RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 TM4SF1P30408 202 aa20.89■□□□□ 0.93
CHCHD2P3-201ENST00000603038 RALBP1Q15311 655 aa20.89■□□□□ 0.93
CHCHD2P3-201ENST00000603038 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
CHCHD2P3-201ENST00000603038 PARP3Q9Y6F1 533 aa20.89■□□□□ 0.93
CHCHD2P3-201ENST00000603038 PRAMEF22A3QJZ6 481 aa20.88■□□□□ 0.93
CHCHD2P3-201ENST00000603038 GRIN3BO60391 1043 aa20.88■□□□□ 0.93
CHCHD2P3-201ENST00000603038 BCL2L12Q9HB09 334 aa20.88■□□□□ 0.93
CHCHD2P3-201ENST00000603038 MIS18AQ9NYP9 233 aa20.88■□□□□ 0.93
CHCHD2P3-201ENST00000603038 ZPR1O75312 459 aa20.87■□□□□ 0.93
CHCHD2P3-201ENST00000603038 STARD3NLO95772 234 aa20.87■□□□□ 0.93
CHCHD2P3-201ENST00000603038 A1BGP04217 495 aa20.87■□□□□ 0.93
CHCHD2P3-201ENST00000603038 EIF5P55010 431 aaKnown RBP20.87■□□□□ 0.93
CHCHD2P3-201ENST00000603038 FMNL2Q96PY5 1086 aa20.87■□□□□ 0.93
CHCHD2P3-201ENST00000603038 NARFQ9UHQ1 456 aa20.87■□□□□ 0.93
CHCHD2P3-201ENST00000603038 USP16Q9Y5T5 823 aa20.87■□□□□ 0.93
CHCHD2P3-201ENST00000603038 COL15A1P39059 1388 aa20.86■□□□□ 0.93
CHCHD2P3-201ENST00000603038 HTATSF1O43719 755 aaKnown RBP20.86■□□□□ 0.93
CHCHD2P3-201ENST00000603038 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
CHCHD2P3-201ENST00000603038 KIF13BQ9NQT8 1826 aa20.85■□□□□ 0.93
CHCHD2P3-201ENST00000603038 KIAA1551Q9HCM1 1747 aa20.85■□□□□ 0.93
CHCHD2P3-201ENST00000603038 DLG5Q8TDM6 1919 aa20.85■□□□□ 0.93
CHCHD2P3-201ENST00000603038 POLRMTO00411 1230 aaKnown RBP20.85■□□□□ 0.93
CHCHD2P3-201ENST00000603038 DPEP1P16444 411 aa20.85■□□□□ 0.93
CHCHD2P3-201ENST00000603038 THUMPD2Q9BTF0 503 aaKnown RBP20.85■□□□□ 0.93
CHCHD2P3-201ENST00000603038 PXDNLA1KZ92 1463 aa20.85■□□□□ 0.93
CHCHD2P3-201ENST00000603038 KCNA3P22001 575 aa20.84■□□□□ 0.93
CHCHD2P3-201ENST00000603038 PIP4K2AP48426 406 aaPredicted RBP20.84■□□□□ 0.93
CHCHD2P3-201ENST00000603038 TGFB2P61812 414 aa20.84■□□□□ 0.93
CHCHD2P3-201ENST00000603038 NFIXQ14938 502 aa20.84■□□□□ 0.93
CHCHD2P3-201ENST00000603038 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
CHCHD2P3-201ENST00000603038 C10orf71Q711Q0 1435 aa20.84■□□□□ 0.93
CHCHD2P3-201ENST00000603038 TAF7Q15545 349 aaPredicted RBP20.83■□□□□ 0.93
CHCHD2P3-201ENST00000603038 TBC1D2BQ9UPU7 963 aa20.83■□□□□ 0.93
CHCHD2P3-201ENST00000603038 NFE2L2Q16236 605 aa20.82■□□□□ 0.92
CHCHD2P3-201ENST00000603038 ZNF330Q9Y3S2 320 aaPredicted RBP20.82■□□□□ 0.92
CHCHD2P3-201ENST00000603038 NEFMP07197 916 aa20.8■□□□□ 0.92
CHCHD2P3-201ENST00000603038 BICDL1Q6ZP65 573 aa20.8■□□□□ 0.92
CHCHD2P3-201ENST00000603038 MYBBP1AQ9BQG0 1328 aaKnown RBP20.79■□□□□ 0.92
CHCHD2P3-201ENST00000603038 CHRNA5P30532 468 aa20.79■□□□□ 0.92
CHCHD2P3-201ENST00000603038 IL6STP40189 918 aaPredicted RBP20.79■□□□□ 0.92
CHCHD2P3-201ENST00000603038 BCS1LQ9Y276 419 aa20.79■□□□□ 0.92
CHCHD2P3-201ENST00000603038 SERPINB2P05120 415 aa20.78■□□□□ 0.92
CHCHD2P3-201ENST00000603038 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
CHCHD2P3-201ENST00000603038 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
CHCHD2P3-201ENST00000603038 AFDNP55196 1824 aaKnown RBP20.78■□□□□ 0.92
CHCHD2P3-201ENST00000603038 A0A087WZG4 1122 aa20.77■□□□□ 0.92
CHCHD2P3-201ENST00000603038 NBPF26B4DH59 902 aa20.77■□□□□ 0.92
CHCHD2P3-201ENST00000603038 NBPF10Q6P3W6 841 aaKnown RBP20.77■□□□□ 0.92
CHCHD2P3-201ENST00000603038 NBPF15Q8N660 670 aa20.77■□□□□ 0.92
CHCHD2P3-201ENST00000603038 CCDC146Q8IYE0 955 aa20.76■□□□□ 0.91
CHCHD2P3-201ENST00000603038 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
CHCHD2P3-201ENST00000603038 MAPK8IP3Q9UPT6 1336 aa20.76■□□□□ 0.91
CHCHD2P3-201ENST00000603038 CAMTA2O94983 1202 aa20.75■□□□□ 0.91
CHCHD2P3-201ENST00000603038 RIPK4P57078 832 aa20.75■□□□□ 0.91
CHCHD2P3-201ENST00000603038 PRKRIP1Q9H875 184 aaPredicted RBP20.75■□□□□ 0.91
CHCHD2P3-201ENST00000603038 BRCA1P38398 1863 aaKnown RBP20.74■□□□□ 0.91
CHCHD2P3-201ENST00000603038 TMPOP42166 694 aaKnown RBP20.74■□□□□ 0.91
CHCHD2P3-201ENST00000603038 CCDC24Q8N4L8 307 aa20.74■□□□□ 0.91
CHCHD2P3-201ENST00000603038 RRP7AQ9Y3A4 280 aaKnown RBP20.74■□□□□ 0.91
CHCHD2P3-201ENST00000603038 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
CHCHD2P3-201ENST00000603038 ARHGAP27Q6ZUM4 889 aa20.73■□□□□ 0.91
CHCHD2P3-201ENST00000603038 DZIP3Q86Y13 1208 aaKnown RBP20.73■□□□□ 0.91
CHCHD2P3-201ENST00000603038 PIM2Q9P1W9 311 aa20.73■□□□□ 0.91
CHCHD2P3-201ENST00000603038 ADAMTS8Q9UP79 889 aa20.73■□□□□ 0.91
CHCHD2P3-201ENST00000603038 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
CHCHD2P3-201ENST00000603038 NRXN2Q9P2S2 1712 aa20.71■□□□□ 0.91
CHCHD2P3-201ENST00000603038 GIGYF1O75420 1035 aaPredicted RBP20.71■□□□□ 0.91
CHCHD2P3-201ENST00000603038 NEUROD2Q15784 382 aa20.71■□□□□ 0.91
CHCHD2P3-201ENST00000603038 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
CHCHD2P3-201ENST00000603038 ATP10DQ9P241 1426 aa20.7■□□□□ 0.9
CHCHD2P3-201ENST00000603038 KDM3BQ7LBC6 1761 aa20.69■□□□□ 0.9
CHCHD2P3-201ENST00000603038 DALRD3Q5D0E6 543 aaKnown RBP20.69■□□□□ 0.9
CHCHD2P3-201ENST00000603038 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
CHCHD2P3-201ENST00000603038 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
CHCHD2P3-201ENST00000603038 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
CHCHD2P3-201ENST00000603038 ZNF526Q8TF50 670 aaPredicted RBP20.68■□□□□ 0.9
CHCHD2P3-201ENST00000603038 ADCY9O60503 1353 aa20.68■□□□□ 0.9
CHCHD2P3-201ENST00000603038 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
CHCHD2P3-201ENST00000603038 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
CHCHD2P3-201ENST00000603038 PRR5LQ6MZQ0 368 aa20.67■□□□□ 0.9
CHCHD2P3-201ENST00000603038 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
CHCHD2P3-201ENST00000603038 TRIM35Q9UPQ4 493 aa20.67■□□□□ 0.9
CHCHD2P3-201ENST00000603038 HLFQ16534 295 aa20.66■□□□□ 0.9
CHCHD2P3-201ENST00000603038 CCDC184Q52MB2 194 aa20.66■□□□□ 0.9
CHCHD2P3-201ENST00000603038 C2CD5Q86YS7 1000 aa20.66■□□□□ 0.9
CHCHD2P3-201ENST00000603038 SETDB2Q96T68 719 aa20.66■□□□□ 0.9
CHCHD2P3-201ENST00000603038 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
CHCHD2P3-201ENST00000603038 ARFGEF1Q9Y6D6 1849 aa20.65■□□□□ 0.9
CHCHD2P3-201ENST00000603038 ANKRD31Q8N7Z5 1873 aa20.64■□□□□ 0.9
CHCHD2P3-201ENST00000603038 BCORQ6W2J9 1755 aa20.64■□□□□ 0.89
CHCHD2P3-201ENST00000603038 MYL6BP14649 208 aa20.63■□□□□ 0.89
CHCHD2P3-201ENST00000603038 C1QTNF8P60827 252 aa20.63■□□□□ 0.89
CHCHD2P3-201ENST00000603038 CLEC4GQ6UXB4 293 aa20.63■□□□□ 0.89
CHCHD2P3-201ENST00000603038 TTLL7Q6ZT98 887 aa20.63■□□□□ 0.89
CHCHD2P3-201ENST00000603038 H0YIN7 160 aa20.62■□□□□ 0.89
CHCHD2P3-201ENST00000603038 BRIP1Q9BX63 1249 aa20.62■□□□□ 0.89
CHCHD2P3-201ENST00000603038 FAM177BA6PVY3 158 aa20.61■□□□□ 0.89
CHCHD2P3-201ENST00000603038 KRT24Q2M2I5 525 aa20.61■□□□□ 0.89
CHCHD2P3-201ENST00000603038 C9orf131Q5VYM1 1079 aa20.61■□□□□ 0.89
CHCHD2P3-201ENST00000603038 TTLL6Q8N841 843 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms