RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 AMPD1P23109 780 aa9.59□□□□□ -0.87
UCHL3-205ENST00000607339 ARSJQ5FYB0 599 aaPredicted RBP9.59□□□□□ -0.87
UCHL3-205ENST00000607339 FAM182BQ5T319 152 aa9.59□□□□□ -0.87
UCHL3-205ENST00000607339 RRAGCQ9HB90 399 aa9.59□□□□□ -0.87
UCHL3-205ENST00000607339 NDFIP2Q9NV92 336 aa9.59□□□□□ -0.87
UCHL3-205ENST00000607339 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
UCHL3-205ENST00000607339 SKIP12755 728 aa9.58□□□□□ -0.88
UCHL3-205ENST00000607339 PSME1Q06323 249 aa9.58□□□□□ -0.88
UCHL3-205ENST00000607339 BNIP3LO60238 219 aa9.57□□□□□ -0.88
UCHL3-205ENST00000607339 ATP4AP20648 1035 aa9.57□□□□□ -0.88
UCHL3-205ENST00000607339 LAMC2Q13753 1193 aa9.57□□□□□ -0.88
UCHL3-205ENST00000607339 NOP53Q9NZM5 478 aaKnown RBP9.57□□□□□ -0.88
UCHL3-205ENST00000607339 CABP1Q9NZU7 370 aa9.57□□□□□ -0.88
UCHL3-205ENST00000607339 ADH6P28332 368 aa9.56□□□□□ -0.88
UCHL3-205ENST00000607339 ATP1A2P50993 1020 aa9.56□□□□□ -0.88
UCHL3-205ENST00000607339 GTF2IP78347 998 aa9.56□□□□□ -0.88
UCHL3-205ENST00000607339 PLA2G4EQ3MJ16 856 aa9.56□□□□□ -0.88
UCHL3-205ENST00000607339 SAMD5Q5TGI4 173 aa9.56□□□□□ -0.88
UCHL3-205ENST00000607339 ZCCHC2Q9C0B9 1178 aaKnown RBP9.56□□□□□ -0.88
UCHL3-205ENST00000607339 SERTAD1Q9UHV2 236 aa9.56□□□□□ -0.88
UCHL3-205ENST00000607339 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
UCHL3-205ENST00000607339 TMEM229AB2RXF0 380 aa9.55□□□□□ -0.88
UCHL3-205ENST00000607339 FAM157BP0CG42 384 aa9.55□□□□□ -0.88
UCHL3-205ENST00000607339 ALG2Q9H553 416 aa9.55□□□□□ -0.88
UCHL3-205ENST00000607339 GGA1Q9UJY5 639 aa9.55□□□□□ -0.88
UCHL3-205ENST00000607339 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
UCHL3-205ENST00000607339 GNB5O14775 395 aa9.54□□□□□ -0.88
UCHL3-205ENST00000607339 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
UCHL3-205ENST00000607339 BICDL1Q6ZP65 573 aa9.54□□□□□ -0.88
UCHL3-205ENST00000607339 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
UCHL3-205ENST00000607339 PCDHGA11Q9Y5H2 935 aa9.54□□□□□ -0.88
UCHL3-205ENST00000607339 SHISA8B8ZZ34 492 aa9.53□□□□□ -0.88
UCHL3-205ENST00000607339 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
UCHL3-205ENST00000607339 EPXP11678 715 aa9.53□□□□□ -0.88
UCHL3-205ENST00000607339 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
UCHL3-205ENST00000607339 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
UCHL3-205ENST00000607339 NCOA4Q13772 614 aa9.52□□□□□ -0.89
UCHL3-205ENST00000607339 NEUROD4Q9HD90 331 aa9.52□□□□□ -0.89
UCHL3-205ENST00000607339 SCHIP1Q9P0W5 487 aaPredicted RBP9.52□□□□□ -0.89
UCHL3-205ENST00000607339 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
UCHL3-205ENST00000607339 KHNYNO15037 678 aaKnown RBP9.51□□□□□ -0.89
UCHL3-205ENST00000607339 MAPTP10636 758 aaKnown RBP9.51□□□□□ -0.89
UCHL3-205ENST00000607339 CTBSQ01459 385 aa9.51□□□□□ -0.89
UCHL3-205ENST00000607339 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
UCHL3-205ENST00000607339 SPOCK3Q9BQ16 436 aa9.51□□□□□ -0.89
UCHL3-205ENST00000607339 PRR12Q9ULL5 1215 aa9.51□□□□□ -0.89
UCHL3-205ENST00000607339 DCDC2BA2VCK2 349 aa9.5□□□□□ -0.89
UCHL3-205ENST00000607339 PIK3CDO00329 1044 aa9.5□□□□□ -0.89
UCHL3-205ENST00000607339 TNP2Q05952 138 aa9.5□□□□□ -0.89
UCHL3-205ENST00000607339 TEAD4Q15561 434 aa9.5□□□□□ -0.89
UCHL3-205ENST00000607339 ZNF358Q9NW07 568 aa9.5□□□□□ -0.89
UCHL3-205ENST00000607339 C2CD2LO14523 706 aa9.49□□□□□ -0.89
UCHL3-205ENST00000607339 SNRPNP63162 240 aaKnown RBP9.49□□□□□ -0.89
UCHL3-205ENST00000607339 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
UCHL3-205ENST00000607339 ZNF468Q5VIY5 522 aaPredicted RBP9.49□□□□□ -0.89
UCHL3-205ENST00000607339 ZNF295-AS1Q8N0V1 137 aa9.49□□□□□ -0.89
UCHL3-205ENST00000607339 MARK1Q9P0L2 795 aa9.49□□□□□ -0.89
UCHL3-205ENST00000607339 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
UCHL3-205ENST00000607339 BTBD6Q96KE9 485 aa9.48□□□□□ -0.89
UCHL3-205ENST00000607339 ZIC5Q96T25 663 aa9.48□□□□□ -0.89
UCHL3-205ENST00000607339 ZNF232Q9UNY5 417 aa9.48□□□□□ -0.89
UCHL3-205ENST00000607339 SPDYE3A6NKU9 549 aa9.47□□□□□ -0.89
UCHL3-205ENST00000607339 M0R2N6 131 aa9.47□□□□□ -0.89
UCHL3-205ENST00000607339 SERTM1A2A2V5 107 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 CD33P20138 364 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 ALAS2P22557 587 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 NOS2P35228 1153 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 DGKGP49619 791 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 PSMA6P60900 246 aaKnown RBP9.46□□□□□ -0.9
UCHL3-205ENST00000607339 GRIN2CQ14957 1233 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 HIF1AQ16665 826 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 C1orf229Q6ZS94 237 aaPredicted RBP9.46□□□□□ -0.9
UCHL3-205ENST00000607339 CHSY3Q70JA7 882 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 ANKIB1Q9P2G1 1089 aa9.46□□□□□ -0.9
UCHL3-205ENST00000607339 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
UCHL3-205ENST00000607339 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
UCHL3-205ENST00000607339 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
UCHL3-205ENST00000607339 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
UCHL3-205ENST00000607339 SLC9A9Q8IVB4 645 aa9.45□□□□□ -0.9
UCHL3-205ENST00000607339 LARGE2Q8N3Y3 721 aa9.45□□□□□ -0.9
UCHL3-205ENST00000607339 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
UCHL3-205ENST00000607339 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
UCHL3-205ENST00000607339 EFSO43281 561 aa9.44□□□□□ -0.9
UCHL3-205ENST00000607339 ATP9BO43861 1147 aa9.44□□□□□ -0.9
UCHL3-205ENST00000607339 HIRAP54198 1017 aaPredicted RBP9.44□□□□□ -0.9
UCHL3-205ENST00000607339 C1orf53Q5VUE5 145 aa9.44□□□□□ -0.9
UCHL3-205ENST00000607339 LINC00114Q6XXX2 140 aa9.44□□□□□ -0.9
UCHL3-205ENST00000607339 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
UCHL3-205ENST00000607339 EML1O00423 815 aa9.43□□□□□ -0.9
UCHL3-205ENST00000607339 PROCP04070 461 aa9.43□□□□□ -0.9
UCHL3-205ENST00000607339 EPHA4P54764 986 aa9.43□□□□□ -0.9
UCHL3-205ENST00000607339 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
UCHL3-205ENST00000607339 RHPN1Q8TCX5 695 aa9.43□□□□□ -0.9
UCHL3-205ENST00000607339 XP32Q5T750 250 aa9.42□□□□□ -0.9
UCHL3-205ENST00000607339 POM121Q96HA1 1249 aa9.42□□□□□ -0.9
UCHL3-205ENST00000607339 ELOA3CA0A087WX78 387 aaPredicted RBP9.41□□□□□ -0.9
UCHL3-205ENST00000607339 ELOA3DA6NLF2 546 aaPredicted RBP9.41□□□□□ -0.9
UCHL3-205ENST00000607339 ADAM23O75077 832 aa9.41□□□□□ -0.9
UCHL3-205ENST00000607339 SIN3BO75182 1162 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms