RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 KIAA0232Q92628 1395 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 NEXMIFQ5QGS0 1516 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 VPS37CA5D8V6 355 aaPredicted RBP14.85□□□□□ -0.03
CDCA3-212ENST00000604599 CKAP2LQ8IYA6 745 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 MORC2Q9Y6X9 1032 aaPredicted RBP14.85□□□□□ -0.03
CDCA3-212ENST00000604599 IRX5P78411 483 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-212ENST00000604599 RRS1Q15050 365 aaKnown RBP14.84□□□□□ -0.03
CDCA3-212ENST00000604599 TPD52L1Q16890 204 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-212ENST00000604599 G2E3Q7L622 706 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 TRIM5Q9C035 493 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.84□□□□□ -0.03
CDCA3-212ENST00000604599 MRVI1Q9Y6F6 885 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
CDCA3-212ENST00000604599 KIDINS220Q9ULH0 1771 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 PTPRMP28827 1452 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 PNMA6EA0A0J9YXQ4 647 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 TYRO3Q06418 890 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 ZSCAN25Q6NSZ9 544 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 CCDC83Q8IWF9 413 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 ASXL2Q76L83 1435 aa14.84□□□□□ -0.03
CDCA3-212ENST00000604599 KRT222Q8N1A0 295 aa14.83□□□□□ -0.03
CDCA3-212ENST00000604599 SNX14Q9Y5W7 946 aa14.83□□□□□ -0.03
CDCA3-212ENST00000604599 ABCA9Q8IUA7 1624 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 GNAI2P04899 355 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 GJB2P29033 226 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 MAP3K11Q16584 847 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 TTC14Q96N46 770 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 IL1RAPL2Q9NP60 686 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 LIMCH1Q9UPQ0 1083 aa14.83□□□□□ -0.04
CDCA3-212ENST00000604599 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
CDCA3-212ENST00000604599 IL17RAQ96F46 866 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 NUP62CLQ9H1M0 184 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 MTMR6Q9Y217 621 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 FRMPD1Q5SYB0 1578 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 UHRF1BP1LA0JNW5 1464 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 CCDC66A2RUB6 948 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 LIG1P18858 919 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 KMT5BQ4FZB7 885 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 ANO6Q4KMQ2 910 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 NME9Q86XW9 330 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 AEBP1Q8IUX7 1158 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 PAXBP1Q9Y5B6 917 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 CBX8Q9HC52 389 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 ST7Q9NRC1 585 aa14.82□□□□□ -0.04
CDCA3-212ENST00000604599 FAM173BQ6P4H8 233 aa14.81□□□□□ -0.04
CDCA3-212ENST00000604599 CACTINQ8WUQ7 758 aaKnown RBP14.81□□□□□ -0.04
CDCA3-212ENST00000604599 RAD50Q92878 1312 aa14.81□□□□□ -0.04
CDCA3-212ENST00000604599 CEP135Q66GS9 1140 aa14.81□□□□□ -0.04
CDCA3-212ENST00000604599 TTC6Q86TZ1 520 aa14.81□□□□□ -0.04
CDCA3-212ENST00000604599 FERMT3Q86UX7 667 aa14.81□□□□□ -0.04
CDCA3-212ENST00000604599 NUTM1Q86Y26 1132 aa14.81□□□□□ -0.04
CDCA3-212ENST00000604599 ZNF215Q9UL58 517 aaPredicted RBP14.81□□□□□ -0.04
CDCA3-212ENST00000604599 CHL1O00533 1208 aa14.8□□□□□ -0.04
CDCA3-212ENST00000604599 ZNF75DP51815 510 aa14.8□□□□□ -0.04
CDCA3-212ENST00000604599 RTF1Q92541 710 aaKnown RBP14.8□□□□□ -0.04
CDCA3-212ENST00000604599 CASTP20810 708 aaKnown RBP14.8□□□□□ -0.04
CDCA3-212ENST00000604599 ZNF397Q8NF99 534 aaPredicted RBP14.8□□□□□ -0.04
CDCA3-212ENST00000604599 CLTCQ00610 1675 aaKnown RBP14.8□□□□□ -0.04
CDCA3-212ENST00000604599 USP27XA6NNY8 438 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 CCDC144BQ3MJ40 725 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 CCDC144CPQ8IYA2 1237 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 TNMDQ9H2S6 317 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 CCT4P50991 539 aaKnown RBP14.79□□□□□ -0.04
CDCA3-212ENST00000604599 TIGD1Q96MW7 591 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
CDCA3-212ENST00000604599 FBXO38Q6PIJ6 1188 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 DDX54Q8TDD1 881 aaKnown RBP14.79□□□□□ -0.04
CDCA3-212ENST00000604599 DACT1Q9NYF0 836 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 STAP2Q9UGK3 403 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 SIGLEC1Q9BZZ2 1709 aa14.79□□□□□ -0.04
CDCA3-212ENST00000604599 NPHP1O15259 732 aa14.78□□□□□ -0.04
CDCA3-212ENST00000604599 ELF2Q15723 593 aa14.78□□□□□ -0.04
CDCA3-212ENST00000604599 PLA2G4DQ86XP0 818 aa14.78□□□□□ -0.04
CDCA3-212ENST00000604599 SGSM2O43147 1006 aa14.78□□□□□ -0.04
CDCA3-212ENST00000604599 ARID5BQ14865 1188 aa14.78□□□□□ -0.04
CDCA3-212ENST00000604599 SULT6B1Q6IMI4 303 aa14.78□□□□□ -0.04
CDCA3-212ENST00000604599 IDI1Q13907 227 aa14.77□□□□□ -0.04
CDCA3-212ENST00000604599 TRERF1Q96PN7 1200 aa14.77□□□□□ -0.04
CDCA3-212ENST00000604599 KRT85P78386 507 aa14.77□□□□□ -0.05
CDCA3-212ENST00000604599 CWC27Q6UX04 472 aaKnown RBP14.77□□□□□ -0.05
CDCA3-212ENST00000604599 NECAB1Q8N987 351 aa14.77□□□□□ -0.05
CDCA3-212ENST00000604599 LSG1Q9H089 658 aaKnown RBP14.77□□□□□ -0.05
CDCA3-212ENST00000604599 DNAJC25Q9H1X3 360 aa14.77□□□□□ -0.05
CDCA3-212ENST00000604599 HYPKQ9NX55 129 aa14.77□□□□□ -0.05
CDCA3-212ENST00000604599 RBM6P78332 1123 aaKnown RBP14.76□□□□□ -0.05
CDCA3-212ENST00000604599 IPO4Q8TEX9 1081 aaKnown RBP14.76□□□□□ -0.05
CDCA3-212ENST00000604599 POGZQ7Z3K3 1410 aa14.76□□□□□ -0.05
CDCA3-212ENST00000604599 ZNF165P49910 485 aa14.76□□□□□ -0.05
CDCA3-212ENST00000604599 LRRFIP2Q9Y608 721 aaKnown RBP14.76□□□□□ -0.05
CDCA3-212ENST00000604599 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
CDCA3-212ENST00000604599 HECW2Q9P2P5 1572 aa14.76□□□□□ -0.05
CDCA3-212ENST00000604599 GOLGA6L4A6NEF3 574 aa14.76□□□□□ -0.05
CDCA3-212ENST00000604599 CDC37L1Q7L3B6 337 aa14.76□□□□□ -0.05
CDCA3-212ENST00000604599 ATP8B2P98198 1209 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms