RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 IL13P35225 146 aa20.52■□□□□ 0.88
SSBP4-214ENST00000607020 RASSF7Q02833 373 aa20.52■□□□□ 0.88
SSBP4-214ENST00000607020 TTLL6Q8N841 843 aa20.52■□□□□ 0.88
SSBP4-214ENST00000607020 SERPINB2P05120 415 aa20.5■□□□□ 0.87
SSBP4-214ENST00000607020 BCL2L12Q9HB09 334 aa20.5■□□□□ 0.87
SSBP4-214ENST00000607020 MORC1Q86VD1 984 aa20.49■□□□□ 0.87
SSBP4-214ENST00000607020 VSIG10Q8N0Z9 540 aa20.49■□□□□ 0.87
SSBP4-214ENST00000607020 POLR3GLQ9BT43 218 aa20.49■□□□□ 0.87
SSBP4-214ENST00000607020 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
SSBP4-214ENST00000607020 POTECB2RU33 542 aa20.47■□□□□ 0.87
SSBP4-214ENST00000607020 RNMTO43148 476 aaKnown RBP20.47■□□□□ 0.87
SSBP4-214ENST00000607020 HSPA1AP0DMV8 641 aaKnown RBP20.47■□□□□ 0.87
SSBP4-214ENST00000607020 HSPA1BP0DMV9 641 aaKnown RBP20.47■□□□□ 0.87
SSBP4-214ENST00000607020 PCNTO95613 3336 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 ADAMTS7Q9UKP4 1686 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 H0YIN7 160 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 NFKBIEO00221 500 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 C2CD5Q86YS7 1000 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 PDZRN3Q9UPQ7 1066 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 COL15A1P39059 1388 aa20.46■□□□□ 0.87
SSBP4-214ENST00000607020 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
SSBP4-214ENST00000607020 CAPN15O75808 1086 aa20.45■□□□□ 0.86
SSBP4-214ENST00000607020 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
SSBP4-214ENST00000607020 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.86
SSBP4-214ENST00000607020 TJP1Q07157 1748 aa20.44■□□□□ 0.86
SSBP4-214ENST00000607020 EIF5P55010 431 aaKnown RBP20.43■□□□□ 0.86
SSBP4-214ENST00000607020 BRIP1Q9BX63 1249 aa20.42■□□□□ 0.86
SSBP4-214ENST00000607020 A0A087WZG4 1122 aa20.41■□□□□ 0.86
SSBP4-214ENST00000607020 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.866e-7■■□□□ 11.9
SSBP4-214ENST00000607020 MRC1P22897 1456 aa20.41■□□□□ 0.86
SSBP4-214ENST00000607020 SBF1O95248 1867 aa20.41■□□□□ 0.86
SSBP4-214ENST00000607020 STARD3NLO95772 234 aa20.4■□□□□ 0.86
SSBP4-214ENST00000607020 PCGF6Q9BYE7 350 aa20.4■□□□□ 0.86
SSBP4-214ENST00000607020 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.85
SSBP4-214ENST00000607020 LTBP3Q9NS15 1303 aa20.39■□□□□ 0.85
SSBP4-214ENST00000607020 HSPA5P11021 654 aaKnown RBP20.39■□□□□ 0.85
SSBP4-214ENST00000607020 PDE6BP35913 854 aa20.39■□□□□ 0.85
SSBP4-214ENST00000607020 CREBZFQ9NS37 354 aa20.39■□□□□ 0.85
SSBP4-214ENST00000607020 KNSTRNQ9Y448 316 aa20.39■□□□□ 0.85
SSBP4-214ENST00000607020 NRXN2Q9P2S2 1712 aa20.39■□□□□ 0.85
SSBP4-214ENST00000607020 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
SSBP4-214ENST00000607020 CANXP27824 592 aaKnown RBP20.38■□□□□ 0.85
SSBP4-214ENST00000607020 MTHFSDQ2M296 383 aaKnown RBP20.38■□□□□ 0.85
SSBP4-214ENST00000607020 ERFEQ4G0M1 354 aa20.38■□□□□ 0.85
SSBP4-214ENST00000607020 CHADLQ6NUI6 762 aa20.37■□□□□ 0.85
SSBP4-214ENST00000607020 C21orf2O43822 256 aa20.36■□□□□ 0.85
SSBP4-214ENST00000607020 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-214ENST00000607020 TBC1D9BQ66K14 1250 aa20.36■□□□□ 0.85
SSBP4-214ENST00000607020 BICDL1Q6ZP65 573 aa20.36■□□□□ 0.85
SSBP4-214ENST00000607020 ZNF622Q969S3 477 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSBP4-214ENST00000607020 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-214ENST00000607020 PRR5LQ6MZQ0 368 aa20.35■□□□□ 0.85
SSBP4-214ENST00000607020 HMOX1P09601 288 aa20.34■□□□□ 0.85
SSBP4-214ENST00000607020 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
SSBP4-214ENST00000607020 TTC5Q8N0Z6 440 aa20.33■□□□□ 0.85
SSBP4-214ENST00000607020 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
SSBP4-214ENST00000607020 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
SSBP4-214ENST00000607020 IL6STP40189 918 aaPredicted RBP20.32■□□□□ 0.84
SSBP4-214ENST00000607020 SOGA3Q5TF21 947 aa20.32■□□□□ 0.84
SSBP4-214ENST00000607020 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
SSBP4-214ENST00000607020 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
SSBP4-214ENST00000607020 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-214ENST00000607020 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
SSBP4-214ENST00000607020 DIAPH1O60610 1272 aaKnown RBP20.3■□□□□ 0.84
SSBP4-214ENST00000607020 SRGNP10124 158 aa20.3■□□□□ 0.84
SSBP4-214ENST00000607020 L3MBTL3Q96JM7 780 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-214ENST00000607020 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
SSBP4-214ENST00000607020 MKRN1Q9UHC7 482 aaKnown RBP20.3■□□□□ 0.84
SSBP4-214ENST00000607020 TBC1D2BQ9UPU7 963 aa20.3■□□□□ 0.84
SSBP4-214ENST00000607020 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
SSBP4-214ENST00000607020 AFDNP55196 1824 aaKnown RBP20.3■□□□□ 0.84
SSBP4-214ENST00000607020 PASKQ96RG2 1323 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 POTEIP0CG38 1075 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 POTEJP0CG39 1038 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-214ENST00000607020 CNTNAP1P78357 1384 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 DLEC1Q9Y238 1755 aa20.29■□□□□ 0.84
SSBP4-214ENST00000607020 CAMTA2O94983 1202 aa20.28■□□□□ 0.84
SSBP4-214ENST00000607020 LDHDQ86WU2 507 aa20.28■□□□□ 0.84
SSBP4-214ENST00000607020 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
SSBP4-214ENST00000607020 C7orf43Q8WVR3 580 aa20.28■□□□□ 0.84
SSBP4-214ENST00000607020 MASTLQ96GX5 879 aa20.28■□□□□ 0.84
SSBP4-214ENST00000607020 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
SSBP4-214ENST00000607020 CCDC24Q8N4L8 307 aa20.27■□□□□ 0.84
SSBP4-214ENST00000607020 FOXN1O15353 648 aa20.26■□□□□ 0.83
SSBP4-214ENST00000607020 TEFQ10587 303 aa20.26■□□□□ 0.83
SSBP4-214ENST00000607020 TAF1DQ9H5J8 278 aaPredicted RBP20.26■□□□□ 0.83
SSBP4-214ENST00000607020 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
SSBP4-214ENST00000607020 ST5P78524 1137 aa20.25■□□□□ 0.83
SSBP4-214ENST00000607020 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
SSBP4-214ENST00000607020 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
SSBP4-214ENST00000607020 KLRG2A4D1S0 409 aaPredicted RBP20.24■□□□□ 0.83
SSBP4-214ENST00000607020 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
SSBP4-214ENST00000607020 ITGBL1O95965 494 aaPredicted RBP20.24■□□□□ 0.83
SSBP4-214ENST00000607020 A1BGP04217 495 aa20.24■□□□□ 0.83
SSBP4-214ENST00000607020 CLEC4GQ6UXB4 293 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms