RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.29
DDX55P1-201ENST00000603334 MRC1P22897 1456 aa13.26□□□□□ -0.29
DDX55P1-201ENST00000603334 NFATC2IPQ8NCF5 419 aa13.26□□□□□ -0.29
DDX55P1-201ENST00000603334 MTFR1LQ9H019 292 aa13.26□□□□□ -0.29
DDX55P1-201ENST00000603334 ATG3Q9NT62 314 aa13.26□□□□□ -0.29
DDX55P1-201ENST00000603334 CICQ96RK0 1608 aaPredicted RBP13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 PLIN1O60240 522 aa13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 CANXP27824 592 aaKnown RBP13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 TEFQ10587 303 aa13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
DDX55P1-201ENST00000603334 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
DDX55P1-201ENST00000603334 BCAR3O75815 825 aa13.24□□□□□ -0.29
DDX55P1-201ENST00000603334 SIK1P57059 783 aa13.24□□□□□ -0.29
DDX55P1-201ENST00000603334 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
DDX55P1-201ENST00000603334 TJP1Q07157 1748 aa13.23□□□□□ -0.29
DDX55P1-201ENST00000603334 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
DDX55P1-201ENST00000603334 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
DDX55P1-201ENST00000603334 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 COL23A1Q86Y22 540 aaPredicted RBP13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 MIS18AQ9NYP9 233 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 TFCP2L1Q9NZI6 479 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 SIPA1L3O60292 1781 aaPredicted RBP13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 RARSP54136 660 aaKnown RBP13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 ITPK1Q13572 414 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 LINC00116Q8NCU8 138 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
DDX55P1-201ENST00000603334 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 C4AP0C0L4 1744 aa13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 CHL1O00533 1208 aa13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 ATP6V1AP38606 617 aa13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 TAF7Q15545 349 aaPredicted RBP13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 SMIM5Q71RC9 77 aa13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 BABAM1Q9NWV8 329 aa13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.3
DDX55P1-201ENST00000603334 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
DDX55P1-201ENST00000603334 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
DDX55P1-201ENST00000603334 SLC16A10Q8TF71 515 aa13.2□□□□□ -0.3
DDX55P1-201ENST00000603334 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
DDX55P1-201ENST00000603334 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
DDX55P1-201ENST00000603334 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
DDX55P1-201ENST00000603334 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
DDX55P1-201ENST00000603334 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
DDX55P1-201ENST00000603334 SYT17Q9BSW7 474 aa13.19□□□□□ -0.3
DDX55P1-201ENST00000603334 TEX13AQ9BXU3 409 aaPredicted RBP13.19□□□□□ -0.3
DDX55P1-201ENST00000603334 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
DDX55P1-201ENST00000603334 VAMP4O75379 141 aa13.18□□□□□ -0.3
DDX55P1-201ENST00000603334 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
DDX55P1-201ENST00000603334 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
DDX55P1-201ENST00000603334 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
DDX55P1-201ENST00000603334 KCPQ6ZWJ8 1503 aa13.17□□□□□ -0.3
DDX55P1-201ENST00000603334 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
DDX55P1-201ENST00000603334 EXOC6Q8TAG9 804 aa13.17□□□□□ -0.3
DDX55P1-201ENST00000603334 AK7Q96M32 723 aa13.17□□□□□ -0.3
DDX55P1-201ENST00000603334 ARXQ96QS3 562 aa13.17□□□□□ -0.3
DDX55P1-201ENST00000603334 CRBNQ96SW2 442 aa13.17□□□□□ -0.3
DDX55P1-201ENST00000603334 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
DDX55P1-201ENST00000603334 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
DDX55P1-201ENST00000603334 SSFA2P28290 1259 aa13.16□□□□□ -0.3
DDX55P1-201ENST00000603334 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
DDX55P1-201ENST00000603334 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
DDX55P1-201ENST00000603334 SLC39A6Q13433 755 aa13.15□□□□□ -0.3
DDX55P1-201ENST00000603334 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
DDX55P1-201ENST00000603334 C20orf194Q5TEA3 1177 aa13.15□□□□□ -0.3
DDX55P1-201ENST00000603334 ZKSCAN2Q63HK3 967 aa13.15□□□□□ -0.3
DDX55P1-201ENST00000603334 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
DDX55P1-201ENST00000603334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 STARD3NLO95772 234 aa13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 MS4A1P11836 297 aa13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 MSL1Q68DK7 614 aa13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 NOB1Q9ULX3 412 aaKnown RBP13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 KIAA1551Q9HCM1 1747 aa13.14□□□□□ -0.31
DDX55P1-201ENST00000603334 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 ZNF496Q96IT1 587 aaPredicted RBP13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 KIF13BQ9NQT8 1826 aa13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 CHD4Q14839 1912 aa13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 PHF14O94880 888 aa13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 B4GALNT3Q6L9W6 998 aa13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
DDX55P1-201ENST00000603334 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms