RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 CHRNA5P30532 468 aa27.29■■□□□ 1.96
PPFIA3-204ENST00000602492 NARFQ9UHQ1 456 aa27.29■■□□□ 1.96
PPFIA3-204ENST00000602492 ZBTB1Q9Y2K1 713 aa27.29■■□□□ 1.96
PPFIA3-204ENST00000602492 TOMM70O94826 608 aa27.27■■□□□ 1.96
PPFIA3-204ENST00000602492 NPC1L1Q9UHC9 1359 aa27.26■■□□□ 1.95
PPFIA3-204ENST00000602492 NFIXQ14938 502 aa27.26■■□□□ 1.95
PPFIA3-204ENST00000602492 TTC5Q8N0Z6 440 aa27.26■■□□□ 1.95
PPFIA3-204ENST00000602492 NMRK2Q9NPI5 230 aa27.26■■□□□ 1.95
PPFIA3-204ENST00000602492 U2SURPO15042 1029 aaKnown RBP27.25■■□□□ 1.95
PPFIA3-204ENST00000602492 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
PPFIA3-204ENST00000602492 CNGB1Q14028 1251 aaPredicted RBP27.24■■□□□ 1.95
PPFIA3-204ENST00000602492 STARD3NLO95772 234 aa27.23■■□□□ 1.95
PPFIA3-204ENST00000602492 GAS2L2Q8NHY3 880 aa27.23■■□□□ 1.95
PPFIA3-204ENST00000602492 RNF181Q9P0P0 153 aa27.23■■□□□ 1.95
PPFIA3-204ENST00000602492 UBR2Q8IWV8 1755 aa27.22■■□□□ 1.95
PPFIA3-204ENST00000602492 CANXP27824 592 aaKnown RBP27.22■■□□□ 1.95
PPFIA3-204ENST00000602492 APLP1P51693 650 aa27.22■■□□□ 1.95
PPFIA3-204ENST00000602492 TEFQ10587 303 aa27.22■■□□□ 1.95
PPFIA3-204ENST00000602492 BCL2L12Q9HB09 334 aa27.22■■□□□ 1.95
PPFIA3-204ENST00000602492 AFDNP55196 1824 aaKnown RBP27.2■■□□□ 1.95
PPFIA3-204ENST00000602492 GNAT3A8MTJ3 354 aa27.2■■□□□ 1.94
PPFIA3-204ENST00000602492 SERPINB2P05120 415 aa27.2■■□□□ 1.94
PPFIA3-204ENST00000602492 KDM2BQ8NHM5 1336 aa27.19■■□□□ 1.94
PPFIA3-204ENST00000602492 NRXN2Q9P2S2 1712 aa27.19■■□□□ 1.94
PPFIA3-204ENST00000602492 A0A087WZG4 1122 aa27.18■■□□□ 1.94
PPFIA3-204ENST00000602492 EIF5P55010 431 aaKnown RBP27.18■■□□□ 1.94
PPFIA3-204ENST00000602492 C16orf71Q8IYS4 520 aaPredicted RBP27.18■■□□□ 1.94
PPFIA3-204ENST00000602492 IL17REQ8NFR9 667 aa27.18■■□□□ 1.94
PPFIA3-204ENST00000602492 ZNF496Q96IT1 587 aaPredicted RBP27.18■■□□□ 1.94
PPFIA3-204ENST00000602492 IFFO2Q5TF58 517 aa27.17■■□□□ 1.94
PPFIA3-204ENST00000602492 ZNF790Q6PG37 636 aa27.17■■□□□ 1.94
PPFIA3-204ENST00000602492 RBM46Q8TBY0 533 aaKnown RBP27.17■■□□□ 1.94
PPFIA3-204ENST00000602492 HEG1Q9ULI3 1381 aa27.17■■□□□ 1.94
PPFIA3-204ENST00000602492 TEX13AQ9BXU3 409 aaPredicted RBP27.16■■□□□ 1.94
PPFIA3-204ENST00000602492 BICDL1Q6ZP65 573 aa27.14■■□□□ 1.94
PPFIA3-204ENST00000602492 C2CD5Q86YS7 1000 aa27.14■■□□□ 1.94
PPFIA3-204ENST00000602492 TTLL6Q8N841 843 aa27.14■■□□□ 1.94
PPFIA3-204ENST00000602492 SBF1O95248 1867 aa27.13■■□□□ 1.93
PPFIA3-204ENST00000602492 CFAP53Q96M91 514 aa27.13■■□□□ 1.93
PPFIA3-204ENST00000602492 H0YIN7 160 aa27.12■■□□□ 1.93
PPFIA3-204ENST00000602492 RASSF7Q02833 373 aa27.12■■□□□ 1.93
PPFIA3-204ENST00000602492 FMNL2Q96PY5 1086 aa27.12■■□□□ 1.93
PPFIA3-204ENST00000602492 ZNF330Q9Y3S2 320 aaPredicted RBP27.12■■□□□ 1.93
PPFIA3-204ENST00000602492 ZC3H4Q9UPT8 1303 aaKnown RBP27.12■■□□□ 1.93
PPFIA3-204ENST00000602492 CARMIL3Q8ND23 1372 aa27.11■■□□□ 1.93
PPFIA3-204ENST00000602492 SIPA1L3O60292 1781 aaPredicted RBP27.11■■□□□ 1.93
PPFIA3-204ENST00000602492 DLEC1Q9Y238 1755 aa27.11■■□□□ 1.93
PPFIA3-204ENST00000602492 CEMIPQ8WUJ3 1361 aa27.1■■□□□ 1.93
PPFIA3-204ENST00000602492 LMNB1P20700 586 aa27.1■■□□□ 1.93
PPFIA3-204ENST00000602492 PRKAR2BP31323 418 aa27.1■■□□□ 1.93
PPFIA3-204ENST00000602492 IL6STP40189 918 aaPredicted RBP27.1■■□□□ 1.93
PPFIA3-204ENST00000602492 RRAGCQ9HB90 399 aa27.1■■□□□ 1.93
PPFIA3-204ENST00000602492 FSTL1Q12841 308 aa27.09■■□□□ 1.93
PPFIA3-204ENST00000602492 TBC1D9BQ66K14 1250 aa27.09■■□□□ 1.93
PPFIA3-204ENST00000602492 NPM2Q86SE8 214 aaKnown RBP27.09■■□□□ 1.93
PPFIA3-204ENST00000602492 PHACTR3Q96KR7 559 aa27.09■■□□□ 1.93
PPFIA3-204ENST00000602492 TBC1D2BQ9UPU7 963 aa27.09■■□□□ 1.93
PPFIA3-204ENST00000602492 DNAJC5GQ8N7S2 189 aa27.08■■□□□ 1.93
PPFIA3-204ENST00000602492 RSPH6AQ9H0K4 717 aa27.08■■□□□ 1.93
PPFIA3-204ENST00000602492 SCN7AQ01118 1682 aa27.08■■□□□ 1.92
PPFIA3-204ENST00000602492 TNRC6CQ9HCJ0 1690 aaKnown RBP27.08■■□□□ 1.92
PPFIA3-204ENST00000602492 BTBD11A6QL63 1104 aa27.07■■□□□ 1.92
PPFIA3-204ENST00000602492 PDZRN3Q9UPQ7 1066 aa27.07■■□□□ 1.92
PPFIA3-204ENST00000602492 NUDCQ9Y266 331 aa27.07■■□□□ 1.92
PPFIA3-204ENST00000602492 A1BGP04217 495 aa27.06■■□□□ 1.92
PPFIA3-204ENST00000602492 PDE6BP35913 854 aa27.05■■□□□ 1.92
PPFIA3-204ENST00000602492 BRIP1Q9BX63 1249 aa27.05■■□□□ 1.92
PPFIA3-204ENST00000602492 KCNQ3O43525 872 aa27.04■■□□□ 1.92
PPFIA3-204ENST00000602492 PRR5LQ6MZQ0 368 aa27.04■■□□□ 1.92
PPFIA3-204ENST00000602492 ZNF622Q969S3 477 aaKnown RBP eCLIP27.04■■□□□ 1.92
PPFIA3-204ENST00000602492 WDR90Q96KV7 1748 aa27.04■■□□□ 1.92
PPFIA3-204ENST00000602492 NFKBIEO00221 500 aa27.03■■□□□ 1.92
PPFIA3-204ENST00000602492 PRELPP51888 382 aa27.03■■□□□ 1.92
PPFIA3-204ENST00000602492 GLTPD2A6NH11 291 aa27.02■■□□□ 1.92
PPFIA3-204ENST00000602492 CAMTA2O94983 1202 aa27.02■■□□□ 1.92
PPFIA3-204ENST00000602492 SETDB2Q96T68 719 aa27.02■■□□□ 1.92
PPFIA3-204ENST00000602492 ANKRD31Q8N7Z5 1873 aa27.02■■□□□ 1.92
PPFIA3-204ENST00000602492 NPHP1O15259 732 aa27.01■■□□□ 1.91
PPFIA3-204ENST00000602492 U2AF1L5P0DN76 240 aaPredicted RBP27.01■■□□□ 1.91
PPFIA3-204ENST00000602492 U2AF1Q01081 240 aaKnown RBP eCLIP27.01■■□□□ 1.91
PPFIA3-204ENST00000602492 CCDC24Q8N4L8 307 aa27.01■■□□□ 1.91
PPFIA3-204ENST00000602492 SMC1BQ8NDV3 1235 aa27.01■■□□□ 1.91
PPFIA3-204ENST00000602492 RTF1Q92541 710 aaKnown RBP27.01■■□□□ 1.91
PPFIA3-204ENST00000602492 CNBD1Q8NA66 436 aa27■■□□□ 1.91
PPFIA3-204ENST00000602492 VEGFAP15692 232 aaPredicted RBP26.99■■□□□ 1.91
PPFIA3-204ENST00000602492 PPP2R1AP30153 589 aa26.99■■□□□ 1.91
PPFIA3-204ENST00000602492 DZIP3Q86Y13 1208 aaKnown RBP26.99■■□□□ 1.91
PPFIA3-204ENST00000602492 ST5P78524 1137 aa26.98■■□□□ 1.91
PPFIA3-204ENST00000602492 HTRA3P83110 453 aa26.98■■□□□ 1.91
PPFIA3-204ENST00000602492 ZNF219Q9P2Y4 722 aaPredicted RBP26.98■■□□□ 1.91
PPFIA3-204ENST00000602492 USP16Q9Y5T5 823 aa26.98■■□□□ 1.91
PPFIA3-204ENST00000602492 TIAM2Q8IVF5 1701 aa26.97■■□□□ 1.91
PPFIA3-204ENST00000602492 C21orf2O43822 256 aa26.97■■□□□ 1.91
PPFIA3-204ENST00000602492 MCM10Q7L590 875 aa26.97■■□□□ 1.91
PPFIA3-204ENST00000602492 KLRG1Q96E93 195 aa26.97■■□□□ 1.91
PPFIA3-204ENST00000602492 CCDC88AQ3V6T2 1871 aa26.97■■□□□ 1.91
PPFIA3-204ENST00000602492 COL11A2P13942 1736 aaPredicted RBP26.96■■□□□ 1.91
PPFIA3-204ENST00000602492 SNRPA1P09661 255 aaKnown RBP26.96■■□□□ 1.91
PPFIA3-204ENST00000602492 PIP4K2AP48426 406 aaPredicted RBP26.95■■□□□ 1.9
PPFIA3-204ENST00000602492 BCORQ6W2J9 1755 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms