RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 FBXO22Q8NEZ5 403 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 CRISPLD2Q9H0B8 497 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 PASKQ96RG2 1323 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 CACNA1FO60840 1977 aa4.12□□□□□ -1.75
VCAM1-205ENST00000603679 ESCO1Q5FWF5 840 aa4.12□□□□□ -1.75
VCAM1-205ENST00000603679 HHIPL1Q96JK4 782 aa4.12□□□□□ -1.75
VCAM1-205ENST00000603679 CAPN2P17655 700 aa4.12□□□□□ -1.75
VCAM1-205ENST00000603679 DDX17Q92841 729 aaKnown RBP4.12□□□□□ -1.75
VCAM1-205ENST00000603679 AKAP11Q9UKA4 1901 aa4.12□□□□□ -1.75
VCAM1-205ENST00000603679 FRMPD3Q5JV73 1810 aa4.12□□□□□ -1.75
VCAM1-205ENST00000603679 SH3D19Q5HYK7 790 aa4.12□□□□□ -1.75
VCAM1-205ENST00000603679 SPDYE1Q8NFV5 336 aaPredicted RBP4.12□□□□□ -1.75
VCAM1-205ENST00000603679 PPP1R37O75864 691 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 ZEB1P37275 1124 aaPredicted RBP4.11□□□□□ -1.75
VCAM1-205ENST00000603679 RETREG2Q8NC44 543 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 FBXW7Q969H0 707 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 KLRG1Q96E93 195 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 DCAF5Q96JK2 942 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 SSFA2P28290 1259 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 ZNF579Q8NAF0 562 aaKnown RBP4.11□□□□□ -1.75
VCAM1-205ENST00000603679 PLSCR2Q9NRY7 297 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 ACEP12821 1306 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 IRF6O14896 467 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 GPR37O15354 613 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 IRX6P78412 446 aaPredicted RBP4.11□□□□□ -1.75
VCAM1-205ENST00000603679 R3HDM1Q15032 1099 aaKnown RBP4.11□□□□□ -1.75
VCAM1-205ENST00000603679 TXNRD1Q16881 649 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 CFHR5Q9BXR6 569 aa4.11□□□□□ -1.75
VCAM1-205ENST00000603679 PSEN1P49768 467 aa4.1□□□□□ -1.75
VCAM1-205ENST00000603679 NUDT16Q96DE0 195 aaKnown RBP4.1□□□□□ -1.75
VCAM1-205ENST00000603679 CEMIPQ8WUJ3 1361 aa4.1□□□□□ -1.75
VCAM1-205ENST00000603679 BRD1O95696 1058 aa4.1□□□□□ -1.75
VCAM1-205ENST00000603679 MLLT3P42568 568 aaPredicted RBP4.1□□□□□ -1.75
VCAM1-205ENST00000603679 NLRP13Q86W25 1043 aa4.1□□□□□ -1.75
VCAM1-205ENST00000603679 PARP9Q8IXQ6 854 aa4.1□□□□□ -1.75
VCAM1-205ENST00000603679 COL11A1P12107 1806 aaPredicted RBP4.1□□□□□ -1.75
VCAM1-205ENST00000603679 GCP02774 474 aa4.1□□□□□ -1.75
VCAM1-205ENST00000603679 CANXP27824 592 aaKnown RBP4.1□□□□□ -1.75
VCAM1-205ENST00000603679 IRF5Q13568 498 aa4.1□□□□□ -1.75
VCAM1-205ENST00000603679 GIGYF1O75420 1035 aaPredicted RBP4.09□□□□□ -1.75
VCAM1-205ENST00000603679 ZNF827Q17R98 1081 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 FOXD4L5Q5VV16 416 aaPredicted RBP4.09□□□□□ -1.75
VCAM1-205ENST00000603679 BANK1Q8NDB2 785 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 FOXD4L4Q8WXT5 416 aaPredicted RBP4.09□□□□□ -1.75
VCAM1-205ENST00000603679 CHMP4AQ9BY43 222 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 USTQ9Y2C2 406 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 OTOFQ9HC10 1997 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 TTC21BQ7Z4L5 1316 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 KLRG2A4D1S0 409 aaPredicted RBP4.09□□□□□ -1.75
VCAM1-205ENST00000603679 SPDYE5A6NIY4 337 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 FOXO3O43524 673 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 FAM98CQ17RN3 349 aaKnown RBP4.09□□□□□ -1.75
VCAM1-205ENST00000603679 CCDC102AQ96A19 550 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 L3MBTL3Q96JM7 780 aaPredicted RBP4.09□□□□□ -1.75
VCAM1-205ENST00000603679 MYH3P11055 1940 aa4.09□□□□□ -1.75
VCAM1-205ENST00000603679 WWC1Q8IX03 1113 aa4.09□□□□□ -1.76
VCAM1-205ENST00000603679 PRAM1Q96QH2 718 aa4.09□□□□□ -1.76
VCAM1-205ENST00000603679 STK32BQ9NY57 414 aa4.09□□□□□ -1.76
VCAM1-205ENST00000603679 COL1A1P02452 1464 aaPredicted RBP4.08□□□□□ -1.76
VCAM1-205ENST00000603679 TOMM70O94826 608 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 ADAMTS2O95450 1211 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 WAPLQ7Z5K2 1190 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 FHDC1Q9C0D6 1143 aaPredicted RBP4.08□□□□□ -1.76
VCAM1-205ENST00000603679 CNTNAP1P78357 1384 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 LOC285556D6RIA3 1793 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 YBX3P16989 372 aaKnown RBP eCLIP4.08□□□□□ -1.76
VCAM1-205ENST00000603679 SKIV2LQ15477 1246 aaKnown RBP4.08□□□□□ -1.76
VCAM1-205ENST00000603679 RBM42Q9BTD8 480 aaKnown RBP4.08□□□□□ -1.76
VCAM1-205ENST00000603679 MGAMO43451 1857 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 APBA3O96018 575 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 KCNA3P22001 575 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 LARP1Q6PKG0 1096 aaKnown RBP4.08□□□□□ -1.76
VCAM1-205ENST00000603679 VPS33BQ9H267 617 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 LRRC4BQ9NT99 713 aa4.08□□□□□ -1.76
VCAM1-205ENST00000603679 IP6K1Q92551 441 aa4.07□□□□□ -1.76
VCAM1-205ENST00000603679 PDIA6Q15084 440 aa4.07□□□□□ -1.76
VCAM1-205ENST00000603679 PRR29P0C7W0 189 aa4.07□□□□□ -1.76
VCAM1-205ENST00000603679 PGAP2Q9UHJ9 254 aa4.07□□□□□ -1.76
VCAM1-205ENST00000603679 CASP8AP2Q9UKL3 1982 aa4.06□□□□□ -1.76
VCAM1-205ENST00000603679 FOCADQ5VW36 1801 aa4.06□□□□□ -1.76
VCAM1-205ENST00000603679 GNPATO15228 680 aa4.06□□□□□ -1.76
VCAM1-205ENST00000603679 TRIM37O94972 964 aa4.06□□□□□ -1.76
VCAM1-205ENST00000603679 KAT6BQ8WYB5 2073 aa4.06□□□□□ -1.76
VCAM1-205ENST00000603679 CDHR2Q9BYE9 1310 aa4.06□□□□□ -1.76
VCAM1-205ENST00000603679 LTBP2Q14767 1821 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 DDB1Q16531 1140 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 GRIPAP1Q4V328 841 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 USP35Q9P2H5 1018 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 DDX60LQ5H9U9 1706 aaKnown RBP4.05□□□□□ -1.76
VCAM1-205ENST00000603679 HIC1Q14526 733 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 COG6Q9Y2V7 657 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 ZNF330Q9Y3S2 320 aaPredicted RBP4.05□□□□□ -1.76
VCAM1-205ENST00000603679 ALPK3Q96L96 1907 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 PHIPQ8WWQ0 1821 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 FCHSD2O94868 740 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 CDK19Q9BWU1 502 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 AXIN2Q9Y2T1 843 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 CENPJQ9HC77 1338 aaPredicted RBP4.05□□□□□ -1.76
VCAM1-205ENST00000603679 USP47Q96K76 1375 aa4.05□□□□□ -1.76
VCAM1-205ENST00000603679 RASSF10A6NK89 507 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms