RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GET4Q7L5D6 327 aaPredicted RBP10.44□□□□□ -0.74
COMMD3-215ENST00000602574 BAG1Q99933 345 aaPredicted RBP10.44□□□□□ -0.74
COMMD3-215ENST00000602574 KDM5CP41229 1560 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 SMAPO00193 183 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 PES1O00541 588 aaKnown RBP10.44□□□□□ -0.74
COMMD3-215ENST00000602574 RAD21O60216 631 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 ACTN2P35609 894 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 PSMD2Q13200 908 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 RNF214Q8ND24 703 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 KCNV2Q8TDN2 545 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 C17orf50Q8WW18 174 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 UTP6Q9NYH9 597 aaKnown RBP10.44□□□□□ -0.74
COMMD3-215ENST00000602574 AKAP2Q9Y2D5 859 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 KIF7Q2M1P5 1343 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 ANKRD30BQ9BXX2 1392 aa10.43□□□□□ -0.74
COMMD3-215ENST00000602574 A0A087WUV0 522 aaPredicted RBP10.43□□□□□ -0.74
COMMD3-215ENST00000602574 THOC1Q96FV9 657 aaKnown RBP10.43□□□□□ -0.74
COMMD3-215ENST00000602574 PLEKHG4BQ96PX9 1271 aa10.43□□□□□ -0.74
COMMD3-215ENST00000602574 UTP14AQ9BVJ6 771 aaKnown RBP10.43□□□□□ -0.74
COMMD3-215ENST00000602574 MKRN1Q9UHC7 482 aaKnown RBP10.43□□□□□ -0.74
COMMD3-215ENST00000602574 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
COMMD3-215ENST00000602574 SCAF11Q99590 1463 aaKnown RBP10.43□□□□□ -0.74
COMMD3-215ENST00000602574 KIF15Q9NS87 1388 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 RBM47A0AV96 593 aaKnown RBP10.42□□□□□ -0.74
COMMD3-215ENST00000602574 PECAM1P16284 738 aaPredicted RBP10.42□□□□□ -0.74
COMMD3-215ENST00000602574 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
COMMD3-215ENST00000602574 ZKSCAN2Q63HK3 967 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 GBP6Q6ZN66 633 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 TCP11Q8WWU5 503 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 MCM8Q9UJA3 840 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 ARHGEF12Q9NZN5 1544 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 ANKRD36BQ8N2N9 1353 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 H7C1W4 665 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 OATP04181 439 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 H2AFXP16104 143 aaPredicted RBP10.42□□□□□ -0.74
COMMD3-215ENST00000602574 TMED1Q13445 227 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 TADA2BQ86TJ2 420 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 NBPF15Q8N660 670 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 CCDC112Q8NEF3 446 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 KCNB2Q92953 911 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 ADGBQ8N7X0 1667 aa10.42□□□□□ -0.74
COMMD3-215ENST00000602574 RTN2O75298 545 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.41□□□□□ -0.74
COMMD3-215ENST00000602574 C22orf23Q9BZE7 217 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 FHOD1Q9Y613 1164 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 PTPRGP23470 1445 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 UHRF1BP1Q6BDS2 1440 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
COMMD3-215ENST00000602574 FAM200BP0CF97 657 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 FBLN2P98095 1184 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 DDR1Q08345 913 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
COMMD3-215ENST00000602574 RHBDL3P58872 404 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 CCDC178Q5BJE1 867 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 CCDC181Q5TID7 509 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 FBXO38Q6PIJ6 1188 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 TDRD7Q8NHU6 1098 aaKnown RBP10.4□□□□□ -0.74
COMMD3-215ENST00000602574 MICAL1Q8TDZ2 1067 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 ST7Q9NRC1 585 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 HOMER3Q9NSC5 361 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.74
COMMD3-215ENST00000602574 ZSCAN9O15535 394 aaPredicted RBP10.4□□□□□ -0.75
COMMD3-215ENST00000602574 PLA2G4AP47712 749 aa10.4□□□□□ -0.75
COMMD3-215ENST00000602574 PSMC1P62191 440 aaKnown RBP10.4□□□□□ -0.75
COMMD3-215ENST00000602574 TSNAXIP1Q2TAA8 658 aa10.4□□□□□ -0.75
COMMD3-215ENST00000602574 HHATQ5VTY9 493 aa10.4□□□□□ -0.75
COMMD3-215ENST00000602574 SMARCE1Q969G3 411 aa10.4□□□□□ -0.75
COMMD3-215ENST00000602574 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.75
COMMD3-215ENST00000602574 RALGAPBQ86X10 1494 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 TESPA1A2RU30 521 aaPredicted RBP10.39□□□□□ -0.75
COMMD3-215ENST00000602574 IPO5O00410 1097 aaKnown RBP10.39□□□□□ -0.75
COMMD3-215ENST00000602574 BRD1O95696 1058 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 MNAT1P51948 309 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 EIF5P55010 431 aaKnown RBP10.39□□□□□ -0.75
COMMD3-215ENST00000602574 IFT88Q13099 833 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 ANKRD18AQ8IVF6 992 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 SAMD3Q8N6K7 520 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 RMDN2Q96LZ7 410 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 POLR3CQ9BUI4 534 aaPredicted RBP10.39□□□□□ -0.75
COMMD3-215ENST00000602574 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
COMMD3-215ENST00000602574 MBD3O95983 291 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 PNMA6AP0CW24 399 aaPredicted RBP10.38□□□□□ -0.75
COMMD3-215ENST00000602574 SFSWAPQ12872 951 aaKnown RBP10.38□□□□□ -0.75
COMMD3-215ENST00000602574 NUTM2GQ5VZR2 741 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 PMFBP1Q8TBY8 1022 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 SLC24A3Q9HC58 644 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 USP25Q9UHP3 1055 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 MTMR7Q9Y216 660 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 MYLK4Q86YV6 388 aaPredicted RBP10.38□□□□□ -0.75
COMMD3-215ENST00000602574 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 MPHOSPH9Q99550 1183 aa10.38□□□□□ -0.75
COMMD3-215ENST00000602574 RBM26Q5T8P6 1007 aaKnown RBP10.37□□□□□ -0.75
COMMD3-215ENST00000602574 MFSD4BQ5TF39 518 aa10.37□□□□□ -0.75
COMMD3-215ENST00000602574 SDCCAG8Q86SQ7 713 aaPredicted RBP10.37□□□□□ -0.75
COMMD3-215ENST00000602574 SMCR8Q8TEV9 937 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms