RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 SLC39A6Q13433 755 aa13.1□□□□□ -0.31
SRGAP2-210ENST00000604419 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
SRGAP2-210ENST00000604419 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
SRGAP2-210ENST00000604419 RNF181Q9P0P0 153 aa13.1□□□□□ -0.31
SRGAP2-210ENST00000604419 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
SRGAP2-210ENST00000604419 TEX13AQ9BXU3 409 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2-210ENST00000604419 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
SRGAP2-210ENST00000604419 ZC3H4Q9UPT8 1303 aaKnown RBP13.09□□□□□ -0.31
SRGAP2-210ENST00000604419 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
SRGAP2-210ENST00000604419 BRCA1P38398 1863 aaKnown RBP13.08□□□□□ -0.32
SRGAP2-210ENST00000604419 TJP1Q07157 1748 aa13.08□□□□□ -0.32
SRGAP2-210ENST00000604419 A0A087WZG4 1122 aa13.08□□□□□ -0.32
SRGAP2-210ENST00000604419 SERPINB2P05120 415 aa13.08□□□□□ -0.32
SRGAP2-210ENST00000604419 NFIXQ14938 502 aa13.08□□□□□ -0.32
SRGAP2-210ENST00000604419 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
SRGAP2-210ENST00000604419 COL15A1P39059 1388 aa13.07□□□□□ -0.32
SRGAP2-210ENST00000604419 TTLL6Q8N841 843 aa13.07□□□□□ -0.32
SRGAP2-210ENST00000604419 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
SRGAP2-210ENST00000604419 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
SRGAP2-210ENST00000604419 MRC1P22897 1456 aa13.07□□□□□ -0.32
SRGAP2-210ENST00000604419 H0YIN7 160 aa13.06□□□□□ -0.32
SRGAP2-210ENST00000604419 LMNB1P20700 586 aa13.06□□□□□ -0.32
SRGAP2-210ENST00000604419 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
SRGAP2-210ENST00000604419 TEFQ10587 303 aa13.06□□□□□ -0.32
SRGAP2-210ENST00000604419 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
SRGAP2-210ENST00000604419 RRAGCQ9HB90 399 aa13.06□□□□□ -0.32
SRGAP2-210ENST00000604419 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
SRGAP2-210ENST00000604419 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
SRGAP2-210ENST00000604419 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
SRGAP2-210ENST00000604419 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
SRGAP2-210ENST00000604419 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
SRGAP2-210ENST00000604419 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
SRGAP2-210ENST00000604419 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
SRGAP2-210ENST00000604419 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
SRGAP2-210ENST00000604419 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
SRGAP2-210ENST00000604419 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
SRGAP2-210ENST00000604419 GLTPD2A6NH11 291 aa13.03□□□□□ -0.32
SRGAP2-210ENST00000604419 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
SRGAP2-210ENST00000604419 VEGFAP15692 232 aaPredicted RBP13.03□□□□□ -0.32
SRGAP2-210ENST00000604419 PDE6BP35913 854 aa13.03□□□□□ -0.32
SRGAP2-210ENST00000604419 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
SRGAP2-210ENST00000604419 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
SRGAP2-210ENST00000604419 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
SRGAP2-210ENST00000604419 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
SRGAP2-210ENST00000604419 KLRG1Q96E93 195 aa13.02□□□□□ -0.33
SRGAP2-210ENST00000604419 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
SRGAP2-210ENST00000604419 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
SRGAP2-210ENST00000604419 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
SRGAP2-210ENST00000604419 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
SRGAP2-210ENST00000604419 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
SRGAP2-210ENST00000604419 HEG1Q9ULI3 1381 aa13.01□□□□□ -0.33
SRGAP2-210ENST00000604419 NRXN2Q9P2S2 1712 aa13□□□□□ -0.33
SRGAP2-210ENST00000604419 RASSF7Q02833 373 aa13□□□□□ -0.33
SRGAP2-210ENST00000604419 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
SRGAP2-210ENST00000604419 CFAP53Q96M91 514 aa13□□□□□ -0.33
SRGAP2-210ENST00000604419 SETDB2Q96T68 719 aa13□□□□□ -0.33
SRGAP2-210ENST00000604419 SBF1O95248 1867 aa12.99□□□□□ -0.33
SRGAP2-210ENST00000604419 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
SRGAP2-210ENST00000604419 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
SRGAP2-210ENST00000604419 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
SRGAP2-210ENST00000604419 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
SRGAP2-210ENST00000604419 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 NFKBIEO00221 500 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 A1BGP04217 495 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 PRELPP51888 382 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 PRR5LQ6MZQ0 368 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 CNKSR1Q969H4 720 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 ZNF330Q9Y3S2 320 aaPredicted RBP12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 UBR2Q8IWV8 1755 aa12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 TNRC6CQ9HCJ0 1690 aaKnown RBP12.98□□□□□ -0.33
SRGAP2-210ENST00000604419 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 NPHP1O15259 732 aa12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 HTRA3P83110 453 aa12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 PCNTO95613 3336 aa12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
SRGAP2-210ENST00000604419 C21orf2O43822 256 aa12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 CAMTA2O94983 1202 aa12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 ST5P78524 1137 aa12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 STYK1Q6J9G0 422 aa12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 CNBD1Q8NA66 436 aa12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 PHACTR3Q96KR7 559 aa12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 VIRMAQ69YN4 1812 aaKnown RBP12.96□□□□□ -0.33
SRGAP2-210ENST00000604419 LTBP3Q9NS15 1303 aa12.95□□□□□ -0.34
SRGAP2-210ENST00000604419 DLEC1Q9Y238 1755 aa12.95□□□□□ -0.34
SRGAP2-210ENST00000604419 RGL2O15211 777 aa12.95□□□□□ -0.34
SRGAP2-210ENST00000604419 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
SRGAP2-210ENST00000604419 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
SRGAP2-210ENST00000604419 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
SRGAP2-210ENST00000604419 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
SRGAP2-210ENST00000604419 HTATSF1O43719 755 aaKnown RBP12.94□□□□□ -0.34
SRGAP2-210ENST00000604419 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
SRGAP2-210ENST00000604419 SRGNP10124 158 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms