RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 ADGRB2O60241 1585 aa8.63□□□□□ -1.03
CDC40-207ENST00000606893 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
CDC40-207ENST00000606893 PSDA5PKW4 1024 aaPredicted RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 SLC4A2P04920 1241 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 RBM6P78332 1123 aaKnown RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 MSL1Q68DK7 614 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 DNAJC10Q8IXB1 793 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 ZBTB3Q9H5J0 574 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 KIF24Q5T7B8 1368 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 COL5A2P05997 1499 aaPredicted RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 MAP4K4O95819 1239 aaPredicted RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 TAF7Q15545 349 aaPredicted RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 ILDR2Q71H61 639 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 STK31Q9BXU1 1019 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 RWDD1Q9H446 243 aaPredicted RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 GPTP24298 496 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 SF3B2Q13435 895 aaKnown RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 VPS72Q15906 364 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 TBC1D2Q9BYX2 928 aa8.62□□□□□ -1.03
CDC40-207ENST00000606893 PHAXQ9H814 394 aaKnown RBP8.62□□□□□ -1.03
CDC40-207ENST00000606893 PLCB2Q00722 1185 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 PROSER3Q2NL68 480 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 PRDM4Q9UKN5 801 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 BLMP54132 1417 aaPredicted RBP8.61□□□□□ -1.03
CDC40-207ENST00000606893 RGPD2P0DJD1 1756 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 FKBP5Q13451 457 aaPredicted RBP8.61□□□□□ -1.03
CDC40-207ENST00000606893 G2E3Q7L622 706 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 CRB1P82279 1406 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 BCL9LQ86UU0 1499 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 BBXQ8WY36 941 aaPredicted RBP8.61□□□□□ -1.03
CDC40-207ENST00000606893 C22orf23Q9BZE7 217 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 PEAK1Q9H792 1746 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
CDC40-207ENST00000606893 CDK12Q9NYV4 1490 aaPredicted RBP8.6□□□□□ -1.03
CDC40-207ENST00000606893 OTUD7AQ8TE49 926 aaPredicted RBP8.6□□□□□ -1.03
CDC40-207ENST00000606893 CFAP44Q96MT7 982 aa8.6□□□□□ -1.03
CDC40-207ENST00000606893 CHPF2Q9P2E5 772 aa8.6□□□□□ -1.03
CDC40-207ENST00000606893 PCDH11XQ9BZA7 1347 aa8.6□□□□□ -1.03
CDC40-207ENST00000606893 PCDH11YQ9BZA8 1340 aa8.6□□□□□ -1.03
CDC40-207ENST00000606893 NCBP3Q53F19 620 aaKnown RBP8.6□□□□□ -1.03
CDC40-207ENST00000606893 IL16Q14005 1332 aa8.6□□□□□ -1.03
CDC40-207ENST00000606893 RTL1A6NKG5 1358 aa8.6□□□□□ -1.03
CDC40-207ENST00000606893 CT47B1P0C2W7 299 aaPredicted RBP8.59□□□□□ -1.03
CDC40-207ENST00000606893 ZNF790Q6PG37 636 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 KDM2BQ8NHM5 1336 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 MAP3K5Q99683 1374 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 KIF20BQ96Q89 1820 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 PDGFDQ9GZP0 370 aaPredicted RBP8.59□□□□□ -1.03
CDC40-207ENST00000606893 SLC52A2Q9HAB3 445 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 CCNL1Q9UK58 526 aaPredicted RBP8.59□□□□□ -1.03
CDC40-207ENST00000606893 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 MON2Q7Z3U7 1717 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 LTN1O94822 1766 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 AKAP12Q02952 1782 aa8.59□□□□□ -1.03
CDC40-207ENST00000606893 HTATSF1O43719 755 aaKnown RBP8.58□□□□□ -1.04
CDC40-207ENST00000606893 EZH2Q15910 746 aaKnown RBP8.58□□□□□ -1.04
CDC40-207ENST00000606893 HSCBQ8IWL3 235 aa8.58□□□□□ -1.04
CDC40-207ENST00000606893 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
CDC40-207ENST00000606893 COL16A1Q07092 1604 aaPredicted RBP8.58□□□□□ -1.04
CDC40-207ENST00000606893 ZNF219Q9P2Y4 722 aaPredicted RBP8.58□□□□□ -1.04
CDC40-207ENST00000606893 TOPAZ1Q8N9V7 1692 aa8.58□□□□□ -1.04
CDC40-207ENST00000606893 GNPATO15228 680 aa8.58□□□□□ -1.04
CDC40-207ENST00000606893 TFCP2L1Q9NZI6 479 aa8.58□□□□□ -1.04
CDC40-207ENST00000606893 NFAT5O94916 1531 aa8.58□□□□□ -1.04
CDC40-207ENST00000606893 CPDO75976 1380 aa8.57□□□□□ -1.04
CDC40-207ENST00000606893 MVPQ14764 893 aaKnown RBP8.57□□□□□ -1.04
CDC40-207ENST00000606893 ATG3Q9NT62 314 aa8.57□□□□□ -1.04
CDC40-207ENST00000606893 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
CDC40-207ENST00000606893 RILPL2Q969X0 211 aa8.57□□□□□ -1.04
CDC40-207ENST00000606893 KIF16BQ96L93 1317 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 KIF1AQ12756 1690 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 TRIM6-TRIM34B2RNG4 842 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 GTF2E1P29083 439 aaPredicted RBP8.56□□□□□ -1.04
CDC40-207ENST00000606893 COPS6Q7L5N1 327 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 ZBTB1Q9Y2K1 713 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 ZNF521Q96K83 1311 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 LOC102724428A0A0B4J2F2 783 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 CD2BP2O95400 341 aaKnown RBP8.56□□□□□ -1.04
CDC40-207ENST00000606893 SIK1P57059 783 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 RNF214Q8ND24 703 aa8.56□□□□□ -1.04
CDC40-207ENST00000606893 SRP68Q9UHB9 627 aaKnown RBP8.56□□□□□ -1.04
CDC40-207ENST00000606893 ATF7IPQ6VMQ6 1270 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 TTLL7Q6ZT98 887 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 EXOC6BQ9Y2D4 811 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 IQSEC2Q5JU85 1478 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 CWF19L2Q2TBE0 894 aaKnown RBP8.55□□□□□ -1.04
CDC40-207ENST00000606893 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 FAM196AQ6ZSG2 479 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 SYNE4Q8N205 404 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 XAGE3Q8WTP9 111 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 FMNL2Q96PY5 1086 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 SLC4A9Q96Q91 983 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 ZHX1Q9UKY1 873 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms