 1977 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 G3V3G9 751 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 NEMFO60524 1076 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 TUBB4AP04350 444 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 CHMLP26374 656 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
HDDC2-205ENST00000608456 HSP90AB4PQ58FF6 505 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 DNTTIP2Q5QJE6 756 aaKnown RBP7.7□□□□□ -1.18
HDDC2-205ENST00000608456 GGT6Q6P531 493 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 ANKRD7Q92527 254 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 COG3Q96JB2 828 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 LRRCC1Q9C099 1032 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 PAXBP1Q9Y5B6 917 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 MAP2P11137 1827 aaKnown RBP7.7□□□□□ -1.18
HDDC2-205ENST00000608456 ELP1O95163 1332 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 ALKQ9UM73 1620 aa7.7□□□□□ -1.18
HDDC2-205ENST00000608456 TULP1O00294 542 aaPredicted RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 KIF3CO14782 793 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 ZSCAN22P10073 491 aaPredicted RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 ZSCAN20P17040 1043 aaPredicted RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 PDCP20941 246 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 RBM10P98175 930 aaKnown RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 GABPB1Q06547 395 aaPredicted RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 PKP1Q13835 747 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 USP48Q86UV5 1035 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 SP7Q8TDD2 431 aaPredicted RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 KCNB2Q92953 911 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 FUCA2Q9BTY2 467 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 ALDH8A1Q9H2A2 487 aaPredicted RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 C1orf115Q9H7X2 142 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 LIMCH1Q9UPQ0 1083 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 RPAP1Q9BWH6 1393 aaPredicted RBP7.69□□□□□ -1.18
HDDC2-205ENST00000608456 KNDC1Q76NI1 1749 aa7.69□□□□□ -1.18
HDDC2-205ENST00000608456 PXDNLA1KZ92 1463 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
HDDC2-205ENST00000608456 ADCY5O95622 1261 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 CCDC192P0DO97 292 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 TMEM132AQ24JP5 1023 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 TICAM2Q86XR7 235 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 C16orf71Q8IYS4 520 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms