RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 TBC1D2Q9BYX2 928 aa18.65■□□□□ 0.58
CCDC12-211ENST00000604367 TTC5Q8N0Z6 440 aa18.65■□□□□ 0.58
CCDC12-211ENST00000604367 LRRCC1Q9C099 1032 aa18.65■□□□□ 0.58
CCDC12-211ENST00000604367 MYL6BP14649 208 aa18.64■□□□□ 0.58
CCDC12-211ENST00000604367 CABP4P57796 275 aa18.64■□□□□ 0.58
CCDC12-211ENST00000604367 KSR2Q6VAB6 950 aa18.64■□□□□ 0.58
CCDC12-211ENST00000604367 PPP1R42Q7Z4L9 355 aa18.64■□□□□ 0.58
CCDC12-211ENST00000604367 HYPKQ9NX55 129 aa18.64■□□□□ 0.58
CCDC12-211ENST00000604367 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCDC12-211ENST00000604367 PDIA6Q15084 440 aa18.63■□□□□ 0.57
CCDC12-211ENST00000604367 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
CCDC12-211ENST00000604367 COL5A2P05997 1499 aaPredicted RBP18.63■□□□□ 0.57
CCDC12-211ENST00000604367 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
CCDC12-211ENST00000604367 SDSP20132 328 aa18.63■□□□□ 0.57
CCDC12-211ENST00000604367 CWF19L2Q2TBE0 894 aaKnown RBP18.63■□□□□ 0.57
CCDC12-211ENST00000604367 SLKQ9H2G2 1235 aaPredicted RBP18.63■□□□□ 0.57
CCDC12-211ENST00000604367 IBTKQ9P2D0 1353 aaPredicted RBP18.62■□□□□ 0.57
CCDC12-211ENST00000604367 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
CCDC12-211ENST00000604367 EVA1CP58658 441 aa18.62■□□□□ 0.57
CCDC12-211ENST00000604367 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
CCDC12-211ENST00000604367 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
CCDC12-211ENST00000604367 PDE1AP54750 535 aa18.62■□□□□ 0.57
CCDC12-211ENST00000604367 ZCRB1Q8TBF4 217 aaKnown RBP18.62■□□□□ 0.57
CCDC12-211ENST00000604367 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
CCDC12-211ENST00000604367 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
CCDC12-211ENST00000604367 PKD1L3Q7Z443 1732 aa18.61■□□□□ 0.57
CCDC12-211ENST00000604367 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
CCDC12-211ENST00000604367 SSH3Q8TE77 659 aa18.61■□□□□ 0.57
CCDC12-211ENST00000604367 USP16Q9Y5T5 823 aa18.61■□□□□ 0.57
CCDC12-211ENST00000604367 SURF6O75683 361 aaKnown RBP18.61■□□□□ 0.57
CCDC12-211ENST00000604367 SPRYD3Q8NCJ5 442 aa18.61■□□□□ 0.57
CCDC12-211ENST00000604367 C5P01031 1676 aa18.6■□□□□ 0.57
CCDC12-211ENST00000604367 IL1RAPL2Q9NP60 686 aa18.6■□□□□ 0.57
CCDC12-211ENST00000604367 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
CCDC12-211ENST00000604367 DDX54Q8TDD1 881 aaKnown RBP18.6■□□□□ 0.57
CCDC12-211ENST00000604367 PCDH11XQ9BZA7 1347 aa18.59■□□□□ 0.57
CCDC12-211ENST00000604367 PCDH11YQ9BZA8 1340 aa18.59■□□□□ 0.57
CCDC12-211ENST00000604367 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
CCDC12-211ENST00000604367 RIC3Q7Z5B4 369 aa18.59■□□□□ 0.57
CCDC12-211ENST00000604367 IL2RBP14784 551 aa18.59■□□□□ 0.57
CCDC12-211ENST00000604367 FMNL2Q96PY5 1086 aa18.59■□□□□ 0.57
CCDC12-211ENST00000604367 PLEKHG2Q9H7P9 1386 aa18.58■□□□□ 0.57
CCDC12-211ENST00000604367 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.57
CCDC12-211ENST00000604367 CARD10Q9BWT7 1032 aa18.58■□□□□ 0.57
CCDC12-211ENST00000604367 ABCA3Q99758 1704 aa18.58■□□□□ 0.56
CCDC12-211ENST00000604367 ALDH1L1O75891 902 aa18.58■□□□□ 0.56
CCDC12-211ENST00000604367 MX1P20591 662 aa18.58■□□□□ 0.56
CCDC12-211ENST00000604367 POLA2Q14181 598 aa18.58■□□□□ 0.56
CCDC12-211ENST00000604367 NFKBIBQ15653 356 aa18.58■□□□□ 0.56
CCDC12-211ENST00000604367 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
CCDC12-211ENST00000604367 OSBPL3Q9H4L5 887 aa18.58■□□□□ 0.56
CCDC12-211ENST00000604367 MRC1P22897 1456 aa18.57■□□□□ 0.56
CCDC12-211ENST00000604367 LINS1Q8NG48 757 aa18.57■□□□□ 0.56
CCDC12-211ENST00000604367 NHSL1Q5SYE7 1610 aa18.56■□□□□ 0.56
CCDC12-211ENST00000604367 SALL3Q9BXA9 1300 aa18.56■□□□□ 0.56
CCDC12-211ENST00000604367 PARP4Q9UKK3 1724 aaKnown RBP18.56■□□□□ 0.56
CCDC12-211ENST00000604367 CASC1Q6TDU7 716 aa18.55■□□□□ 0.56
CCDC12-211ENST00000604367 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
CCDC12-211ENST00000604367 KIF2CQ99661 725 aa18.55■□□□□ 0.56
CCDC12-211ENST00000604367 GRM8O00222 908 aa18.54■□□□□ 0.56
CCDC12-211ENST00000604367 HSCBQ8IWL3 235 aa18.54■□□□□ 0.56
CCDC12-211ENST00000604367 BTG4Q9NY30 223 aa18.54■□□□□ 0.56
CCDC12-211ENST00000604367 RHPN1Q8TCX5 695 aa18.54■□□□□ 0.56
CCDC12-211ENST00000604367 RAB11FIP3O75154 756 aa18.53■□□□□ 0.56
CCDC12-211ENST00000604367 IGKV5-2P06315 115 aa18.53■□□□□ 0.56
CCDC12-211ENST00000604367 MYD88Q99836 296 aa18.53■□□□□ 0.56
CCDC12-211ENST00000604367 TRIM6-TRIM34B2RNG4 842 aa18.53■□□□□ 0.56
CCDC12-211ENST00000604367 NEXNQ0ZGT2 675 aa18.53■□□□□ 0.56
CCDC12-211ENST00000604367 OS9Q13438 667 aaPredicted RBP18.53■□□□□ 0.56
CCDC12-211ENST00000604367 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
CCDC12-211ENST00000604367 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
CCDC12-211ENST00000604367 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.55
CCDC12-211ENST00000604367 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.55
CCDC12-211ENST00000604367 RILPL2Q969X0 211 aa18.52■□□□□ 0.55
CCDC12-211ENST00000604367 KIF1BPQ96EK5 621 aa18.52■□□□□ 0.55
CCDC12-211ENST00000604367 SUCLG2Q96I99 432 aa18.52■□□□□ 0.55
CCDC12-211ENST00000604367 ANTXR1Q9H6X2 564 aa18.52■□□□□ 0.55
CCDC12-211ENST00000604367 PTCD1O75127 700 aaKnown RBP18.51■□□□□ 0.55
CCDC12-211ENST00000604367 PA2G4Q9UQ80 394 aaKnown RBP18.51■□□□□ 0.55
CCDC12-211ENST00000604367 NEURL1BA8MQ27 555 aa18.51■□□□□ 0.55
CCDC12-211ENST00000604367 ERVV-2B6SEH9 535 aa18.51■□□□□ 0.55
CCDC12-211ENST00000604367 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
CCDC12-211ENST00000604367 MTX1Q13505 466 aa18.5■□□□□ 0.55
CCDC12-211ENST00000604367 KAZALD1Q96I82 304 aa18.5■□□□□ 0.55
CCDC12-211ENST00000604367 METTL22Q9BUU2 404 aaPredicted RBP18.5■□□□□ 0.55
CCDC12-211ENST00000604367 USP26Q9BXU7 913 aa18.5■□□□□ 0.55
CCDC12-211ENST00000604367 BICC1Q9H694 974 aaKnown RBP18.5■□□□□ 0.55
CCDC12-211ENST00000604367 NKX1-1Q15270 411 aaPredicted RBP18.5■□□□□ 0.55
CCDC12-211ENST00000604367 STAP2Q9UGK3 403 aa18.5■□□□□ 0.55
CCDC12-211ENST00000604367 HDAC5Q9UQL6 1122 aa18.5■□□□□ 0.55
CCDC12-211ENST00000604367 EIF5BO60841 1220 aaKnown RBP18.49■□□□□ 0.55
CCDC12-211ENST00000604367 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
CCDC12-211ENST00000604367 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
CCDC12-211ENST00000604367 CD2BP2O95400 341 aaKnown RBP18.48■□□□□ 0.55
CCDC12-211ENST00000604367 GCKRQ14397 625 aa18.48■□□□□ 0.55
CCDC12-211ENST00000604367 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
CCDC12-211ENST00000604367 SNX21Q969T3 373 aa18.48■□□□□ 0.55
CCDC12-211ENST00000604367 UTYO14607 1347 aa18.48■□□□□ 0.55
CCDC12-211ENST00000604367 ERC2O15083 957 aa18.48■□□□□ 0.55
CCDC12-211ENST00000604367 MAP4K4O95819 1239 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms