RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
SRGAP2D-201ENST00000605551 NEFMP07197 916 aa12.09□□□□□ -0.47
SRGAP2D-201ENST00000605551 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
SRGAP2D-201ENST00000605551 HSPA6P17066 643 aa12.09□□□□□ -0.47
SRGAP2D-201ENST00000605551 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
SRGAP2D-201ENST00000605551 C16orf71Q8IYS4 520 aaPredicted RBP12.09□□□□□ -0.47
SRGAP2D-201ENST00000605551 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
SRGAP2D-201ENST00000605551 KCPQ6ZWJ8 1503 aa12.09□□□□□ -0.47
SRGAP2D-201ENST00000605551 UBR2Q8IWV8 1755 aa12.08□□□□□ -0.48
SRGAP2D-201ENST00000605551 POLRMTO00411 1230 aaKnown RBP12.08□□□□□ -0.48
SRGAP2D-201ENST00000605551 NPHP1O15259 732 aa12.08□□□□□ -0.48
SRGAP2D-201ENST00000605551 DDR1Q08345 913 aa12.08□□□□□ -0.48
SRGAP2D-201ENST00000605551 ZBTB1Q9Y2K1 713 aa12.08□□□□□ -0.48
SRGAP2D-201ENST00000605551 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.48
SRGAP2D-201ENST00000605551 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
SRGAP2D-201ENST00000605551 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
SRGAP2D-201ENST00000605551 RTF1Q92541 710 aaKnown RBP12.07□□□□□ -0.48
SRGAP2D-201ENST00000605551 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
SRGAP2D-201ENST00000605551 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
SRGAP2D-201ENST00000605551 C9orf131Q5VYM1 1079 aa12.06□□□□□ -0.48
SRGAP2D-201ENST00000605551 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
SRGAP2D-201ENST00000605551 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 TOMM70O94826 608 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 SERPINB2P05120 415 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 TM4SF1P30408 202 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 CHRNA5P30532 468 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 NFIXQ14938 502 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 RNF181Q9P0P0 153 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 PDZRN3Q9UPQ7 1066 aa12.05□□□□□ -0.48
SRGAP2D-201ENST00000605551 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
SRGAP2D-201ENST00000605551 BTBD11A6QL63 1104 aa12.04□□□□□ -0.48
SRGAP2D-201ENST00000605551 H0YIN7 160 aa12.04□□□□□ -0.48
SRGAP2D-201ENST00000605551 KIF3CO14782 793 aa12.04□□□□□ -0.48
SRGAP2D-201ENST00000605551 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
SRGAP2D-201ENST00000605551 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRGAP2D-201ENST00000605551 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
SRGAP2D-201ENST00000605551 SIPA1L3O60292 1781 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 IL6STP40189 918 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 APLP1P51693 650 aa12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 BICDL1Q6ZP65 573 aa12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 C2CD5Q86YS7 1000 aa12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 TTLL6Q8N841 843 aa12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 CARMIL3Q8ND23 1372 aa12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
SRGAP2D-201ENST00000605551 DLEC1Q9Y238 1755 aa12.02□□□□□ -0.48
SRGAP2D-201ENST00000605551 KCNA3P22001 575 aa12.02□□□□□ -0.49
SRGAP2D-201ENST00000605551 PDE6BP35913 854 aa12.02□□□□□ -0.49
SRGAP2D-201ENST00000605551 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
SRGAP2D-201ENST00000605551 ST5P78524 1137 aa12.02□□□□□ -0.49
SRGAP2D-201ENST00000605551 IL17REQ8NFR9 667 aa12.02□□□□□ -0.49
SRGAP2D-201ENST00000605551 ZNF652Q9Y2D9 606 aa12.02□□□□□ -0.49
SRGAP2D-201ENST00000605551 TNRC6CQ9HCJ0 1690 aaKnown RBP12.02□□□□□ -0.49
SRGAP2D-201ENST00000605551 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
SRGAP2D-201ENST00000605551 RSPH6AQ9H0K4 717 aa12.01□□□□□ -0.49
SRGAP2D-201ENST00000605551 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
SRGAP2D-201ENST00000605551 CEMIPQ8WUJ3 1361 aa12.01□□□□□ -0.49
SRGAP2D-201ENST00000605551 LMNB1P20700 586 aa12□□□□□ -0.49
SRGAP2D-201ENST00000605551 PPP2R1AP30153 589 aa12□□□□□ -0.49
SRGAP2D-201ENST00000605551 CNBD1Q8NA66 436 aa12□□□□□ -0.49
SRGAP2D-201ENST00000605551 ZNF622Q969S3 477 aaKnown RBP eCLIP12□□□□□ -0.49
SRGAP2D-201ENST00000605551 SETDB2Q96T68 719 aa12□□□□□ -0.49
SRGAP2D-201ENST00000605551 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
SRGAP2D-201ENST00000605551 SBF1O95248 1867 aa12□□□□□ -0.49
SRGAP2D-201ENST00000605551 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
SRGAP2D-201ENST00000605551 SNRPA1P09661 255 aaKnown RBP11.99□□□□□ -0.49
SRGAP2D-201ENST00000605551 FSTL1Q12841 308 aa11.99□□□□□ -0.49
SRGAP2D-201ENST00000605551 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
SRGAP2D-201ENST00000605551 BRIP1Q9BX63 1249 aa11.99□□□□□ -0.49
SRGAP2D-201ENST00000605551 PNNQ9H307 717 aaKnown RBP11.99□□□□□ -0.49
SRGAP2D-201ENST00000605551 TBC1D2BQ9UPU7 963 aa11.99□□□□□ -0.49
SRGAP2D-201ENST00000605551 SOGA3Q5TF21 947 aa11.98□□□□□ -0.49
SRGAP2D-201ENST00000605551 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
SRGAP2D-201ENST00000605551 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
SRGAP2D-201ENST00000605551 BCORQ6W2J9 1755 aa11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 RASSF7Q02833 373 aa11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 PRR5LQ6MZQ0 368 aa11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 DPY19L2Q6NUT2 758 aa11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 SMC1BQ8NDV3 1235 aa11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 CNKSR1Q969H4 720 aa11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 TIAM2Q8IVF5 1701 aa11.97□□□□□ -0.49
SRGAP2D-201ENST00000605551 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
SRGAP2D-201ENST00000605551 A1BGP04217 495 aa11.96□□□□□ -0.49
SRGAP2D-201ENST00000605551 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.49
SRGAP2D-201ENST00000605551 MCM10Q7L590 875 aa11.96□□□□□ -0.49
SRGAP2D-201ENST00000605551 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.49
SRGAP2D-201ENST00000605551 RRAGCQ9HB90 399 aa11.96□□□□□ -0.49
SRGAP2D-201ENST00000605551 CCDC88AQ3V6T2 1871 aa11.95□□□□□ -0.5
SRGAP2D-201ENST00000605551 WDR90Q96KV7 1748 aa11.95□□□□□ -0.5
SRGAP2D-201ENST00000605551 RGL2O15211 777 aa11.95□□□□□ -0.5
SRGAP2D-201ENST00000605551 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
SRGAP2D-201ENST00000605551 TAF7Q15545 349 aaPredicted RBP11.95□□□□□ -0.5
SRGAP2D-201ENST00000605551 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
SRGAP2D-201ENST00000605551 ANKRD31Q8N7Z5 1873 aa11.95□□□□□ -0.5
SRGAP2D-201ENST00000605551 GLTPD2A6NH11 291 aa11.94□□□□□ -0.5
SRGAP2D-201ENST00000605551 VEGFAP15692 232 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms