RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ZCRB1Q8TBF4 217 aaKnown RBP5.76□□□□□ -1.49
LINC01109-201ENST00000603837 TPX2Q9ULW0 747 aaKnown RBP5.76□□□□□ -1.49
LINC01109-201ENST00000603837 GCGRP47871 477 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 HDAC1Q13547 482 aaPredicted RBP5.76□□□□□ -1.49
LINC01109-201ENST00000603837 TXNDC2Q86VQ3 553 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 PROSER2Q86WR7 435 aaPredicted RBP5.76□□□□□ -1.49
LINC01109-201ENST00000603837 BORCS6Q96GS4 357 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 TIGD1Q96MW7 591 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 PRR14Q9BWN1 585 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 CHPF2Q9P2E5 772 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 KDM5BQ9UGL1 1544 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 ERICH4A6NGS2 130 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 CCDC173Q0VFZ6 552 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 NEXNQ0ZGT2 675 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 WWC3Q9ULE0 1092 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 RFX1P22670 979 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 PSME1Q06323 249 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 C9orf131Q5VYM1 1079 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 SMC5Q8IY18 1101 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 SLKQ9H2G2 1235 aaPredicted RBP5.75□□□□□ -1.49
LINC01109-201ENST00000603837 PLSCR2Q9NRY7 297 aa5.75□□□□□ -1.49
LINC01109-201ENST00000603837 A6NJR5 290 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 TAGLNQ01995 201 aaKnown RBP5.74□□□□□ -1.49
LINC01109-201ENST00000603837 ATP2B3Q16720 1220 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 TTC30AQ86WT1 665 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 MSL3Q8N5Y2 521 aaKnown RBP5.74□□□□□ -1.49
LINC01109-201ENST00000603837 EXOC6Q8TAG9 804 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 PDZRN3Q9UPQ7 1066 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 MLECQ14165 292 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 MCM6Q14566 821 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 PUS10Q3MIT2 529 aaKnown RBP5.74□□□□□ -1.49
LINC01109-201ENST00000603837 DUSP27Q5VZP5 1158 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 NUTM1Q86Y26 1132 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 UBA5Q9GZZ9 404 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 EFCC1Q9HA90 598 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 SERPINA10Q9UK55 444 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 KIF3AQ9Y496 699 aa5.74□□□□□ -1.49
LINC01109-201ENST00000603837 NBPF6Q5VWK0 638 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 SND1Q7KZF4 910 aaKnown RBP eCLIP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 NBPF5PQ86XG9 351 aaPredicted RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 CCDC146Q8IYE0 955 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 NBPF4Q96M43 638 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 CASKIN1Q8WXD9 1431 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 GCC2Q8IWJ2 1684 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 SETD1BQ9UPS6 1966 aaKnown RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 ACTN4O43707 911 aaKnown RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 NAT2P11245 290 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 CAPN2P17655 700 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 MCM4P33991 863 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 FUT2Q10981 343 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 FLIIQ13045 1269 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 NAALADL2Q58DX5 795 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 NEUROD6Q96NK8 337 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 FBXO9Q9UK97 447 aaPredicted RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 PPRC1Q5VV67 1664 aaKnown RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 DYTNA2CJ06 578 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 NRDCO43847 1150 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 MCCD1P59942 119 aaPredicted RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 MTA1Q13330 715 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 HSCBQ8IWL3 235 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 LARGE2Q8N3Y3 721 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 CALR3Q96L12 384 aaKnown RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 MRS2Q9HD23 443 aa5.73□□□□□ -1.49
LINC01109-201ENST00000603837 MAGEC2Q9UBF1 373 aaPredicted RBP5.73□□□□□ -1.49
LINC01109-201ENST00000603837 RAB3GAP2Q9H2M9 1393 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 PLB1Q6P1J6 1458 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 UGGT2Q9NYU1 1516 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 CFAP69A5D8W1 941 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 TULP2O00295 520 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 IGHDP01880 384 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 TNNT3P45378 269 aaPredicted RBP5.72□□□□□ -1.49
LINC01109-201ENST00000603837 XPCQ01831 940 aaPredicted RBP5.72□□□□□ -1.49
LINC01109-201ENST00000603837 NOM1Q5C9Z4 860 aaKnown RBP5.72□□□□□ -1.49
LINC01109-201ENST00000603837 FNBP4Q8N3X1 1017 aaPredicted RBP5.72□□□□□ -1.49
LINC01109-201ENST00000603837 C1orf131Q8NDD1 294 aaKnown RBP5.72□□□□□ -1.49
LINC01109-201ENST00000603837 ACRBPQ8NEB7 543 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 PPP1R9BQ96SB3 815 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 MYCBPQ99417 103 aaPredicted RBP5.72□□□□□ -1.49
LINC01109-201ENST00000603837 PCDHB3Q9Y5E6 796 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 SETD5Q9C0A6 1442 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 TEX14Q8IWB6 1497 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 USP5P45974 858 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 MRVI1Q9Y6F6 885 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 ADCY10Q96PN6 1610 aa5.72□□□□□ -1.49
LINC01109-201ENST00000603837 POLR1AO95602 1720 aaPredicted RBP5.72□□□□□ -1.49
LINC01109-201ENST00000603837 ZNF16P17020 682 aaPredicted RBP5.71□□□□□ -1.49
LINC01109-201ENST00000603837 ATP6V1AP38606 617 aa5.71□□□□□ -1.49
LINC01109-201ENST00000603837 SATB1Q01826 763 aa5.71□□□□□ -1.49
LINC01109-201ENST00000603837 DIXDC1Q155Q3 683 aa5.71□□□□□ -1.49
LINC01109-201ENST00000603837 ANKRD23Q86SG2 305 aa5.71□□□□□ -1.49
LINC01109-201ENST00000603837 hCG_2014768A0A024R1R8 64 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 USP46P62068 366 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 HECW1Q76N89 1606 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 SPIRE2Q8WWL2 714 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 CALCOCO1Q9P1Z2 691 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 CEP83Q9Y592 693 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 PTPN23Q9H3S7 1636 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 EXOC5O00471 708 aa5.71□□□□□ -1.5
LINC01109-201ENST00000603837 U2AF1L5P0DN76 240 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms