RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 FMNL2Q96PY5 1086 aa24.08■■□□□ 1.45
CCDC12-208ENST00000603885 TEX13AQ9BXU3 409 aaPredicted RBP24.08■■□□□ 1.45
CCDC12-208ENST00000603885 HTATSF1O43719 755 aaKnown RBP24.07■■□□□ 1.44
CCDC12-208ENST00000603885 MCM10Q7L590 875 aa24.07■■□□□ 1.44
CCDC12-208ENST00000603885 ZNF784Q8NCA9 323 aaPredicted RBP24.07■■□□□ 1.44
CCDC12-208ENST00000603885 USPL1Q5W0Q7 1092 aa24.06■■□□□ 1.44
CCDC12-208ENST00000603885 PXDNLA1KZ92 1463 aa24.06■■□□□ 1.44
CCDC12-208ENST00000603885 CANXP27824 592 aaKnown RBP24.05■■□□□ 1.44
CCDC12-208ENST00000603885 TGFB2P61812 414 aa24.05■■□□□ 1.44
CCDC12-208ENST00000603885 NARFQ9UHQ1 456 aa24.05■■□□□ 1.44
CCDC12-208ENST00000603885 WWC3Q9ULE0 1092 aa24.05■■□□□ 1.44
CCDC12-208ENST00000603885 KCNQ3O43525 872 aa24.03■■□□□ 1.44
CCDC12-208ENST00000603885 DDR1Q08345 913 aa24.03■■□□□ 1.44
CCDC12-208ENST00000603885 DCTN1Q14203 1278 aa24.03■■□□□ 1.44
CCDC12-208ENST00000603885 PNNQ9H307 717 aaKnown RBP24.03■■□□□ 1.44
CCDC12-208ENST00000603885 KIAA1551Q9HCM1 1747 aa24.02■■□□□ 1.44
CCDC12-208ENST00000603885 A0A087WZG4 1122 aa24.01■■□□□ 1.43
CCDC12-208ENST00000603885 TM4SF1P30408 202 aa24.01■■□□□ 1.43
CCDC12-208ENST00000603885 EIF5P55010 431 aaKnown RBP24.01■■□□□ 1.43
CCDC12-208ENST00000603885 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
CCDC12-208ENST00000603885 N4BP2Q86UW6 1770 aaPredicted RBP24.01■■□□□ 1.43
CCDC12-208ENST00000603885 A0A0G2JLW4 131 aa24■■□□□ 1.43
CCDC12-208ENST00000603885 MAPK8IP3Q9UPT6 1336 aa24■■□□□ 1.43
CCDC12-208ENST00000603885 POLRMTO00411 1230 aaKnown RBP23.99■■□□□ 1.43
CCDC12-208ENST00000603885 MYBBP1AQ9BQG0 1328 aaKnown RBP23.99■■□□□ 1.43
CCDC12-208ENST00000603885 DLG5Q8TDM6 1919 aa23.98■■□□□ 1.43
CCDC12-208ENST00000603885 DPEP1P16444 411 aa23.98■■□□□ 1.43
CCDC12-208ENST00000603885 IL6STP40189 918 aaPredicted RBP23.98■■□□□ 1.43
CCDC12-208ENST00000603885 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
CCDC12-208ENST00000603885 NFE2L2Q16236 605 aa23.98■■□□□ 1.43
CCDC12-208ENST00000603885 NFIXQ14938 502 aa23.97■■□□□ 1.43
CCDC12-208ENST00000603885 NPM2Q86SE8 214 aaKnown RBP23.97■■□□□ 1.43
CCDC12-208ENST00000603885 BCL2L12Q9HB09 334 aa23.97■■□□□ 1.43
CCDC12-208ENST00000603885 ZNF330Q9Y3S2 320 aaPredicted RBP23.97■■□□□ 1.43
CCDC12-208ENST00000603885 A1BGP04217 495 aa23.96■■□□□ 1.43
CCDC12-208ENST00000603885 SNRPA1P09661 255 aaKnown RBP23.96■■□□□ 1.43
CCDC12-208ENST00000603885 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
CCDC12-208ENST00000603885 USP16Q9Y5T5 823 aa23.94■■□□□ 1.42
CCDC12-208ENST00000603885 SCN7AQ01118 1682 aa23.93■■□□□ 1.42
CCDC12-208ENST00000603885 PNISRQ8TF01 805 aaKnown RBP23.93■■□□□ 1.42
CCDC12-208ENST00000603885 TBC1D2BQ9UPU7 963 aa23.93■■□□□ 1.42
CCDC12-208ENST00000603885 BRCA1P38398 1863 aaKnown RBP23.92■■□□□ 1.42
CCDC12-208ENST00000603885 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
CCDC12-208ENST00000603885 SERPINB2P05120 415 aa23.92■■□□□ 1.42
CCDC12-208ENST00000603885 AFDNP55196 1824 aaKnown RBP23.91■■□□□ 1.42
CCDC12-208ENST00000603885 NRXN2Q9P2S2 1712 aa23.91■■□□□ 1.42
CCDC12-208ENST00000603885 KCNA3P22001 575 aa23.91■■□□□ 1.42
CCDC12-208ENST00000603885 MIS18AQ9NYP9 233 aa23.91■■□□□ 1.42
CCDC12-208ENST00000603885 PIM2Q9P1W9 311 aa23.91■■□□□ 1.42
CCDC12-208ENST00000603885 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
CCDC12-208ENST00000603885 BICDL1Q6ZP65 573 aa23.9■■□□□ 1.42
CCDC12-208ENST00000603885 THUMPD2Q9BTF0 503 aaKnown RBP23.89■■□□□ 1.41
CCDC12-208ENST00000603885 KDM3BQ7LBC6 1761 aa23.88■■□□□ 1.41
CCDC12-208ENST00000603885 ATP10DQ9P241 1426 aa23.88■■□□□ 1.41
CCDC12-208ENST00000603885 CHRNA5P30532 468 aa23.88■■□□□ 1.41
CCDC12-208ENST00000603885 PIP4K2AP48426 406 aaPredicted RBP23.88■■□□□ 1.41
CCDC12-208ENST00000603885 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
CCDC12-208ENST00000603885 DZIP3Q86Y13 1208 aaKnown RBP23.88■■□□□ 1.41
CCDC12-208ENST00000603885 ADCY9O60503 1353 aa23.88■■□□□ 1.41
CCDC12-208ENST00000603885 CAMTA2O94983 1202 aa23.87■■□□□ 1.41
CCDC12-208ENST00000603885 WDR43Q15061 677 aaKnown RBP eCLIP23.87■■□□□ 1.41
CCDC12-208ENST00000603885 DALRD3Q5D0E6 543 aaKnown RBP23.87■■□□□ 1.41
CCDC12-208ENST00000603885 RIPK4P57078 832 aa23.86■■□□□ 1.41
CCDC12-208ENST00000603885 ARHGAP27Q6ZUM4 889 aa23.86■■□□□ 1.41
CCDC12-208ENST00000603885 PRKRIP1Q9H875 184 aaPredicted RBP23.86■■□□□ 1.41
CCDC12-208ENST00000603885 CARMIL3Q8ND23 1372 aa23.86■■□□□ 1.41
CCDC12-208ENST00000603885 ARFGEF1Q9Y6D6 1849 aa23.86■■□□□ 1.41
CCDC12-208ENST00000603885 LAMB4A4D0S4 1761 aa23.86■■□□□ 1.41
CCDC12-208ENST00000603885 BCORQ6W2J9 1755 aa23.86■■□□□ 1.41
CCDC12-208ENST00000603885 LMOD3Q0VAK6 560 aa23.85■■□□□ 1.41
CCDC12-208ENST00000603885 GIGYF1O75420 1035 aaPredicted RBP23.84■■□□□ 1.41
CCDC12-208ENST00000603885 TMPOP42166 694 aaKnown RBP23.84■■□□□ 1.41
CCDC12-208ENST00000603885 NBPF26B4DH59 902 aa23.83■■□□□ 1.41
CCDC12-208ENST00000603885 EIF4A1P60842 406 aaKnown RBP23.83■■□□□ 1.41
CCDC12-208ENST00000603885 NBPF10Q6P3W6 841 aaKnown RBP23.83■■□□□ 1.41
CCDC12-208ENST00000603885 NBPF15Q8N660 670 aa23.83■■□□□ 1.41
CCDC12-208ENST00000603885 SETDB2Q96T68 719 aa23.83■■□□□ 1.41
CCDC12-208ENST00000603885 CCDC146Q8IYE0 955 aa23.82■■□□□ 1.4
CCDC12-208ENST00000603885 ZNF652Q9Y2D9 606 aa23.82■■□□□ 1.4
CCDC12-208ENST00000603885 CLEC4GQ6UXB4 293 aa23.81■■□□□ 1.4
CCDC12-208ENST00000603885 TSPYL4Q9UJ04 414 aa23.81■■□□□ 1.4
CCDC12-208ENST00000603885 H0YIN7 160 aa23.8■■□□□ 1.4
CCDC12-208ENST00000603885 PRR5LQ6MZQ0 368 aa23.8■■□□□ 1.4
CCDC12-208ENST00000603885 C2CD5Q86YS7 1000 aa23.8■■□□□ 1.4
CCDC12-208ENST00000603885 RUNDC1Q96C34 613 aa23.8■■□□□ 1.4
CCDC12-208ENST00000603885 GPBP1L1Q9HC44 474 aaPredicted RBP23.8■■□□□ 1.4
CCDC12-208ENST00000603885 DLEC1Q9Y238 1755 aa23.8■■□□□ 1.4
CCDC12-208ENST00000603885 RGL2O15211 777 aa23.79■■□□□ 1.4
CCDC12-208ENST00000603885 NPHP1O15259 732 aa23.79■■□□□ 1.4
CCDC12-208ENST00000603885 CNBD1Q8NA66 436 aa23.79■■□□□ 1.4
CCDC12-208ENST00000603885 BRIP1Q9BX63 1249 aa23.79■■□□□ 1.4
CCDC12-208ENST00000603885 RRP7AQ9Y3A4 280 aaKnown RBP23.79■■□□□ 1.4
CCDC12-208ENST00000603885 PDE6BP35913 854 aa23.78■■□□□ 1.4
CCDC12-208ENST00000603885 C1QTNF8P60827 252 aa23.78■■□□□ 1.4
CCDC12-208ENST00000603885 NEUROD2Q15784 382 aa23.78■■□□□ 1.4
CCDC12-208ENST00000603885 ZNF526Q8TF50 670 aaPredicted RBP23.78■■□□□ 1.4
CCDC12-208ENST00000603885 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
CCDC12-208ENST00000603885 ADAMTS8Q9UP79 889 aa23.78■■□□□ 1.4
CCDC12-208ENST00000603885 PDZRN3Q9UPQ7 1066 aa23.78■■□□□ 1.4
CCDC12-208ENST00000603885 ANKRD31Q8N7Z5 1873 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms