RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 USPL1Q5W0Q7 1092 aa18.3■□□□□ 0.52
CTSA-212ENST00000606394 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
CTSA-212ENST00000606394 RASSF7Q02833 373 aa18.29■□□□□ 0.52
CTSA-212ENST00000606394 TTLL6Q8N841 843 aa18.29■□□□□ 0.52
CTSA-212ENST00000606394 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
CTSA-212ENST00000606394 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
CTSA-212ENST00000606394 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
CTSA-212ENST00000606394 NFIXQ14938 502 aa18.27■□□□□ 0.52
CTSA-212ENST00000606394 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.51
CTSA-212ENST00000606394 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
CTSA-212ENST00000606394 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
CTSA-212ENST00000606394 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
CTSA-212ENST00000606394 SERPINB2P05120 415 aa18.25■□□□□ 0.51
CTSA-212ENST00000606394 CYP19A1P11511 503 aaPredicted RBP18.25■□□□□ 0.51
CTSA-212ENST00000606394 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
CTSA-212ENST00000606394 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
CTSA-212ENST00000606394 TIAM2Q8IVF5 1701 aa18.25■□□□□ 0.51
CTSA-212ENST00000606394 COL15A1P39059 1388 aa18.25■□□□□ 0.51
CTSA-212ENST00000606394 H0YIN7 160 aa18.24■□□□□ 0.51
CTSA-212ENST00000606394 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
CTSA-212ENST00000606394 SULT6B1Q6IMI4 303 aa18.24■□□□□ 0.51
CTSA-212ENST00000606394 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
CTSA-212ENST00000606394 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
CTSA-212ENST00000606394 POTECB2RU33 542 aa18.23■□□□□ 0.51
CTSA-212ENST00000606394 NFKBIEO00221 500 aa18.23■□□□□ 0.51
CTSA-212ENST00000606394 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
CTSA-212ENST00000606394 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
CTSA-212ENST00000606394 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
CTSA-212ENST00000606394 MRC1P22897 1456 aa18.22■□□□□ 0.51
CTSA-212ENST00000606394 CCDC88AQ3V6T2 1871 aa18.22■□□□□ 0.51
CTSA-212ENST00000606394 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
CTSA-212ENST00000606394 ZBTB1Q9Y2K1 713 aa18.2■□□□□ 0.5
CTSA-212ENST00000606394 IL13P35225 146 aa18.19■□□□□ 0.5
CTSA-212ENST00000606394 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
CTSA-212ENST00000606394 PANK3Q9H999 370 aa18.19■□□□□ 0.5
CTSA-212ENST00000606394 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
CTSA-212ENST00000606394 LTBP3Q9NS15 1303 aa18.19■□□□□ 0.5
CTSA-212ENST00000606394 A0A087WZG4 1122 aa18.18■□□□□ 0.5
CTSA-212ENST00000606394 PDE6BP35913 854 aa18.18■□□□□ 0.5
CTSA-212ENST00000606394 ERFEQ4G0M1 354 aa18.18■□□□□ 0.5
CTSA-212ENST00000606394 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
CTSA-212ENST00000606394 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
CTSA-212ENST00000606394 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
CTSA-212ENST00000606394 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
CTSA-212ENST00000606394 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
CTSA-212ENST00000606394 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
CTSA-212ENST00000606394 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
CTSA-212ENST00000606394 STARD3NLO95772 234 aa18.16■□□□□ 0.5
CTSA-212ENST00000606394 SLC39A6Q13433 755 aa18.16■□□□□ 0.5
CTSA-212ENST00000606394 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
CTSA-212ENST00000606394 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
CTSA-212ENST00000606394 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
CTSA-212ENST00000606394 C21orf2O43822 256 aa18.14■□□□□ 0.49
CTSA-212ENST00000606394 SOGA3Q5TF21 947 aa18.14■□□□□ 0.49
CTSA-212ENST00000606394 TAOK3Q9H2K8 898 aa18.14■□□□□ 0.49
CTSA-212ENST00000606394 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
CTSA-212ENST00000606394 IQCA1LA6NCM1 817 aa18.13■□□□□ 0.49
CTSA-212ENST00000606394 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
CTSA-212ENST00000606394 MKRN1Q9UHC7 482 aaKnown RBP18.13■□□□□ 0.49
CTSA-212ENST00000606394 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
CTSA-212ENST00000606394 CNTNAP1P78357 1384 aa18.13■□□□□ 0.49
CTSA-212ENST00000606394 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
CTSA-212ENST00000606394 CNKSR1Q969H4 720 aa18.12■□□□□ 0.49
CTSA-212ENST00000606394 TEX13AQ9BXU3 409 aaPredicted RBP18.12■□□□□ 0.49
CTSA-212ENST00000606394 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
CTSA-212ENST00000606394 TBC1D9BQ66K14 1250 aa18.11■□□□□ 0.49
CTSA-212ENST00000606394 PRR5LQ6MZQ0 368 aa18.11■□□□□ 0.49
CTSA-212ENST00000606394 LDHDQ86WU2 507 aa18.11■□□□□ 0.49
CTSA-212ENST00000606394 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
CTSA-212ENST00000606394 KNSTRNQ9Y448 316 aa18.11■□□□□ 0.49
CTSA-212ENST00000606394 PASKQ96RG2 1323 aa18.11■□□□□ 0.49
CTSA-212ENST00000606394 FOXN1O15353 648 aa18.1■□□□□ 0.49
CTSA-212ENST00000606394 STYK1Q6J9G0 422 aa18.1■□□□□ 0.49
CTSA-212ENST00000606394 L3MBTL3Q96JM7 780 aaPredicted RBP18.1■□□□□ 0.49
CTSA-212ENST00000606394 SCN4AP35499 1836 aa18.09■□□□□ 0.49
CTSA-212ENST00000606394 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
CTSA-212ENST00000606394 DDNO94850 711 aaPredicted RBP18.09■□□□□ 0.49
CTSA-212ENST00000606394 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
CTSA-212ENST00000606394 CTCFP49711 727 aaPredicted RBP18.09■□□□□ 0.49
CTSA-212ENST00000606394 EIF4G2P78344 907 aaKnown RBP eCLIP18.09■□□□□ 0.49
CTSA-212ENST00000606394 AIDAQ96BJ3 306 aa18.09■□□□□ 0.49
CTSA-212ENST00000606394 COL11A2P13942 1736 aaPredicted RBP18.09■□□□□ 0.49
CTSA-212ENST00000606394 POTEIP0CG38 1075 aa18.08■□□□□ 0.48
CTSA-212ENST00000606394 POTEJP0CG39 1038 aa18.08■□□□□ 0.48
CTSA-212ENST00000606394 MTHFSDQ2M296 383 aaKnown RBP18.08■□□□□ 0.48
CTSA-212ENST00000606394 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
CTSA-212ENST00000606394 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
CTSA-212ENST00000606394 SRGNP10124 158 aa18.07■□□□□ 0.48
CTSA-212ENST00000606394 PRPF40BQ6NWY9 871 aaKnown RBP18.07■□□□□ 0.48
CTSA-212ENST00000606394 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
CTSA-212ENST00000606394 MASTLQ96GX5 879 aa18.07■□□□□ 0.48
CTSA-212ENST00000606394 SETDB2Q96T68 719 aa18.07■□□□□ 0.48
CTSA-212ENST00000606394 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
CTSA-212ENST00000606394 HMOX1P09601 288 aa18.06■□□□□ 0.48
CTSA-212ENST00000606394 ST5P78524 1137 aa18.06■□□□□ 0.48
CTSA-212ENST00000606394 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
CTSA-212ENST00000606394 TAF1DQ9H5J8 278 aaPredicted RBP18.06■□□□□ 0.48
CTSA-212ENST00000606394 ARFGEF2Q9Y6D5 1785 aa18.06■□□□□ 0.48
CTSA-212ENST00000606394 SLX4Q8IY92 1834 aa18.05■□□□□ 0.48
CTSA-212ENST00000606394 NPHP1O15259 732 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms